RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ANKRD1Q15327 319 aa21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 DCAF4L1Q3SXM0 396 aa21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 PADI6Q6TGC4 694 aa21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 CD300LGQ6UXG3 332 aa21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 RTL10Q7L3V2 364 aa21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 DEPTORQ8TB45 409 aa21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 GTF3C6Q969F1 213 aa21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 PPP1R10Q96QC0 940 aaKnown RBP21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 POLR3CQ9BUI4 534 aaPredicted RBP21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 MRPS23Q9Y3D9 190 aaKnown RBP21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 BACE2Q9Y5Z0 518 aa21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 CYP11B2P19099 503 aa21.42■■□□□ 1.02
SMPDL3A-202ENST00000487215 TARSP26639 723 aaKnown RBP21.42■■□□□ 1.02
SMPDL3A-202ENST00000487215 TKTP29401 623 aaKnown RBP21.42■■□□□ 1.02
SMPDL3A-202ENST00000487215 MCM7P33993 719 aa21.42■■□□□ 1.02
SMPDL3A-202ENST00000487215 ME3Q16798 604 aa21.42■■□□□ 1.02
SMPDL3A-202ENST00000487215 SLC5A9Q2M3M2 681 aa21.42■■□□□ 1.02
SMPDL3A-202ENST00000487215 VARS2Q5ST30 1063 aaKnown RBP21.42■■□□□ 1.02
SMPDL3A-202ENST00000487215 ZBTB41Q5SVQ8 909 aa21.42■■□□□ 1.02
SMPDL3A-202ENST00000487215 TPRG1Q6ZUI0 275 aa21.42■■□□□ 1.02
SMPDL3A-202ENST00000487215 NSUN7Q8NE18 718 aaKnown RBP21.42■■□□□ 1.02
SMPDL3A-202ENST00000487215 MCRS1Q96EZ8 462 aa21.42■■□□□ 1.02
SMPDL3A-202ENST00000487215 DDX27Q96GQ7 796 aaKnown RBP21.42■■□□□ 1.02
SMPDL3A-202ENST00000487215 BORCS6Q96GS4 357 aa21.42■■□□□ 1.02
SMPDL3A-202ENST00000487215 NOTCH4Q99466 2003 aa21.42■■□□□ 1.02
SMPDL3A-202ENST00000487215 KIFC3Q9BVG8 833 aa21.42■■□□□ 1.02
SMPDL3A-202ENST00000487215 NCDNQ9UBB6 729 aa21.42■■□□□ 1.02
SMPDL3A-202ENST00000487215 PCDHGA2Q9Y5H1 932 aa21.42■■□□□ 1.02
SMPDL3A-202ENST00000487215 ARHGEF35A5YM69 484 aa21.41■■□□□ 1.02
SMPDL3A-202ENST00000487215 I3L4J1 428 aa21.41■■□□□ 1.02
SMPDL3A-202ENST00000487215 ECI2O75521 394 aa21.41■■□□□ 1.02
SMPDL3A-202ENST00000487215 RHOP08100 348 aa21.41■■□□□ 1.02
SMPDL3A-202ENST00000487215 UPP1Q16831 310 aa21.41■■□□□ 1.02
SMPDL3A-202ENST00000487215 RSPO4Q2I0M5 234 aaPredicted RBP21.41■■□□□ 1.02
SMPDL3A-202ENST00000487215 POTEHQ6S545 545 aa21.41■■□□□ 1.02
SMPDL3A-202ENST00000487215 ZBTB44Q8NCP5 570 aa21.41■■□□□ 1.02
SMPDL3A-202ENST00000487215 C3orf58Q8NDZ4 430 aa21.41■■□□□ 1.02
SMPDL3A-202ENST00000487215 CLDN23Q96B33 292 aa21.41■■□□□ 1.02
SMPDL3A-202ENST00000487215 PLA2G2FQ9BZM2 168 aa21.41■■□□□ 1.02
SMPDL3A-202ENST00000487215 GOLGA2P5Q9HBQ8 144 aa21.41■■□□□ 1.02
SMPDL3A-202ENST00000487215 GDE1Q9NZC3 331 aa21.41■■□□□ 1.02
SMPDL3A-202ENST00000487215 JAK2O60674 1132 aa21.4■■□□□ 1.02
SMPDL3A-202ENST00000487215 BRCC3P46736 316 aa21.4■■□□□ 1.02
SMPDL3A-202ENST00000487215 TRIM29Q14134 588 aa21.4■■□□□ 1.02
SMPDL3A-202ENST00000487215 PPP2R5AQ15172 486 aa21.4■■□□□ 1.02
SMPDL3A-202ENST00000487215 NT5DC1Q5TFE4 455 aa21.4■■□□□ 1.02
SMPDL3A-202ENST00000487215 ANKS3Q6ZW76 656 aa21.4■■□□□ 1.02
SMPDL3A-202ENST00000487215 ATRIPQ8WXE1 791 aa21.4■■□□□ 1.02
SMPDL3A-202ENST00000487215 UROC1Q96N76 676 aa21.4■■□□□ 1.02
SMPDL3A-202ENST00000487215 AVENQ9NQS1 362 aaPredicted RBP21.4■■□□□ 1.02
SMPDL3A-202ENST00000487215 TRAPPC3O43617 180 aa21.39■■□□□ 1.01
SMPDL3A-202ENST00000487215 CEBPBP17676 345 aa21.39■■□□□ 1.01
SMPDL3A-202ENST00000487215 RPA1P27694 616 aa21.39■■□□□ 1.01
SMPDL3A-202ENST00000487215 ROR1Q01973 937 aa21.39■■□□□ 1.01
SMPDL3A-202ENST00000487215 ATF7IP2Q5U623 682 aa21.39■■□□□ 1.01
SMPDL3A-202ENST00000487215 TANGO2Q6ICL3 276 aa21.39■■□□□ 1.01
SMPDL3A-202ENST00000487215 ERMNQ8TAM6 284 aa21.39■■□□□ 1.01
SMPDL3A-202ENST00000487215 NELL1Q92832 810 aa21.39■■□□□ 1.01
SMPDL3A-202ENST00000487215 NELL2Q99435 816 aa21.39■■□□□ 1.01
SMPDL3A-202ENST00000487215 POLD4Q9HCU8 107 aa21.39■■□□□ 1.01
SMPDL3A-202ENST00000487215 HEBP1Q9NRV9 189 aa21.39■■□□□ 1.01
SMPDL3A-202ENST00000487215 ZSCAN32Q9NX65 697 aa21.39■■□□□ 1.01
SMPDL3A-202ENST00000487215 GPR179Q6PRD1 2367 aa21.39■■□□□ 1.01
SMPDL3A-202ENST00000487215 ARHGEF37A1IGU5 675 aa21.38■■□□□ 1.01
SMPDL3A-202ENST00000487215 SHISA7A6NL88 538 aa21.38■■□□□ 1.01
SMPDL3A-202ENST00000487215 NCAM2O15394 837 aa21.38■■□□□ 1.01
SMPDL3A-202ENST00000487215 LILRB5O75023 590 aa21.38■■□□□ 1.01
SMPDL3A-202ENST00000487215 RPS9P46781 194 aaKnown RBP21.38■■□□□ 1.01
SMPDL3A-202ENST00000487215 EFNA5P52803 228 aa21.38■■□□□ 1.01
SMPDL3A-202ENST00000487215 ANAPC15P60006 121 aa21.38■■□□□ 1.01
SMPDL3A-202ENST00000487215 SOX4Q06945 474 aaPredicted RBP21.38■■□□□ 1.01
SMPDL3A-202ENST00000487215 FZD5Q13467 585 aa21.38■■□□□ 1.01
SMPDL3A-202ENST00000487215 SLC8B1Q6J4K2 584 aa21.38■■□□□ 1.01
SMPDL3A-202ENST00000487215 TSSK4Q6SA08 328 aa21.38■■□□□ 1.01
SMPDL3A-202ENST00000487215 ZNF852Q6ZMS4 543 aa21.38■■□□□ 1.01
SMPDL3A-202ENST00000487215 ELSPBP1Q96BH3 223 aa21.38■■□□□ 1.01
SMPDL3A-202ENST00000487215 EPC1Q9H2F5 836 aa21.38■■□□□ 1.01
SMPDL3A-202ENST00000487215 PRMT8Q9NR22 394 aaPredicted RBP21.38■■□□□ 1.01
SMPDL3A-202ENST00000487215 SMG5Q9UPR3 1016 aaKnown RBP21.38■■□□□ 1.01
SMPDL3A-202ENST00000487215 CEP250Q9BV73 2442 aa21.37■■□□□ 1.01
SMPDL3A-202ENST00000487215 SMIM28A0A1B0GU29 152 aa21.37■■□□□ 1.01
SMPDL3A-202ENST00000487215 LRG1P02750 347 aa21.37■■□□□ 1.01
SMPDL3A-202ENST00000487215 PTPN2P17706 415 aa21.37■■□□□ 1.01
SMPDL3A-202ENST00000487215 FCARP24071 287 aa21.37■■□□□ 1.01
SMPDL3A-202ENST00000487215 PRSS36Q5K4E3 855 aa21.37■■□□□ 1.01
SMPDL3A-202ENST00000487215 CEP120Q8N960 986 aa21.37■■□□□ 1.01
SMPDL3A-202ENST00000487215 ZNF461Q8TAF7 563 aa21.37■■□□□ 1.01
SMPDL3A-202ENST00000487215 DNASE1L2Q92874 299 aa21.37■■□□□ 1.01
SMPDL3A-202ENST00000487215 IFT74Q96LB3 600 aa21.37■■□□□ 1.01
SMPDL3A-202ENST00000487215 DAXXQ9UER7 740 aaPredicted RBP21.37■■□□□ 1.01
SMPDL3A-202ENST00000487215 WDR27A2RRH5 827 aa21.36■■□□□ 1.01
SMPDL3A-202ENST00000487215 ABLIM3O94929 683 aa21.36■■□□□ 1.01
SMPDL3A-202ENST00000487215 OR52Z1P0C646 297 aa21.36■■□□□ 1.01
SMPDL3A-202ENST00000487215 ADCY1Q08828 1119 aa21.36■■□□□ 1.01
SMPDL3A-202ENST00000487215 APBB1IPQ7Z5R6 666 aaPredicted RBP21.36■■□□□ 1.01
SMPDL3A-202ENST00000487215 GPR161Q8N6U8 529 aaKnown RBP21.36■■□□□ 1.01
SMPDL3A-202ENST00000487215 TNFSF13BQ9Y275 285 aa21.36■■□□□ 1.01
SMPDL3A-202ENST00000487215 MRPS17Q9Y2R5 130 aaKnown RBP21.36■■□□□ 1.01
SMPDL3A-202ENST00000487215 PRRG1O14668 218 aa21.35■■□□□ 1.01
SMPDL3A-202ENST00000487215 ELF1P32519 619 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms