RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 C9orf131Q5VYM1 1079 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 FASTKD5Q7L8L6 764 aaKnown RBP14.07□□□□□ -0.16
HMGN1-216ENST00000486741 RHOT1Q8IXI2 618 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 EXOC8Q8IYI6 725 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 C9orf72Q96LT7 481 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 RPS6KC1Q96S38 1066 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 SPATC1LQ9H0A9 340 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 SPC25Q9HBM1 224 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 IGLV3-22A0A075B6J6 115 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 NPM3O75607 178 aaKnown RBP14.07□□□□□ -0.16
HMGN1-216ENST00000486741 DIS3Q9Y2L1 958 aaKnown RBP14.07□□□□□ -0.16
HMGN1-216ENST00000486741 MCF2LO15068 1137 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 NOL4O94818 638 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 ADRB2P07550 413 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 NLRP11P59045 1033 aaKnown RBP14.07□□□□□ -0.16
HMGN1-216ENST00000486741 GPS1Q13098 491 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 TWF2Q6IBS0 349 aaKnown RBP14.07□□□□□ -0.16
HMGN1-216ENST00000486741 XRRA1Q6P2D8 792 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 MAP7D3Q8IWC1 876 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 SRRM1Q8IYB3 904 aaKnown RBP14.07□□□□□ -0.16
HMGN1-216ENST00000486741 ATP6V1G3Q96LB4 118 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 C2orf40Q9H1Z8 148 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 STK38LQ9Y2H1 464 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 GJB6O95452 261 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 CYP24A1Q07973 514 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 VGLL4Q14135 290 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 HYIQ5T013 277 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 ATF7IP2Q5U623 682 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 GPAT2Q6NUI2 795 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 ZC3H18Q86VM9 953 aaKnown RBP14.07□□□□□ -0.16
HMGN1-216ENST00000486741 C1orf131Q8NDD1 294 aaKnown RBP14.07□□□□□ -0.16
HMGN1-216ENST00000486741 PARD3BQ8TEW8 1205 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 RNF19AQ9NV58 838 aa14.07□□□□□ -0.16
HMGN1-216ENST00000486741 DBR1Q9UK59 544 aaKnown RBP14.07□□□□□ -0.16
HMGN1-216ENST00000486741 TJP3O95049 919 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 MAN1A1P33908 653 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 SEC24CP53992 1094 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 ITIH3Q06033 890 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 SMARCAD1Q9H4L7 1026 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 WRAP73Q9P2S5 460 aaPredicted RBP14.06□□□□□ -0.16
HMGN1-216ENST00000486741 SNX9Q9Y5X1 595 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 IRF6O14896 467 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 CYP2C8P10632 490 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 GBP1P32455 592 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 LMNB2Q03252 620 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 C2orf69Q8N8R5 385 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 PPM1EQ8WY54 764 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 UBIAD1Q9Y5Z9 338 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 CCNE2O96020 404 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 CALB1P05937 261 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 ADORA2BP29275 332 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 CDR2Q01850 454 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 IRF2BP2Q7Z5L9 587 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 UBA3Q8TBC4 463 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 LENG9Q96B70 501 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 FAM49BQ9NUQ9 324 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 UVRAGQ9P2Y5 699 aa14.06□□□□□ -0.16
HMGN1-216ENST00000486741 PLIN4Q96Q06 1357 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 P4HA2O15460 535 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 KRT3P12035 628 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 PRLRP16471 622 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 MUTP22033 750 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 AMPD2Q01433 879 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 MXD4Q14582 209 aaPredicted RBP14.05□□□□□ -0.16
HMGN1-216ENST00000486741 GLRA4Q5JXX5 417 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 CEP128Q6ZU80 1094 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 ANO5Q75V66 913 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 NOP9Q86U38 636 aaKnown RBP14.05□□□□□ -0.16
HMGN1-216ENST00000486741 BBOF1Q8ND07 529 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 ZSWIM2Q8NEG5 633 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 COPS5Q92905 334 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 WNK4Q96J92 1243 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 TSNARE1Q96NA8 513 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 PARVAQ9NVD7 372 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 CYP39A1Q9NYL5 469 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 BAIAP2L1Q9UHR4 511 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 RAB21Q9UL25 225 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 GTPBP10A4D1E9 387 aaKnown RBP14.05□□□□□ -0.16
HMGN1-216ENST00000486741 VTNP04004 478 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 PDGFRBP09619 1106 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 SAT1P21673 171 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 ALDH3A1P30838 453 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 ZNF131P52739 623 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 TRADDQ15628 312 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 GJC2Q5T442 439 aaPredicted RBP14.05□□□□□ -0.16
HMGN1-216ENST00000486741 ELAC2Q9BQ52 826 aaKnown RBP14.05□□□□□ -0.16
HMGN1-216ENST00000486741 CICQ96RK0 1608 aaPredicted RBP14.05□□□□□ -0.16
HMGN1-216ENST00000486741 CCL15-CCL14A0A0B4J2E2 113 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 RALAP11233 206 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 ANXA13P27216 316 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 MYL6P60660 151 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 CUL2Q13617 745 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 CCDC6Q16204 474 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 CCL15Q16663 113 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 ZCWPW2Q504Y3 356 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 MAP1SQ66K74 1059 aaPredicted RBP14.05□□□□□ -0.16
HMGN1-216ENST00000486741 HGSNATQ68CP4 663 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 RDM1Q8NG50 284 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 ERP44Q9BS26 406 aa14.05□□□□□ -0.16
HMGN1-216ENST00000486741 TRIM7Q9C029 511 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms