RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 SIP14410 1827 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 SSU72P8A0A1W2PR75 194 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 KBTBD13C9JR72 458 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 ABLIM1O14639 778 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 ZC3H11AO75152 810 aaKnown RBP eCLIP10.29□□□□□ -0.76
CTSA-208ENST00000485627 TNNC2P02585 160 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 TUBB4AP04350 444 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 IQCF3P0C7M6 154 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 TMEM191BP0C7N4 346 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 STAG3L1P0CL83 205 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 CCL5P13501 91 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 FERP16591 822 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 FGFR4P22455 802 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 EIF4A3P38919 411 aaKnown RBP10.29□□□□□ -0.76
CTSA-208ENST00000485627 TNFSF9P41273 254 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 OSTNP61366 133 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 CLDN10P78369 228 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 POU5F1Q01860 360 aaKnown RBP10.29□□□□□ -0.76
CTSA-208ENST00000485627 PTPN11Q06124 597 aaPredicted RBP10.29□□□□□ -0.76
CTSA-208ENST00000485627 TRPC3Q13507 836 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 ITGA7Q13683 1181 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 HIC1Q14526 733 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 DRAP1Q14919 205 aaPredicted RBP10.29□□□□□ -0.76
CTSA-208ENST00000485627 ENOX2Q16206 610 aaKnown RBP10.29□□□□□ -0.76
CTSA-208ENST00000485627 ARHGAP44Q17R89 818 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 DUOXA2Q1HG44 320 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 ZBTB41Q5SVQ8 909 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 LMBRD2Q68DH5 695 aaPredicted RBP10.29□□□□□ -0.76
CTSA-208ENST00000485627 GDF6Q6KF10 455 aaPredicted RBP10.29□□□□□ -0.76
CTSA-208ENST00000485627 SLC27A1Q6PCB7 646 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 GJB7Q6PEY0 223 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.29□□□□□ -0.76
CTSA-208ENST00000485627 KIAA1328Q86T90 577 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 SESTD1Q86VW0 696 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 PPM1KQ8N3J5 372 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 KIF12Q96FN5 646 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 C16orf45Q96MC5 204 aaPredicted RBP10.29□□□□□ -0.76
CTSA-208ENST00000485627 DESI2Q9BSY9 194 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 CCDC94Q9BW85 323 aaPredicted RBP10.29□□□□□ -0.76
CTSA-208ENST00000485627 CELF4Q9BZC1 486 aaKnown RBP10.29□□□□□ -0.76
CTSA-208ENST00000485627 TRIM6Q9C030 488 aaPredicted RBP10.29□□□□□ -0.76
CTSA-208ENST00000485627 LUC7LQ9NQ29 371 aaKnown RBP10.29□□□□□ -0.76
CTSA-208ENST00000485627 C1orf112Q9NSG2 853 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 COQ4Q9Y3A0 265 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 TRPV2Q9Y5S1 764 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 ADGRG1Q9Y653 693 aa10.29□□□□□ -0.76
CTSA-208ENST00000485627 A0A1B0GUA9 196 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 USP27XA6NNY8 438 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 EIF3CLB5ME19 914 aaKnown RBP10.28□□□□□ -0.76
CTSA-208ENST00000485627 NPTXRO95502 500 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 HLA-DRAP01903 254 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 C4BPAP04003 597 aaKnown RBP10.28□□□□□ -0.76
CTSA-208ENST00000485627 TNNT1P13805 278 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 SOX5P35711 763 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 ACLYP53396 1101 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 YARSP54577 528 aaKnown RBP10.28□□□□□ -0.76
CTSA-208ENST00000485627 MRPS6P82932 125 aaKnown RBP10.28□□□□□ -0.76
CTSA-208ENST00000485627 TFAMQ00059 246 aaKnown RBP10.28□□□□□ -0.76
CTSA-208ENST00000485627 SNX17Q15036 470 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 PTGISQ16647 500 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 ZACNQ401N2 412 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 ARHGAP29Q52LW3 1261 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 CCSAPQ6IQ19 270 aaPredicted RBP10.28□□□□□ -0.76
CTSA-208ENST00000485627 PHLDB3Q6NSJ2 640 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 DPY19L2P1Q6NXN4 242 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 ENOSF1Q7L5Y1 443 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 ACRBPQ8NEB7 543 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 FBXO22Q8NEZ5 403 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 LMO3Q8TAP4 145 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 TAS1R2Q8TE23 839 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 ACAP3Q96P50 834 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 EIF3CQ99613 913 aaKnown RBP10.28□□□□□ -0.76
CTSA-208ENST00000485627 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.28□□□□□ -0.76
CTSA-208ENST00000485627 COL25A1Q9BXS0 654 aaPredicted RBP10.28□□□□□ -0.76
CTSA-208ENST00000485627 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.28□□□□□ -0.76
CTSA-208ENST00000485627 CDHR5Q9HBB8 845 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.28□□□□□ -0.76
CTSA-208ENST00000485627 ARHGAP20Q9P2F6 1191 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 PIN4Q9Y237 131 aaKnown RBP10.28□□□□□ -0.76
CTSA-208ENST00000485627 CDY2AQ9Y6F7 541 aa10.28□□□□□ -0.76
CTSA-208ENST00000485627 F8VZ95 297 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 FAM189A1O60320 539 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 B4GALT4O60513 344 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 GFPT2O94808 682 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 CXCL8P10145 99 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 ANXA13P27216 316 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 USP8P40818 1118 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 GRM5P41594 1212 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 GJA8P48165 433 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 KIF11P52732 1056 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 JAM2P57087 298 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 PTK7Q13308 1070 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 NCOA4Q13772 614 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 TDRD10Q5VZ19 366 aaKnown RBP10.27□□□□□ -0.77
CTSA-208ENST00000485627 SERINC5Q86VE9 423 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 GPIHBP1Q8IV16 184 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 ARHGEF19Q8IW93 802 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 CD302Q8IX05 232 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 CEP120Q8N960 986 aa10.27□□□□□ -0.77
CTSA-208ENST00000485627 ZNF516Q92618 1163 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms