RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 TRIP12Q14669 1992 aaPredicted RBP8.66□□□□□ -1.02
ZNF541-204ENST00000487275 TFRCP02786 760 aaKnown RBP8.66□□□□□ -1.02
ZNF541-204ENST00000487275 SERPING1P05155 500 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 CCDC172P0C7W6 258 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 GHRP10912 638 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 FERP16591 822 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 ZSCAN20P17040 1043 aaPredicted RBP8.66□□□□□ -1.02
ZNF541-204ENST00000487275 SOX5P35711 763 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 CTCFP49711 727 aaPredicted RBP8.66□□□□□ -1.02
ZNF541-204ENST00000487275 LBX1P52954 281 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 MFAP3P55082 362 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 JAM2P57087 298 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 ARID5AQ03989 594 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 KLHL30Q0D2K2 578 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 PAK2Q13177 524 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 NCOA4Q13772 614 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 MTF1Q14872 753 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 TMEM132DQ14C87 1099 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 TRIM71Q2Q1W2 868 aaKnown RBP8.66□□□□□ -1.02
ZNF541-204ENST00000487275 SLC10A6Q3KNW5 377 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 FAM26DQ5JW98 314 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 ZNF618Q5T7W0 954 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 E4F1Q66K89 784 aaPredicted RBP8.66□□□□□ -1.02
ZNF541-204ENST00000487275 TOGARAM2Q6ZUX3 1019 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 TRAPPC11Q7Z392 1133 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 NT5DC4Q86YG4 428 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 GPIHBP1Q8IV16 184 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 ARHGEF19Q8IW93 802 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 EFCAB13Q8IY85 973 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 HACE1Q8IYU2 909 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 CCAR2Q8N163 923 aaKnown RBP8.66□□□□□ -1.02
ZNF541-204ENST00000487275 DHX38Q92620 1227 aaKnown RBP8.66□□□□□ -1.02
ZNF541-204ENST00000487275 CCDC42Q96M95 316 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 PI4K2AQ9BTU6 479 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 APOL6Q9BWW8 343 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 TRPV6Q9H1D0 765 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 PLEKHA5Q9HAU0 1116 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 CHST12Q9NRB3 414 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 AIPL1Q9NZN9 384 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 ST3GAL5Q9UNP4 418 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 PPP2R2CQ9Y2T4 447 aa8.66□□□□□ -1.02
ZNF541-204ENST00000487275 R3HCC1Q9Y3T6 440 aaKnown RBP8.66□□□□□ -1.02
ZNF541-204ENST00000487275 BZW2Q9Y6E2 419 aaKnown RBP8.66□□□□□ -1.02
ZNF541-204ENST00000487275 EPN1Q9Y6I3 576 aaPredicted RBP8.66□□□□□ -1.02
ZNF541-204ENST00000487275 SSU72P8A0A1W2PR75 194 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 F8VZ95 297 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 TLR3O15455 904 aaKnown RBP8.65□□□□□ -1.02
ZNF541-204ENST00000487275 AKR1B10O60218 316 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 LRRN2O75325 713 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 OFD1O75665 1012 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 RECQL4O94761 1208 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 GFPT2O94808 682 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 NDUFA10O95299 355 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 VNN1O95497 513 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 NFICP08651 508 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 KRT19P08727 400 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 CCDC175P0C221 793 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 HSPA1AP0DMV8 641 aaKnown RBP8.65□□□□□ -1.02
ZNF541-204ENST00000487275 HSPA1BP0DMV9 641 aaKnown RBP8.65□□□□□ -1.02
ZNF541-204ENST00000487275 CKBP12277 381 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 EIF4A3P38919 411 aaKnown RBP8.65□□□□□ -1.02
ZNF541-204ENST00000487275 NOP14P78316 857 aaKnown RBP8.65□□□□□ -1.02
ZNF541-204ENST00000487275 KRT83P78385 493 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 MAPK8IP2Q13387 824 aaPredicted RBP8.65□□□□□ -1.02
ZNF541-204ENST00000487275 BFSP2Q13515 415 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 SPA17Q15506 151 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 FBXO47Q5MNV8 452 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 UBXN11Q5T124 520 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 JADE1Q6IE81 842 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 ENOSF1Q7L5Y1 443 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 VPS36Q86VN1 386 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 USP38Q8NB14 1042 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 ACRBPQ8NEB7 543 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 CAGE1Q8TC20 777 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 HELQQ8TDG4 1101 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 U2AF1L4Q8WU68 220 aaKnown RBP8.65□□□□□ -1.02
ZNF541-204ENST00000487275 TATDN2Q93075 761 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 KIF12Q96FN5 646 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 ZNF333Q96JL9 665 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 SNX27Q96L92 541 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 DESI2Q9BSY9 194 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 NXF3Q9H4D5 531 aaKnown RBP8.65□□□□□ -1.02
ZNF541-204ENST00000487275 HAUS4Q9H6D7 363 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 AGO3Q9H9G7 860 aaKnown RBP8.65□□□□□ -1.02
ZNF541-204ENST00000487275 ERVK-5Q9HDB9 667 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 KCND1Q9NSA2 647 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 SPTLC3Q9NUV7 552 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 ARHGAP20Q9P2F6 1191 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 PARP2Q9UGN5 583 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 DERAQ9Y315 318 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 C2CD2Q9Y426 696 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 HES2Q9Y543 173 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 IPPQ9Y573 584 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 ADGRG1Q9Y653 693 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 SQORQ9Y6N5 450 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 FRMPD3Q5JV73 1810 aa8.65□□□□□ -1.02
ZNF541-204ENST00000487275 GOLGA6L9A6NEM1 432 aa8.64□□□□□ -1.03
ZNF541-204ENST00000487275 USP27XA6NNY8 438 aa8.64□□□□□ -1.03
ZNF541-204ENST00000487275 EIF3CLB5ME19 914 aaKnown RBP8.64□□□□□ -1.03
ZNF541-204ENST00000487275 FOXN3O00409 490 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms