RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 DCLK2Q8N568 766 aa22.08■■□□□ 1.13
PHF1-208ENST00000486845 ERMNQ8TAM6 284 aa22.08■■□□□ 1.13
PHF1-208ENST00000486845 UROC1Q96N76 676 aa22.08■■□□□ 1.13
PHF1-208ENST00000486845 MRPS23Q9Y3D9 190 aaKnown RBP22.08■■□□□ 1.13
PHF1-208ENST00000486845 MTF2Q9Y483 593 aaPredicted RBP22.08■■□□□ 1.13
PHF1-208ENST00000486845 PCDHGA2Q9Y5H1 932 aa22.08■■□□□ 1.13
PHF1-208ENST00000486845 BACE2Q9Y5Z0 518 aa22.08■■□□□ 1.13
PHF1-208ENST00000486845 CDY1Q9Y6F8 540 aa22.08■■□□□ 1.13
PHF1-208ENST00000486845 GPR179Q6PRD1 2367 aa22.07■■□□□ 1.12
PHF1-208ENST00000486845 NOTCH4Q99466 2003 aa22.07■■□□□ 1.12
PHF1-208ENST00000486845 COL4A3Q01955 1670 aa22.07■■□□□ 1.12
PHF1-208ENST00000486845 MED19A0JLT2 244 aaPredicted RBP22.07■■□□□ 1.12
PHF1-208ENST00000486845 ECI2O75521 394 aa22.07■■□□□ 1.12
PHF1-208ENST00000486845 MCM7P33993 719 aa22.07■■□□□ 1.12
PHF1-208ENST00000486845 EFNA5P52803 228 aa22.07■■□□□ 1.12
PHF1-208ENST00000486845 ZBTB41Q5SVQ8 909 aa22.07■■□□□ 1.12
PHF1-208ENST00000486845 ANKS3Q6ZW76 656 aa22.07■■□□□ 1.12
PHF1-208ENST00000486845 NSUN7Q8NE18 718 aaKnown RBP22.07■■□□□ 1.12
PHF1-208ENST00000486845 ING5Q8WYH8 240 aa22.07■■□□□ 1.12
PHF1-208ENST00000486845 PPP1R10Q96QC0 940 aaKnown RBP22.07■■□□□ 1.12
PHF1-208ENST00000486845 GDE1Q9NZC3 331 aa22.07■■□□□ 1.12
PHF1-208ENST00000486845 USP20Q9Y2K6 914 aa22.07■■□□□ 1.12
PHF1-208ENST00000486845 EDN1P05305 212 aa22.06■■□□□ 1.12
PHF1-208ENST00000486845 RPA1P27694 616 aa22.06■■□□□ 1.12
PHF1-208ENST00000486845 FOSBP53539 338 aa22.06■■□□□ 1.12
PHF1-208ENST00000486845 CSTF1Q05048 431 aaKnown RBP22.06■■□□□ 1.12
PHF1-208ENST00000486845 ME3Q16798 604 aa22.06■■□□□ 1.12
PHF1-208ENST00000486845 GLRA4Q5JXX5 417 aa22.06■■□□□ 1.12
PHF1-208ENST00000486845 ATRIPQ8WXE1 791 aa22.06■■□□□ 1.12
PHF1-208ENST00000486845 DDX27Q96GQ7 796 aaKnown RBP22.06■■□□□ 1.12
PHF1-208ENST00000486845 IFT74Q96LB3 600 aa22.06■■□□□ 1.12
PHF1-208ENST00000486845 NELL2Q99435 816 aa22.06■■□□□ 1.12
PHF1-208ENST00000486845 DLL3Q9NYJ7 618 aa22.06■■□□□ 1.12
PHF1-208ENST00000486845 NCDNQ9UBB6 729 aa22.06■■□□□ 1.12
PHF1-208ENST00000486845 NCAM2O15394 837 aa22.05■■□□□ 1.12
PHF1-208ENST00000486845 LARGE1O95461 756 aa22.05■■□□□ 1.12
PHF1-208ENST00000486845 TKTP29401 623 aaKnown RBP22.05■■□□□ 1.12
PHF1-208ENST00000486845 CLCNKBP51801 687 aa22.05■■□□□ 1.12
PHF1-208ENST00000486845 ATF7IP2Q5U623 682 aa22.05■■□□□ 1.12
PHF1-208ENST00000486845 TPRG1Q6ZUI0 275 aa22.05■■□□□ 1.12
PHF1-208ENST00000486845 CLDN23Q96B33 292 aa22.05■■□□□ 1.12
PHF1-208ENST00000486845 AVENQ9NQS1 362 aaPredicted RBP22.05■■□□□ 1.12
PHF1-208ENST00000486845 MRPS17Q9Y2R5 130 aaKnown RBP22.05■■□□□ 1.12
PHF1-208ENST00000486845 RHOP08100 348 aa22.04■■□□□ 1.12
PHF1-208ENST00000486845 CD72P21854 359 aa22.04■■□□□ 1.12
PHF1-208ENST00000486845 MUTP22033 750 aa22.04■■□□□ 1.12
PHF1-208ENST00000486845 UPP1Q16831 310 aa22.04■■□□□ 1.12
PHF1-208ENST00000486845 VARS2Q5ST30 1063 aaKnown RBP22.04■■□□□ 1.12
PHF1-208ENST00000486845 GPR161Q8N6U8 529 aaKnown RBP22.04■■□□□ 1.12
PHF1-208ENST00000486845 MCRS1Q96EZ8 462 aa22.04■■□□□ 1.12
PHF1-208ENST00000486845 KIFC3Q9BVG8 833 aa22.04■■□□□ 1.12
PHF1-208ENST00000486845 ZSCAN32Q9NX65 697 aa22.04■■□□□ 1.12
PHF1-208ENST00000486845 NCOR2Q9Y618 2525 aa22.04■■□□□ 1.12
PHF1-208ENST00000486845 ARHGEF37A1IGU5 675 aa22.03■■□□□ 1.12
PHF1-208ENST00000486845 JAK2O60674 1132 aa22.03■■□□□ 1.12
PHF1-208ENST00000486845 LRG1P02750 347 aa22.03■■□□□ 1.12
PHF1-208ENST00000486845 OR52Z1P0C646 297 aa22.03■■□□□ 1.12
PHF1-208ENST00000486845 PTPN2P17706 415 aa22.03■■□□□ 1.12
PHF1-208ENST00000486845 TARSP26639 723 aaKnown RBP22.03■■□□□ 1.12
PHF1-208ENST00000486845 RPS9P46781 194 aaKnown RBP22.03■■□□□ 1.12
PHF1-208ENST00000486845 ORC2Q13416 577 aaPredicted RBP22.03■■□□□ 1.12
PHF1-208ENST00000486845 SAFBQ15424 915 aaKnown RBP eCLIP22.03■■□□□ 1.12
PHF1-208ENST00000486845 SLC5A9Q2M3M2 681 aa22.03■■□□□ 1.12
PHF1-208ENST00000486845 NT5DC1Q5TFE4 455 aa22.03■■□□□ 1.12
PHF1-208ENST00000486845 HAUS3Q68CZ6 603 aa22.03■■□□□ 1.12
PHF1-208ENST00000486845 CD300LGQ6UXG3 332 aa22.03■■□□□ 1.12
PHF1-208ENST00000486845 ZNF852Q6ZMS4 543 aa22.03■■□□□ 1.12
PHF1-208ENST00000486845 ZBTB44Q8NCP5 570 aa22.03■■□□□ 1.12
PHF1-208ENST00000486845 KIFAP3Q92845 792 aa22.03■■□□□ 1.12
PHF1-208ENST00000486845 SECISBP2LQ93073 1101 aaKnown RBP22.03■■□□□ 1.12
PHF1-208ENST00000486845 TOPORSQ9NS56 1045 aaPredicted RBP22.03■■□□□ 1.12
PHF1-208ENST00000486845 TRIP11Q15643 1979 aa22.03■■□□□ 1.12
PHF1-208ENST00000486845 I3L4J1 428 aa22.02■■□□□ 1.12
PHF1-208ENST00000486845 PRRG1O14668 218 aa22.02■■□□□ 1.12
PHF1-208ENST00000486845 IGFBP6P24592 240 aaPredicted RBP22.02■■□□□ 1.12
PHF1-208ENST00000486845 ELF1P32519 619 aa22.02■■□□□ 1.12
PHF1-208ENST00000486845 BRCC3P46736 316 aa22.02■■□□□ 1.12
PHF1-208ENST00000486845 YARSP54577 528 aaKnown RBP22.02■■□□□ 1.12
PHF1-208ENST00000486845 ROR1Q01973 937 aa22.02■■□□□ 1.12
PHF1-208ENST00000486845 RSPO4Q2I0M5 234 aaPredicted RBP22.02■■□□□ 1.12
PHF1-208ENST00000486845 SLC8B1Q6J4K2 584 aa22.02■■□□□ 1.12
PHF1-208ENST00000486845 C3orf58Q8NDZ4 430 aa22.02■■□□□ 1.12
PHF1-208ENST00000486845 ZNF461Q8TAF7 563 aa22.02■■□□□ 1.12
PHF1-208ENST00000486845 DNASE1L2Q92874 299 aa22.02■■□□□ 1.12
PHF1-208ENST00000486845 ELSPBP1Q96BH3 223 aa22.02■■□□□ 1.12
PHF1-208ENST00000486845 GOLGA2P5Q9HBQ8 144 aa22.02■■□□□ 1.12
PHF1-208ENST00000486845 SLC38A7Q9NVC3 462 aa22.02■■□□□ 1.12
PHF1-208ENST00000486845 TNFSF13BQ9Y275 285 aa22.02■■□□□ 1.12
PHF1-208ENST00000486845 SMIM28A0A1B0GU29 152 aa22.01■■□□□ 1.11
PHF1-208ENST00000486845 K7ERI5 159 aa22.01■■□□□ 1.11
PHF1-208ENST00000486845 CEBPBP17676 345 aa22.01■■□□□ 1.11
PHF1-208ENST00000486845 SDHBP21912 280 aa22.01■■□□□ 1.11
PHF1-208ENST00000486845 GRM5P41594 1212 aa22.01■■□□□ 1.11
PHF1-208ENST00000486845 NELL1Q92832 810 aa22.01■■□□□ 1.11
PHF1-208ENST00000486845 CCDC94Q9BW85 323 aaPredicted RBP22.01■■□□□ 1.11
PHF1-208ENST00000486845 PLA2G2FQ9BZM2 168 aa22.01■■□□□ 1.11
PHF1-208ENST00000486845 EPC1Q9H2F5 836 aa22.01■■□□□ 1.11
PHF1-208ENST00000486845 HEBP1Q9NRV9 189 aa22.01■■□□□ 1.11
PHF1-208ENST00000486845 SMG5Q9UPR3 1016 aaKnown RBP22.01■■□□□ 1.11
PHF1-208ENST00000486845 DNAH14Q0VDD8 3507 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms