RNA–Protein interactions for RNA: ENST00000487935.1

OPTN-212, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 511 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-212ENST00000487935 CCL16O15467 120 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 ADAM12O43184 909 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 TRAPPC3O43617 180 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 XYLBO75191 536 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 B3GAT3O94766 335 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 FGFR3P22607 806 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 CLCNKBP51801 687 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 RAB33AQ14088 237 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 UVSSAQ2YD98 709 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 GLRA4Q5JXX5 417 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 PHLDB3Q6NSJ2 640 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 DCLRE1AQ6PJP8 1040 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 SNX29Q8TEQ0 813 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 UROC1Q96N76 676 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 PPP1R10Q96QC0 940 aaKnown RBP13.39□□□□□ -0.27
OPTN-212ENST00000487935 TBC1D17Q9HA65 648 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 SLC2A4RGQ9NR83 387 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 DDX19AQ9NUU7 478 aaKnown RBP13.39□□□□□ -0.27
OPTN-212ENST00000487935 CDH7Q9ULB5 785 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 POLIQ9UNA4 740 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 TNFSF13BQ9Y275 285 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 VWA8A3KMH1 1905 aa13.39□□□□□ -0.27
OPTN-212ENST00000487935 VPS13AQ96RL7 3174 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 CCDC169A6NNP5 214 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 POU2F2P09086 479 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 OR1D2P34982 312 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 DDIT3P35638 169 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 GRM5P41594 1212 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 YARSP54577 528 aaKnown RBP13.38□□□□□ -0.27
OPTN-212ENST00000487935 PEX3P56589 373 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 NTHL1P78549 312 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 PTGDRQ13258 359 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 UPP1Q16831 310 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 AXDND1Q5T1B0 1012 aaPredicted RBP13.38□□□□□ -0.27
OPTN-212ENST00000487935 MTSS1LQ765P7 747 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 RTL10Q7L3V2 364 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 IGSF22Q8N9C0 903 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 SLC7A14Q8TBB6 771 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 ZNF396Q96N95 335 aaPredicted RBP13.38□□□□□ -0.27
OPTN-212ENST00000487935 CCDC94Q9BW85 323 aaPredicted RBP13.38□□□□□ -0.27
OPTN-212ENST00000487935 TMEM134Q9H6X4 195 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 ARHGEF3Q9NR81 526 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.38□□□□□ -0.27
OPTN-212ENST00000487935 TOPORSQ9NS56 1045 aaPredicted RBP13.38□□□□□ -0.27
OPTN-212ENST00000487935 MTRRQ9UBK8 725 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 CIZ1Q9ULV3 898 aaPredicted RBP13.38□□□□□ -0.27
OPTN-212ENST00000487935 DNM3Q9UQ16 869 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 ZDHHC9Q9Y397 364 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 PHLPP2Q6ZVD8 1323 aa13.38□□□□□ -0.27
OPTN-212ENST00000487935 SMIM28A0A1B0GU29 152 aa13.37□□□□□ -0.27
OPTN-212ENST00000487935 NPTX2P47972 431 aa13.37□□□□□ -0.27
OPTN-212ENST00000487935 CEBPZQ03701 1054 aaKnown RBP13.37□□□□□ -0.27
OPTN-212ENST00000487935 DMP1Q13316 513 aaPredicted RBP13.37□□□□□ -0.27
OPTN-212ENST00000487935 KRT79Q5XKE5 535 aa13.37□□□□□ -0.27
OPTN-212ENST00000487935 PARM1Q6UWI2 310 aa13.37□□□□□ -0.27
OPTN-212ENST00000487935 ANKS3Q6ZW76 656 aa13.37□□□□□ -0.27
OPTN-212ENST00000487935 ST13P5Q8NFI4 369 aaPredicted RBP13.37□□□□□ -0.27
OPTN-212ENST00000487935 FGF13Q92913 245 aa13.37□□□□□ -0.27
OPTN-212ENST00000487935 FGF14Q92915 247 aa13.37□□□□□ -0.27
OPTN-212ENST00000487935 SHDQ96IW2 340 aa13.37□□□□□ -0.27
OPTN-212ENST00000487935 USP28Q96RU2 1077 aa13.37□□□□□ -0.27
OPTN-212ENST00000487935 ACO2Q99798 780 aaKnown RBP13.37□□□□□ -0.27
OPTN-212ENST00000487935 RPP25Q9BUL9 199 aaKnown RBP13.37□□□□□ -0.27
OPTN-212ENST00000487935 MRPL4Q9BYD3 311 aaKnown RBP13.37□□□□□ -0.27
OPTN-212ENST00000487935 CDT1Q9H211 546 aa13.37□□□□□ -0.27
OPTN-212ENST00000487935 GOLGA2P5Q9HBQ8 144 aa13.37□□□□□ -0.27
OPTN-212ENST00000487935 KMT5AQ9NQR1 393 aa13.37□□□□□ -0.27
OPTN-212ENST00000487935 CHMP5Q9NZZ3 219 aa13.37□□□□□ -0.27
OPTN-212ENST00000487935 SIT1Q9Y3P8 196 aa13.37□□□□□ -0.27
OPTN-212ENST00000487935 BACE2Q9Y5Z0 518 aa13.37□□□□□ -0.27
OPTN-212ENST00000487935 CDY1Q9Y6F8 540 aa13.37□□□□□ -0.27
OPTN-212ENST00000487935 TRIP11Q15643 1979 aa13.37□□□□□ -0.27
OPTN-212ENST00000487935 CACNA1HO95180 2353 aa13.37□□□□□ -0.27
OPTN-212ENST00000487935 DOCK6Q96HP0 2047 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 E9PMD0 336 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 LAD1O00515 517 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 HIP1RO75146 1068 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 BMP15O95972 392 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 DCNP07585 359 aaKnown RBP13.36□□□□□ -0.27
OPTN-212ENST00000487935 IGFBP6P24592 240 aaPredicted RBP13.36□□□□□ -0.27
OPTN-212ENST00000487935 TKTP29401 623 aaKnown RBP13.36□□□□□ -0.27
OPTN-212ENST00000487935 BRCC3P46736 316 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 OSTNP61366 133 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 GPC5P78333 572 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 SF3A1Q15459 793 aaKnown RBP13.36□□□□□ -0.27
OPTN-212ENST00000487935 ZNF568Q3ZCX4 644 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 PABPC1LQ4VXU2 614 aaKnown RBP13.36□□□□□ -0.27
OPTN-212ENST00000487935 XKR4Q5GH76 650 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 SPECC1Q5M775 1068 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 CD300LGQ6UXG3 332 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 ADSSL1Q8N142 457 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 CEP120Q8N960 986 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 C3orf58Q8NDZ4 430 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 ITFG1Q8TB96 612 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 DDX27Q96GQ7 796 aaKnown RBP13.36□□□□□ -0.27
OPTN-212ENST00000487935 DRC1Q96MC2 740 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 PTPRHQ9HD43 1115 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 SLC38A7Q9NVC3 462 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 ARHGAP28Q9P2N2 729 aa13.36□□□□□ -0.27
OPTN-212ENST00000487935 DNMT3BQ9UBC3 853 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms