RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 MCCP23508 829 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 RPL10P27635 214 aaKnown RBP5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 CFPP27918 469 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 CTSKP43235 329 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 TDO2P48775 406 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 NASPP49321 788 aaPredicted RBP5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 ALDH5A1P51649 535 aaPredicted RBP5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 PCBP3P57721 371 aaKnown RBP5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 PPARAQ07869 468 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 GRB10Q13322 594 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 BAATQ14032 418 aaPredicted RBP5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 GPNMBQ14956 572 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 BBS9Q3SYG4 887 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 TIGD5Q53EQ6 642 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 BRDTQ58F21 947 aaPredicted RBP5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 AXDND1Q5T1B0 1012 aaPredicted RBP5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 CCDC62Q6P9F0 684 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 PRR23BQ6ZRT6 265 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 FBXO16Q8IX29 292 aaPredicted RBP5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 LRRC56Q8IYG6 542 aaPredicted RBP5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 DNERQ8NFT8 737 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 CAGE1Q8TC20 777 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 AFAP1L1Q8TED9 768 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 SCFD2Q8WU76 684 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 DCAF4Q8WV16 495 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 CLEC4DQ8WXI8 215 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 CTAGE1Q96RT6 745 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 CRBNQ96SW2 442 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 DCTPP1Q9H773 170 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 TCP11L1Q9NUJ3 509 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 CCPG1Q9ULG6 757 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 INPP5FQ9Y2H2 1132 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 TTC41PQ6P2S7 1318 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 WDR19Q8NEZ3 1342 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 RAD50Q92878 1312 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 SCN5AQ14524 2016 aa5.98□□□□□ -1.45
R3HDM1-218ENST00000487294 FITM1A5D6W6 292 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 RFXAPO00287 272 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 NFIBO00712 420 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 EFCAB14O75071 495 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 SYPP08247 313 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 SNHG28P0DPA3 235 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 ERVK-21P61565 698 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 NR0B2Q15466 257 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 ALX1Q15699 326 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 LEXMQ3ZCV2 418 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 ANKRD39Q53RE8 183 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 MPZL3Q6UWV2 235 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 ZPBP2Q6X784 338 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 KCTD1Q719H9 257 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 EEPD1Q7L9B9 569 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 OXR1Q8N573 874 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 GPATCH3Q96I76 525 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 SHDQ96IW2 340 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 MPHOSPH6Q99547 160 aaKnown RBP5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 SRRTQ9BXP5 876 aaKnown RBP5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 NAPBQ9H115 298 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 KCNH6Q9H252 994 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 FAM86C1Q9NVL1 165 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 PRR13Q9NZ81 148 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 STX8Q9UNK0 236 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 DDX49Q9Y6V7 483 aaKnown RBP5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 COL4A6Q14031 1691 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 PTPRSQ13332 1948 aa5.97□□□□□ -1.45
R3HDM1-218ENST00000487294 ABHD14A-ACY1A0A1B0GW23 586 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 A0A1W2PQH9 124 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 SSU72P8A0A1W2PR75 194 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 NOTOA8MTQ0 251 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 B4DLN1 442 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 GJB5O95377 273 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 TP53P04637 393 aaPredicted RBP5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 APPP05067 770 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 PCP11498 1178 aaKnown RBP5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 NT5C2P49902 561 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 MRPL12P52815 198 aaKnown RBP5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 WDR5P61964 334 aaKnown RBP5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 RPS6P62753 249 aaKnown RBP5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 DUSP4Q13115 394 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 PPP2R5BQ15173 497 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 SYDE2Q5VT97 1194 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 KRT40Q6A162 431 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 CNKSR3Q6P9H4 555 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 NSMFQ6X4W1 530 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 RNF207Q6ZRF8 634 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 LCNL1Q6ZST4 164 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 SYDE1Q6ZW31 735 aaPredicted RBP5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 DEFB128Q7Z7B8 93 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 FAM178BQ8IXR5 827 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 ANKS4BQ8N8V4 417 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 OR6J1Q8NGC5 347 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 ARNTL2Q8WYA1 636 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 SEC16BQ96JE7 1060 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 TTC14Q96N46 770 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 RAD9AQ99638 391 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 RNF32Q9H0A6 362 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 CCSER2Q9H7U1 834 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 CD320Q9NPF0 282 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 ZMYM6O95789 1325 aa5.96□□□□□ -1.46
R3HDM1-218ENST00000487294 COL4A4P53420 1690 aaPredicted RBP5.95□□□□□ -1.46
R3HDM1-218ENST00000487294 LCHNA4D1U4 455 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms