RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 RHOBTB3O94955 611 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 NPTXRO95502 500 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 FGBP02675 491 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 EDN1P05305 212 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 ARF4P18085 180 aaPredicted RBP6.16□□□□□ -1.42
COPS3-208ENST00000486032 FXR1P51114 621 aaKnown RBP eCLIP6.16□□□□□ -1.42
COPS3-208ENST00000486032 EFNA5P52803 228 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 OSTNP61366 133 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 RBL2Q08999 1139 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 PSMD2Q13200 908 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 PPIGQ13427 754 aaKnown RBP eCLIP6.16□□□□□ -1.42
COPS3-208ENST00000486032 FZD5Q13467 585 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 STIM1Q13586 685 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 KCNB1Q14721 858 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 SHHQ15465 462 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 ZNF568Q3ZCX4 644 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 SEZ6Q53EL9 994 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 NT5DC1Q5TFE4 455 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 ZNF658Q5TYW1 1059 aaPredicted RBP6.16□□□□□ -1.42
COPS3-208ENST00000486032 ATF7IP2Q5U623 682 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 EEF1DP3Q658K8 133 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 CDCA2Q69YH5 1023 aaPredicted RBP6.16□□□□□ -1.42
COPS3-208ENST00000486032 TWF2Q6IBS0 349 aaKnown RBP6.16□□□□□ -1.42
COPS3-208ENST00000486032 FAM117BQ6P1L5 589 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 ZNF365Q70YC5 407 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 TAS1R3Q7RTX0 852 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 SPRED2Q7Z698 418 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 TMCO2Q7Z6W1 182 aaPredicted RBP6.16□□□□□ -1.42
COPS3-208ENST00000486032 CREBRFQ8IUR6 639 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 ELOA2Q8IYF1 753 aaPredicted RBP6.16□□□□□ -1.42
COPS3-208ENST00000486032 RPUSD2Q8IZ73 545 aaKnown RBP6.16□□□□□ -1.42
COPS3-208ENST00000486032 MYOCDQ8IZQ8 938 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 KIAA0895Q8NCT3 520 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 ZBTB45Q96K62 511 aaPredicted RBP6.16□□□□□ -1.42
COPS3-208ENST00000486032 FIZ1Q96SL8 496 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 ADAM2Q99965 735 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 EIF2AQ9BY44 585 aaKnown RBP6.16□□□□□ -1.42
COPS3-208ENST00000486032 MRPL4Q9BYD3 311 aaKnown RBP6.16□□□□□ -1.42
COPS3-208ENST00000486032 TRIM6Q9C030 488 aaPredicted RBP6.16□□□□□ -1.42
COPS3-208ENST00000486032 TPSG1Q9NRR2 321 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 EXOC7Q9UPT5 735 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 CTNND2Q9UQB3 1225 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 GOLGA8IPA6NC78 632 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 TRIM49BA6NDI0 452 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 GOLGA8JA6NMD2 632 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 GRXCR1A8MXD5 290 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 ANKRD63C9JTQ0 380 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 ACKR2O00590 384 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 HNRNPDLO14979 420 aaKnown RBP6.15□□□□□ -1.42
COPS3-208ENST00000486032 KIF20AO95235 890 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 PARNO95453 639 aaKnown RBP6.15□□□□□ -1.42
COPS3-208ENST00000486032 ACTN1P12814 892 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 RFC2P35250 354 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 PRCPP42785 496 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 KCNJ6P48051 423 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 SARSP49591 514 aaKnown RBP6.15□□□□□ -1.42
COPS3-208ENST00000486032 CYP2J2P51589 502 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 NLRP12P59046 1061 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 GTF2BQ00403 316 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 POU5F1BQ06416 359 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 EHHADHQ08426 723 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 MORC3Q14149 939 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 IKBKEQ14164 716 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 AMHR2Q16671 573 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 TPD52L1Q16890 204 aaPredicted RBP6.15□□□□□ -1.42
COPS3-208ENST00000486032 PLEKHG4Q58EX7 1191 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 ARMCX5Q6P1M9 558 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 NOTUMQ6P988 496 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 CNKSR3Q6P9H4 555 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.15□□□□□ -1.428e-7■■□□□ 12.7
COPS3-208ENST00000486032 Q7L0L9 218 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 THNSL1Q8IYQ7 743 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 USP38Q8NB14 1042 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 SLC17A8Q8NDX2 589 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 ZNF507Q8TCN5 953 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 SCFD1Q8WVM8 642 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 POMGNT1Q8WZA1 660 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 LPPQ93052 612 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 HVCN1Q96D96 273 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 SAAL1Q96ER3 474 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 ACO2Q99798 780 aaKnown RBP6.15□□□□□ -1.42
COPS3-208ENST00000486032 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.15□□□□□ -1.424e-9■■■■■ 32.8
COPS3-208ENST00000486032 ADPGKQ9BRR6 497 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 NTPCRQ9BSD7 190 aaKnown RBP6.15□□□□□ -1.42
COPS3-208ENST00000486032 UBE2OQ9C0C9 1292 aaKnown RBP6.15□□□□□ -1.42
COPS3-208ENST00000486032 CCDC113Q9H0I3 377 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 NUCKS1Q9H1E3 243 aaKnown RBP6.15□□□□□ -1.42
COPS3-208ENST00000486032 TMX1Q9H3N1 280 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 FZD8Q9H461 694 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 PDZD7Q9H5P4 517 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 TMEM206Q9H813 350 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 IL23AQ9NPF7 189 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 OLFML3Q9NRN5 406 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 AGPAT5Q9NUQ2 364 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 RNF19AQ9NV58 838 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 CXXC1Q9P0U4 656 aaPredicted RBP6.15□□□□□ -1.42
COPS3-208ENST00000486032 PARP2Q9UGN5 583 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 LRFN2Q9ULH4 789 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 HES2Q9Y543 173 aa6.15□□□□□ -1.42
COPS3-208ENST00000486032 COL4A6Q14031 1691 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms