RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 GUCY2CP25092 1073 aa18.8■□□□□ 0.6
SMC4-216ENST00000485645 GJB2P29033 226 aa18.8■□□□□ 0.6
SMC4-216ENST00000485645 HOXA9P31269 272 aa18.8■□□□□ 0.6
SMC4-216ENST00000485645 OR1D2P34982 312 aa18.8■□□□□ 0.6
SMC4-216ENST00000485645 RAB33AQ14088 237 aa18.8■□□□□ 0.6
SMC4-216ENST00000485645 XKR4Q5GH76 650 aa18.8■□□□□ 0.6
SMC4-216ENST00000485645 ALKAL1Q6UXT8 129 aa18.8■□□□□ 0.6
SMC4-216ENST00000485645 KCTD17Q8N5Z5 321 aa18.8■□□□□ 0.6
SMC4-216ENST00000485645 DDX27Q96GQ7 796 aaKnown RBP18.8■□□□□ 0.6
SMC4-216ENST00000485645 RTP3Q9BQQ7 232 aa18.8■□□□□ 0.6
SMC4-216ENST00000485645 SLC38A7Q9NVC3 462 aa18.8■□□□□ 0.6
SMC4-216ENST00000485645 MTRRQ9UBK8 725 aa18.8■□□□□ 0.6
SMC4-216ENST00000485645 ZFP37Q9Y6Q3 630 aaPredicted RBP18.8■□□□□ 0.6
SMC4-216ENST00000485645 DOCK6Q96HP0 2047 aa18.79■□□□□ 0.6
SMC4-216ENST00000485645 SFI1A8K8P3 1242 aa18.79■□□□□ 0.6
SMC4-216ENST00000485645 SLC16A4O15374 487 aa18.79■□□□□ 0.6
SMC4-216ENST00000485645 XYLBO75191 536 aa18.79■□□□□ 0.6
SMC4-216ENST00000485645 MCF2P10911 925 aa18.79■□□□□ 0.6
SMC4-216ENST00000485645 SRFP11831 508 aa18.79■□□□□ 0.6
SMC4-216ENST00000485645 IGFBP6P24592 240 aaPredicted RBP18.79■□□□□ 0.6
SMC4-216ENST00000485645 SMTNP53814 917 aa18.79■□□□□ 0.6
SMC4-216ENST00000485645 UVSSAQ2YD98 709 aa18.79■□□□□ 0.6
SMC4-216ENST00000485645 HYIQ5T013 277 aa18.79■□□□□ 0.6
SMC4-216ENST00000485645 AXDND1Q5T1B0 1012 aaPredicted RBP18.79■□□□□ 0.6
SMC4-216ENST00000485645 MPZL3Q6UWV2 235 aa18.79■□□□□ 0.6
SMC4-216ENST00000485645 CD300LGQ6UXG3 332 aa18.79■□□□□ 0.6
SMC4-216ENST00000485645 ANKS3Q6ZW76 656 aa18.79■□□□□ 0.6
SMC4-216ENST00000485645 ACAP3Q96P50 834 aa18.79■□□□□ 0.6
SMC4-216ENST00000485645 NTPCRQ9BSD7 190 aaKnown RBP18.79■□□□□ 0.6
SMC4-216ENST00000485645 POLIQ9UNA4 740 aa18.79■□□□□ 0.6
SMC4-216ENST00000485645 USP34Q70CQ2 3546 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 VWA3AA6NCI4 1184 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 ANHXE9PGG2 379 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 STK25O00506 426 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 CCL16O15467 120 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 PI15O43692 258 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 PROZP22891 400 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 TKTP29401 623 aaKnown RBP18.78■□□□□ 0.6
SMC4-216ENST00000485645 BRCC3P46736 316 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 SOX4Q06945 474 aaPredicted RBP18.78■□□□□ 0.6
SMC4-216ENST00000485645 RAD51AP2Q09MP3 1159 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 STRN3Q13033 797 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 SYT2Q8N9I0 419 aaPredicted RBP18.78■□□□□ 0.6
SMC4-216ENST00000485645 C3orf58Q8NDZ4 430 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 SLC7A14Q8TBB6 771 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 SPIRE2Q8WWL2 714 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 CDK5RAP3Q96JB5 506 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 SNX27Q96L92 541 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 PNMA5Q96PV4 448 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 PLIN2Q99541 437 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 UPF2Q9HAU5 1272 aaKnown RBP18.78■□□□□ 0.6
SMC4-216ENST00000485645 BACE2Q9Y5Z0 518 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 CDY1Q9Y6F8 540 aa18.78■□□□□ 0.6
SMC4-216ENST00000485645 PODXLO00592 558 aa18.77■□□□□ 0.6
SMC4-216ENST00000485645 ABLIM1O14639 778 aa18.77■□□□□ 0.6
SMC4-216ENST00000485645 GFRA3O60609 400 aa18.77■□□□□ 0.6
SMC4-216ENST00000485645 HARSP12081 509 aaKnown RBP18.77■□□□□ 0.6
SMC4-216ENST00000485645 PLS3P13797 630 aa18.77■□□□□ 0.6
SMC4-216ENST00000485645 RFX1P22670 979 aa18.77■□□□□ 0.6
SMC4-216ENST00000485645 NTHL1P78549 312 aa18.77■□□□□ 0.6
SMC4-216ENST00000485645 HTR4Q13639 388 aa18.77■□□□□ 0.6
SMC4-216ENST00000485645 ARL6IP4Q66PJ3 421 aaKnown RBP18.77■□□□□ 0.6
SMC4-216ENST00000485645 RTL10Q7L3V2 364 aa18.77■□□□□ 0.6
SMC4-216ENST00000485645 ZMAT2Q96NC0 199 aaKnown RBP18.77■□□□□ 0.6
SMC4-216ENST00000485645 KCND2Q9NZV8 630 aa18.77■□□□□ 0.6
SMC4-216ENST00000485645 CNTN3Q9P232 1028 aa18.77■□□□□ 0.6
SMC4-216ENST00000485645 CDH7Q9ULB5 785 aa18.77■□□□□ 0.6
SMC4-216ENST00000485645 CA14Q9ULX7 337 aa18.77■□□□□ 0.6
SMC4-216ENST00000485645 NUMBLQ9Y6R0 609 aa18.77■□□□□ 0.6
SMC4-216ENST00000485645 MYH11P35749 1972 aa18.77■□□□□ 0.59
SMC4-216ENST00000485645 CITO14578 2027 aa18.76■□□□□ 0.59
SMC4-216ENST00000485645 KRBA1A5PL33 1030 aa18.76■□□□□ 0.59
SMC4-216ENST00000485645 I3L4J1 428 aa18.76■□□□□ 0.59
SMC4-216ENST00000485645 TOM1L1O75674 476 aa18.76■□□□□ 0.59
SMC4-216ENST00000485645 CD2BP2O95400 341 aaKnown RBP18.76■□□□□ 0.59
SMC4-216ENST00000485645 POU2F2P09086 479 aa18.76■□□□□ 0.59
SMC4-216ENST00000485645 PLA2G4BP0C869 781 aa18.76■□□□□ 0.59
SMC4-216ENST00000485645 KCNE1P15382 129 aa18.76■□□□□ 0.59
SMC4-216ENST00000485645 MCM2P49736 904 aa18.76■□□□□ 0.59
SMC4-216ENST00000485645 SLC12A3P55017 1021 aa18.76■□□□□ 0.59
SMC4-216ENST00000485645 RSPO2Q6UXX9 243 aaPredicted RBP18.76■□□□□ 0.59
SMC4-216ENST00000485645 TMEM161BQ8NDZ6 487 aa18.76■□□□□ 0.59
SMC4-216ENST00000485645 GPR152Q8TDT2 470 aa18.76■□□□□ 0.59
SMC4-216ENST00000485645 ZBTB45Q96K62 511 aaPredicted RBP18.76■□□□□ 0.59
SMC4-216ENST00000485645 ANKFY1Q9P2R3 1169 aa18.76■□□□□ 0.59
SMC4-216ENST00000485645 SMC3Q9UQE7 1217 aa18.76■□□□□ 0.59
SMC4-216ENST00000485645 ZFHX2Q9C0A1 2572 aaPredicted RBP18.76■□□□□ 0.59
SMC4-216ENST00000485645 PROB1E7EW31 1015 aa18.75■□□□□ 0.59
SMC4-216ENST00000485645 RPL9P32969 192 aaKnown RBP18.75■□□□□ 0.59
SMC4-216ENST00000485645 NOLC1Q14978 699 aaKnown RBP eCLIP18.75■□□□□ 0.59
SMC4-216ENST00000485645 CCDC105Q8IYK2 499 aa18.75■□□□□ 0.59
SMC4-216ENST00000485645 ST13P5Q8NFI4 369 aaPredicted RBP18.75■□□□□ 0.59
SMC4-216ENST00000485645 FGF13Q92913 245 aa18.75■□□□□ 0.59
SMC4-216ENST00000485645 LARSQ9P2J5 1176 aaKnown RBP18.75■□□□□ 0.59
SMC4-216ENST00000485645 NUB1Q9Y5A7 615 aa18.75■□□□□ 0.59
SMC4-216ENST00000485645 H0YCG3 227 aa18.74■□□□□ 0.59
SMC4-216ENST00000485645 SYN3O14994 580 aa18.74■□□□□ 0.59
SMC4-216ENST00000485645 MAPTP10636 758 aaKnown RBP18.74■□□□□ 0.59
SMC4-216ENST00000485645 NBL1P41271 181 aa18.74■□□□□ 0.59
SMC4-216ENST00000485645 TMEM119Q4V9L6 283 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms