RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 TAS1R1Q7RTX1 841 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 HSCBQ8IWL3 235 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 ZNF808Q8N4W9 903 aaPredicted RBP6.19□□□□□ -1.42
COPS3-209ENST00000486810 LILRA3Q8N6C8 439 aaPredicted RBP6.19□□□□□ -1.42
COPS3-209ENST00000486810 CNTD1Q8N815 330 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 PRPF38AQ8NAV1 312 aaKnown RBP6.19□□□□□ -1.42
COPS3-209ENST00000486810 GIMAP1Q8WWP7 306 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 DVL3Q92997 716 aaPredicted RBP6.19□□□□□ -1.42
COPS3-209ENST00000486810 CRACR2AQ9BSW2 395 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 KRTAP4-9Q9BYQ8 210 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 UNC45AQ9H3U1 944 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 IL23AQ9NPF7 189 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 A1CFQ9NQ94 594 aaKnown RBP6.19□□□□□ -1.42
COPS3-209ENST00000486810 SLC5A4Q9NY91 659 aa6.19□□□□□ -1.42
COPS3-209ENST00000486810 BARX2Q9UMQ3 279 aaPredicted RBP6.19□□□□□ -1.42
COPS3-209ENST00000486810 SPAG9O60271 1321 aaKnown RBP6.19□□□□□ -1.42
COPS3-209ENST00000486810 KDRP35968 1356 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 A0A1W2PRX2 142 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 PLSCR1O15162 318 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 STC2O76061 302 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 ALDH1A2O94788 518 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 JUNP05412 331 aaKnown RBP6.18□□□□□ -1.42
COPS3-209ENST00000486810 TPM1P09493 284 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 U2AF1L5P0DN76 240 aaPredicted RBP6.18□□□□□ -1.42
COPS3-209ENST00000486810 XBP1P17861 261 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 RPL17P18621 184 aaKnown RBP6.18□□□□□ -1.42
COPS3-209ENST00000486810 ACO1P21399 889 aaKnown RBP6.18□□□□□ -1.42
COPS3-209ENST00000486810 CHMLP26374 656 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 HOXD10P28358 340 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 MAGEA9P43362 315 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 MRPS9P82933 396 aaKnown RBP6.18□□□□□ -1.42
COPS3-209ENST00000486810 U2AF1Q01081 240 aaKnown RBP eCLIP6.18□□□□□ -1.42
COPS3-209ENST00000486810 SRSF2Q01130 221 aaKnown RBP6.18□□□□□ -1.42
COPS3-209ENST00000486810 UBE3CQ15386 1083 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 INAVAQ3KP66 663 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 TTC31Q49AM3 519 aaPredicted RBP6.18□□□□□ -1.42
COPS3-209ENST00000486810 TOR2AQ5JU69 321 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 KCNV1Q6PIU1 500 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 UBE2Q1Q7Z7E8 422 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 PALM2Q8IXS6 379 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 LMNTD2Q8IXW0 634 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 PDILTQ8N807 584 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 TCP11Q8WWU5 503 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 EDAQ92838 391 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 MIEF2Q96C03 454 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 PCDH12Q9NPG4 1184 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 CCM2LQ9NUG4 571 aaPredicted RBP6.18□□□□□ -1.42
COPS3-209ENST00000486810 RABL2BQ9UNT1 228 aa6.18□□□□□ -1.42
COPS3-209ENST00000486810 MYO1CO00159 1063 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 NRP2O60462 931 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 BBOX1O75936 387 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 PARNO95453 639 aaKnown RBP6.17□□□□□ -1.42
COPS3-209ENST00000486810 XPAP23025 273 aaPredicted RBP6.17□□□□□ -1.42
COPS3-209ENST00000486810 NUCB2P80303 420 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 CDK17Q00537 523 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 FAPQ12884 760 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 KRT72Q14CN4 511 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 MUM1Q2TAK8 710 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 HHATQ5VTY9 493 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 KRT40Q6A162 431 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 LMBR1LQ6UX01 489 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 NECAB2Q7Z6G3 386 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 MYLK4Q86YV6 388 aaPredicted RBP6.17□□□□□ -1.42
COPS3-209ENST00000486810 CMTM4Q8IZR5 234 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 MYO1HQ8N1T3 1032 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 TXLNBQ8N3L3 684 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 RAX2Q96IS3 184 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 ADOQ96SZ5 270 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 QPCTLQ9NXS2 382 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 TSC22D4Q9Y3Q8 395 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 COL4A3BPQ9Y5P4 624 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 SCINQ9Y6U3 715 aa6.17□□□□□ -1.42
COPS3-209ENST00000486810 hCG_2014768A0A024R1R8 64 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 C1QTNF3-AMACRE9PGA6 284 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 ZSCAN9O15535 394 aaPredicted RBP6.16□□□□□ -1.42
COPS3-209ENST00000486810 CTIFO43310 598 aaKnown RBP6.16□□□□□ -1.42
COPS3-209ENST00000486810 SMC2O95347 1197 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 LTA4HP09960 611 aaKnown RBP6.16□□□□□ -1.42
COPS3-209ENST00000486810 ZNF24P17028 368 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 CTSSP25774 331 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 RDXP35241 583 aaKnown RBP6.16□□□□□ -1.42
COPS3-209ENST00000486810 MTNR1BP49286 362 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 NRG3P56975 720 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 MTMR1Q13613 665 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 SPIDRQ14159 915 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 CCDC92Q53HC0 331 aaPredicted RBP6.16□□□□□ -1.42
COPS3-209ENST00000486810 SPDYAQ5MJ70 313 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 FAM111BQ6SJ93 734 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 SYNE3Q6ZMZ3 975 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 MMS22LQ6ZRQ5 1243 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 CCDC80Q76M96 950 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 SDCCAG8Q86SQ7 713 aaPredicted RBP6.16□□□□□ -1.42
COPS3-209ENST00000486810 GGNQ86UU5 652 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 ARHGEF25Q86VW2 580 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 GLB1L2Q8IW92 636 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 DRC7Q8IY82 874 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 KRT222Q8N1A0 295 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 NEK9Q8TD19 979 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 BICD1Q96G01 975 aa6.16□□□□□ -1.42
COPS3-209ENST00000486810 TCF25Q9BQ70 676 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms