RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 CD300LGQ6UXG3 332 aa14.34□□□□□ -0.11
SF1-216ENST00000486867 ADGRD2Q7Z7M1 963 aa14.34□□□□□ -0.11
SF1-216ENST00000486867 C12orf56Q8IXR9 622 aa14.34□□□□□ -0.11
SF1-216ENST00000486867 VPS52Q8N1B4 723 aa14.34□□□□□ -0.11
SF1-216ENST00000486867 KIAA0895Q8NCT3 520 aa14.34□□□□□ -0.11
SF1-216ENST00000486867 PPP2R3CQ969Q6 453 aa14.34□□□□□ -0.11
SF1-216ENST00000486867 PABPC5Q96DU9 382 aaKnown RBP14.34□□□□□ -0.11
SF1-216ENST00000486867 FBXL18Q96ME1 805 aa14.34□□□□□ -0.11
SF1-216ENST00000486867 IPO9Q96P70 1041 aaKnown RBP14.34□□□□□ -0.11
SF1-216ENST00000486867 TCF25Q9BQ70 676 aa14.34□□□□□ -0.11
SF1-216ENST00000486867 ASB7Q9H672 318 aa14.34□□□□□ -0.11
SF1-216ENST00000486867 CGNQ9P2M7 1197 aaKnown RBP14.34□□□□□ -0.11
SF1-216ENST00000486867 PRG3Q9Y2Y8 225 aaPredicted RBP14.34□□□□□ -0.11
SF1-216ENST00000486867 DERAQ9Y315 318 aa14.34□□□□□ -0.11
SF1-216ENST00000486867 PCDHGC5Q9Y5F6 944 aa14.34□□□□□ -0.11
SF1-216ENST00000486867 A0A0C4DFX4 3053 aa14.33□□□□□ -0.11
SF1-216ENST00000486867 C2orf16Q68DN1 1984 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 GOLGA6L4A6NEF3 574 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 C2orf71A6NGG8 1288 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 KIF4AO95239 1232 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 CYP3A5P20815 502 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 LRPAP1P30533 357 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 RPL9P32969 192 aaKnown RBP14.33□□□□□ -0.12
SF1-216ENST00000486867 LTBRP36941 435 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 STK4Q13043 487 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 ADAM15Q13444 863 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 GLRA4Q5JXX5 417 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 KIAA0319Q5VV43 1072 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 TMEM184AQ6ZMB5 413 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 MICALL1Q8N3F8 863 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 EFHBQ8N7U6 833 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 POMGNT1Q8WZA1 660 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 DDX27Q96GQ7 796 aaKnown RBP14.33□□□□□ -0.12
SF1-216ENST00000486867 GPR62Q9BZJ7 368 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 RPF1Q9H9Y2 349 aaKnown RBP14.33□□□□□ -0.12
SF1-216ENST00000486867 EXOC1Q9NV70 894 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 THEGQ9P2T0 379 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 CACNG4Q9UBN1 327 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 C2CD2Q9Y426 696 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 DENND4AQ7Z401 1863 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 XIRP2A4UGR9 3374 aa14.33□□□□□ -0.12
SF1-216ENST00000486867 TTC28Q96AY4 2481 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 CASTOR2A6NHX0 329 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 HIDE1A8MVS5 230 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 LACTBL1A8MY62 500 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 GADD45BO75293 160 aaPredicted RBP14.32□□□□□ -0.12
SF1-216ENST00000486867 LDHAP00338 332 aaKnown RBP14.32□□□□□ -0.12
SF1-216ENST00000486867 C1RP00736 705 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 MATR3P43243 847 aaKnown RBP eCLIP14.32□□□□□ -0.12
SF1-216ENST00000486867 ACOT2P49753 483 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 DSG1Q02413 1049 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 PPP2R3AQ06190 1150 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 PTPN14Q15678 1187 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 KNOP1Q1ED39 458 aaKnown RBP14.32□□□□□ -0.12
SF1-216ENST00000486867 FUT10Q6P4F1 479 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 DCLRE1AQ6PJP8 1040 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 TMC7Q7Z402 723 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 BRSK2Q8IWQ3 736 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 SYCP3Q8IZU3 236 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 ATXN2LQ8WWM7 1075 aaKnown RBP14.32□□□□□ -0.12
SF1-216ENST00000486867 HLA-CQ95604 372 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 C18orf25Q96B23 403 aaPredicted RBP14.32□□□□□ -0.12
SF1-216ENST00000486867 CCDC34Q96HJ3 373 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 CBWD1Q9BRT8 395 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 UBE2ZQ9H832 354 aaPredicted RBP14.32□□□□□ -0.12
SF1-216ENST00000486867 RXFP1Q9HBX9 757 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 SLC39A2Q9NP94 309 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 PRDM6Q9NQX0 595 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 ENTPD7Q9NQZ7 604 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 AGPAT3Q9NRZ7 376 aa14.32□□□□□ -0.12
SF1-216ENST00000486867 UBQLN1Q9UMX0 589 aaKnown RBP14.32□□□□□ -0.12
SF1-216ENST00000486867 SF3B1O75533 1304 aaKnown RBP eCLIP14.32□□□□□ -0.121e-8■■■■□ 24.8
SF1-216ENST00000486867 EXTL3O43909 919 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 IL18RAPO95256 599 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 GLP2RO95838 553 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 GTF2F1P35269 517 aaKnown RBP eCLIP14.31□□□□□ -0.12
SF1-216ENST00000486867 CLCNKBP51801 687 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 UBE2HP62256 183 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 ELAVL2Q12926 359 aaKnown RBP14.31□□□□□ -0.12
SF1-216ENST00000486867 BMS1Q14692 1282 aaKnown RBP14.31□□□□□ -0.12
SF1-216ENST00000486867 COBLL1Q53SF7 1204 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 SPATA1Q5VX52 437 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 PLPP4Q5VZY2 271 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 TAS1R1Q7RTX1 841 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 NT5DC4Q86YG4 428 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 SLC9A9Q8IVB4 645 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.31□□□□□ -0.12
SF1-216ENST00000486867 C3orf58Q8NDZ4 430 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 ZSWIM2Q8NEG5 633 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 PPM1EQ8WY54 764 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 GSDMAQ96QA5 445 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 KCTD10Q9H3F6 313 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 TLE6Q9H808 572 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 GOLGA2P5Q9HBQ8 144 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 SSX2IPQ9Y2D8 614 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 DOCK6Q96HP0 2047 aa14.31□□□□□ -0.12
SF1-216ENST00000486867 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.3□□□□□ -0.12
SF1-216ENST00000486867 ANO9A1A5B4 782 aa14.3□□□□□ -0.12
SF1-216ENST00000486867 XPOTO43592 962 aaKnown RBP14.3□□□□□ -0.12
SF1-216ENST00000486867 CXCL14O95715 111 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms