RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 TCHPQ9BT92 498 aa21.85■■□□□ 1.09
HPS3-206ENST00000486530 CARD9Q9H257 536 aa21.85■■□□□ 1.09
HPS3-206ENST00000486530 PCDHB2Q9Y5E7 798 aa21.85■■□□□ 1.09
HPS3-206ENST00000486530 TTLL13PA6NNM8 815 aa21.84■■□□□ 1.09
HPS3-206ENST00000486530 OGTO15294 1046 aa21.84■■□□□ 1.09
HPS3-206ENST00000486530 ASAP2O43150 1006 aa21.84■■□□□ 1.09
HPS3-206ENST00000486530 GH1P01241 217 aa21.84■■□□□ 1.09
HPS3-206ENST00000486530 CYP1A2P05177 515 aa21.84■■□□□ 1.09
HPS3-206ENST00000486530 TBXAS1P24557 533 aaPredicted RBP21.84■■□□□ 1.09
HPS3-206ENST00000486530 ZNF157P51786 506 aaPredicted RBP21.84■■□□□ 1.09
HPS3-206ENST00000486530 CUL2Q13617 745 aa21.84■■□□□ 1.09
HPS3-206ENST00000486530 FAM110CQ1W6H9 321 aa21.84■■□□□ 1.09
HPS3-206ENST00000486530 GPR142Q7Z601 462 aa21.84■■□□□ 1.09
HPS3-206ENST00000486530 WDR49Q8IV35 697 aa21.84■■□□□ 1.09
HPS3-206ENST00000486530 RBM47A0AV96 593 aaKnown RBP21.83■■□□□ 1.09
HPS3-206ENST00000486530 MIF4GDA9UHW6 222 aaKnown RBP21.83■■□□□ 1.09
HPS3-206ENST00000486530 HEXIM1O94992 359 aaKnown RBP21.83■■□□□ 1.09
HPS3-206ENST00000486530 EPHB4P54760 987 aa21.83■■□□□ 1.09
HPS3-206ENST00000486530 SURF1Q15526 300 aa21.83■■□□□ 1.09
HPS3-206ENST00000486530 CLEC16AQ2KHT3 1053 aa21.83■■□□□ 1.09
HPS3-206ENST00000486530 ZNF484Q5JVG2 852 aa21.83■■□□□ 1.09
HPS3-206ENST00000486530 ACAD10Q6JQN1 1059 aa21.83■■□□□ 1.09
HPS3-206ENST00000486530 EFCAB12Q6NXP0 572 aa21.83■■□□□ 1.09
HPS3-206ENST00000486530 ZBTB33Q86T24 672 aa21.83■■□□□ 1.09
HPS3-206ENST00000486530 TRAPPC12Q8WVT3 735 aa21.83■■□□□ 1.09
HPS3-206ENST00000486530 ZNF653Q96CK0 615 aa21.83■■□□□ 1.09
HPS3-206ENST00000486530 GDF3Q9NR23 364 aa21.83■■□□□ 1.09
HPS3-206ENST00000486530 UVRAGQ9P2Y5 699 aa21.83■■□□□ 1.09
HPS3-206ENST00000486530 ALG6Q9Y672 507 aa21.83■■□□□ 1.09
HPS3-206ENST00000486530 FAM170AA1A519 330 aa21.83■■□□□ 1.08
HPS3-206ENST00000486530 PHACTR2O75167 634 aa21.83■■□□□ 1.08
HPS3-206ENST00000486530 MRPS25P82663 173 aaKnown RBP21.83■■□□□ 1.08
HPS3-206ENST00000486530 CLUL1Q15846 466 aa21.83■■□□□ 1.08
HPS3-206ENST00000486530 SPOPLQ6IQ16 392 aa21.83■■□□□ 1.08
HPS3-206ENST00000486530 EMBQ6PCB8 327 aa21.83■■□□□ 1.08
HPS3-206ENST00000486530 OR5B17Q8NGF7 314 aa21.83■■□□□ 1.08
HPS3-206ENST00000486530 PPTC7Q8NI37 304 aa21.83■■□□□ 1.08
HPS3-206ENST00000486530 EMID1Q96A84 441 aaPredicted RBP21.83■■□□□ 1.08
HPS3-206ENST00000486530 RPS6KC1Q96S38 1066 aa21.83■■□□□ 1.08
HPS3-206ENST00000486530 FZD8Q9H461 694 aa21.83■■□□□ 1.08
HPS3-206ENST00000486530 APOBEC3GQ9HC16 384 aaKnown RBP21.83■■□□□ 1.08
HPS3-206ENST00000486530 ANK1P16157 1881 aa21.83■■□□□ 1.08
HPS3-206ENST00000486530 TRPM7Q96QT4 1865 aa21.83■■□□□ 1.08
HPS3-206ENST00000486530 ACKR2O00590 384 aa21.82■■□□□ 1.08
HPS3-206ENST00000486530 ABLIM1O14639 778 aa21.82■■□□□ 1.08
HPS3-206ENST00000486530 C22orf31O95567 290 aa21.82■■□□□ 1.08
HPS3-206ENST00000486530 LGALS2P05162 132 aa21.82■■□□□ 1.08
HPS3-206ENST00000486530 CLTAP09496 248 aa21.82■■□□□ 1.08
HPS3-206ENST00000486530 PROZP22891 400 aa21.82■■□□□ 1.08
HPS3-206ENST00000486530 NOP14P78316 857 aaKnown RBP21.82■■□□□ 1.08
HPS3-206ENST00000486530 NCOA4Q13772 614 aa21.82■■□□□ 1.08
HPS3-206ENST00000486530 GRB14Q14449 540 aa21.82■■□□□ 1.08
HPS3-206ENST00000486530 SEZ6Q53EL9 994 aa21.82■■□□□ 1.08
HPS3-206ENST00000486530 MPZL3Q6UWV2 235 aa21.82■■□□□ 1.08
HPS3-206ENST00000486530 TSHZ1Q6ZSZ6 1077 aa21.82■■□□□ 1.08
HPS3-206ENST00000486530 SAPCD2Q86UD0 394 aa21.82■■□□□ 1.08
HPS3-206ENST00000486530 ZNF564Q8TBZ8 553 aaPredicted RBP21.82■■□□□ 1.08
HPS3-206ENST00000486530 NLRP4Q96MN2 994 aa21.82■■□□□ 1.08
HPS3-206ENST00000486530 IMPG2Q9BZV3 1241 aa21.82■■□□□ 1.08
HPS3-206ENST00000486530 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.82■■□□□ 1.08
HPS3-206ENST00000486530 HPCAL4Q9UM19 191 aa21.82■■□□□ 1.08
HPS3-206ENST00000486530 H3BQF6 201 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 IGF2BP3O00425 579 aaKnown RBP eCLIP21.81■■□□□ 1.08
HPS3-206ENST00000486530 GLI1P08151 1106 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 ACO1P21399 889 aaKnown RBP21.81■■□□□ 1.08
HPS3-206ENST00000486530 TNFSF9P41273 254 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 CLCN3P51790 818 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 FAM193AP78312 1265 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 KLHL7Q8IXQ5 586 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 UBL4BQ8N7F7 174 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 NAP1L3Q99457 506 aaPredicted RBP21.81■■□□□ 1.08
HPS3-206ENST00000486530 NUP85Q9BW27 656 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 NFKBIZQ9BYH8 718 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 RNPEPQ9H4A4 650 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 CPSF3Q9UKF6 684 aaKnown RBP21.81■■□□□ 1.08
HPS3-206ENST00000486530 KRIT1O00522 736 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 ATMINO43313 823 aaPredicted RBP21.81■■□□□ 1.08
HPS3-206ENST00000486530 RAD51CO43502 376 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 PTENP60484 403 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 GUCY2DQ02846 1103 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 ATF7IP2Q5U623 682 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 DCAF12L1Q5VU92 463 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 MAMDC4Q6UXC1 1216 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 PLEKHH3Q7Z736 793 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 TRIM11Q96F44 468 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 HINFPQ9BQA5 517 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 KATNBL1Q9H079 304 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 MED4Q9NPJ6 270 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 PRDM10Q9NQV6 1147 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 ZNF236Q9UL36 1845 aa21.81■■□□□ 1.08
HPS3-206ENST00000486530 COL1A2P08123 1366 aa21.8■■□□□ 1.08
HPS3-206ENST00000486530 MANSC4A6NHS7 340 aaPredicted RBP21.8■■□□□ 1.08
HPS3-206ENST00000486530 INO80B-WBP1J3KQ70 363 aa21.8■■□□□ 1.08
HPS3-206ENST00000486530 UNGP13051 313 aaPredicted RBP21.8■■□□□ 1.08
HPS3-206ENST00000486530 MAPK4P31152 587 aa21.8■■□□□ 1.08
HPS3-206ENST00000486530 AARSP49588 968 aaKnown RBP eCLIP21.8■■□□□ 1.08
HPS3-206ENST00000486530 PAK2Q13177 524 aa21.8■■□□□ 1.08
HPS3-206ENST00000486530 TERF2Q15554 542 aa21.8■■□□□ 1.08
HPS3-206ENST00000486530 HSP90B2PQ58FF3 399 aa21.8■■□□□ 1.08
HPS3-206ENST00000486530 RGMBQ6NW40 437 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms