RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, human

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HFM1-208	ENST00000488023	ACOT7	O00154	380 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	EIF3F	O00303	357 aa	Predicted RBP	4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	ELL2	O00472	640 aa	Predicted RBP	4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	SLC27A2	O14975	620 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	CSTB	P04080	98 aa	Known RBP	4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	DHRS4L1	P0CG22	281 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	TSHR	P16473	764 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	ZNF28	P17035	718 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	TEC	P42680	631 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	MRPS9	P82933	396 aa	Known RBP	4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	NUCB1	Q02818	461 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	GALNT1	Q10472	559 aa	Predicted RBP	4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	MYBPC2	Q14324	1141 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	STARD3	Q14849	445 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	CCDC96	Q2M329	555 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	PRR16	Q569H4	304 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	KLHDC7A	Q5VTJ3	777 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	RETSAT	Q6NUM9	610 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	MZT2B	Q6NZ67	158 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	ZZZ3	Q8IYH5	903 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	ZNF527	Q8NB42	609 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	GIMAP8	Q8ND71	665 aa	Predicted RBP	4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	KAT5	Q92993	513 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	APIP	Q96GX9	242 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	TTLL2	Q9BWV7	592 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	ZMAT3	Q9HA38	289 aa	Known RBP	4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	KIAA1586	Q9HCI6	787 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	STARD7	Q9NQZ5	370 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	STAP2	Q9UGK3	403 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	KCNG1	Q9UIX4	513 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	STXBP5L	Q9Y2K9	1186 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	HS3ST3A1	Q9Y663	406 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	NPEPPSL1	A6NEC2	478 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	TISP43	B9A030	160 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023		B9A039	149 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023		F8W8V4	182 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	ADAMTS3	O15072	1205 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	GPR42	O15529	346 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	CLASP2	O75122	1294 aa	Known RBP	4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	FGF18	O76093	207 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	MAP2K6	P52564	334 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	SLC5A3	P53794	718 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	SLC16A1	P53985	500 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	LGALS4	P56470	323 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	RAB1A	P62820	205 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	IL10RA	Q13651	578 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	PDE1C	Q14123	709 aa	Predicted RBP	4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	TRIM25	Q14258	630 aa	Known RBP	4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	POSTN	Q15063	836 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	NBPF8	Q3BBV2	869 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	CATSPERE	Q5SY80	951 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	C1QTNF12	Q5T7M4	302 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	VPS53	Q5VIR6	699 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	PRAMEF18	Q5VWM3	479 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	EP400NL	Q6ZTU2	488 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	KCTD1	Q719H9	257 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	PLEKHH3	Q7Z736	793 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	PROSER1	Q86XN7	944 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	SYTL1	Q8IYJ3	562 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	CNPY4	Q8N129	248 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	CCDC33	Q8N5R6	958 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	DNER	Q8NFT8	737 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	NRG4	Q8WWG1	115 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	AUTS2	Q8WXX7	1259 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	DPF2	Q92785	391 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	TMEM41A	Q96HV5	264 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	SORBS1	Q9BX66	1292 aa	Known RBP	4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	SLC26A6	Q9BXS9	759 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	BTBD1	Q9H0C5	482 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	KCTD10	Q9H3F6	313 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	IFT122	Q9HBG6	1241 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	WASF3	Q9UPY6	502 aa		4.22	□□□□□ -1.73
HFM1-208	ENST00000488023	USP19	O94966	1318 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	LRRC14B	A6NHZ5	514 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	CNOT4	O95628	575 aa	Known RBP	4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	C4BPA	P04003	597 aa	Known RBP	4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	HARS	P12081	509 aa	Known RBP	4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	MTHFD2	P13995	350 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	MCC	P23508	829 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	CNTF	P26441	200 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	IL13	P35225	146 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	HSPA7	P48741	367 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	BCAR1	P56945	870 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	CNGB1	Q14028	1251 aa	Predicted RBP	4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	ALDH1L2	Q3SY69	923 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	PAN2	Q504Q3	1202 aa	Known RBP	4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	FIGN	Q5HY92	759 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	FKBP15	Q5T1M5	1219 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	AGAP9	Q5VTM2	703 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	FAAH2	Q6GMR7	532 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	ZNF585A	Q6P3V2	769 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	PGBD2	Q6P3X8	592 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	LYSMD2	Q8IV50	215 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	CACNA2D3	Q8IZS8	1091 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	OR8H2	Q8N162	312 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	RNF152	Q8N8N0	203 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	ATG16L2	Q8NAA4	619 aa		4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	SNRNP27	Q8WVK2	155 aa	Known RBP	4.21	□□□□□ -1.74
HFM1-208	ENST00000488023	RPGR	Q92834	1020 aa	Known RBP	4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms