RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 LAMTOR4Q0VGL1 99 aa13.52□□□□□ -0.25
SSR4-210ENST00000485612 PSMD5Q16401 504 aa13.52□□□□□ -0.25
SSR4-210ENST00000485612 NCAPH2Q6IBW4 605 aa13.52□□□□□ -0.25
SSR4-210ENST00000485612 GALNT17Q6IS24 598 aa13.52□□□□□ -0.25
SSR4-210ENST00000485612 PIK3AP1Q6ZUJ8 805 aa13.52□□□□□ -0.25
SSR4-210ENST00000485612 NEK8Q86SG6 692 aa13.52□□□□□ -0.25
SSR4-210ENST00000485612 CEP57Q86XR8 500 aa13.52□□□□□ -0.25
SSR4-210ENST00000485612 LNX1Q8TBB1 728 aaPredicted RBP13.52□□□□□ -0.25
SSR4-210ENST00000485612 ZCCHC14Q8WYQ9 949 aaKnown RBP13.52□□□□□ -0.25
SSR4-210ENST00000485612 DYDC2Q96IM9 177 aa13.52□□□□□ -0.25
SSR4-210ENST00000485612 CEP170P1Q96L14 293 aa13.52□□□□□ -0.25
SSR4-210ENST00000485612 LXNQ9BS40 222 aa13.52□□□□□ -0.25
SSR4-210ENST00000485612 TTPALQ9BTX7 342 aa13.52□□□□□ -0.25
SSR4-210ENST00000485612 APOL6Q9BWW8 343 aa13.52□□□□□ -0.25
SSR4-210ENST00000485612 ZFP14Q9HCL3 533 aa13.52□□□□□ -0.25
SSR4-210ENST00000485612 ZNF334Q9HCZ1 680 aaPredicted RBP13.52□□□□□ -0.25
SSR4-210ENST00000485612 TRPV5Q9NQA5 729 aa13.52□□□□□ -0.25
SSR4-210ENST00000485612 HES2Q9Y543 173 aa13.52□□□□□ -0.25
SSR4-210ENST00000485612 PDCD11Q14690 1871 aaKnown RBP13.51□□□□□ -0.25
SSR4-210ENST00000485612 SF3B1O75533 1304 aaKnown RBP eCLIP13.51□□□□□ -0.25
SSR4-210ENST00000485612 STK36Q9NRP7 1315 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 ADAM12O43184 909 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 CCNT1O60563 726 aaKnown RBP13.51□□□□□ -0.25
SSR4-210ENST00000485612 EPN2O95208 641 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 CTDNEP1O95476 244 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 TOP3BO95985 862 aaKnown RBP13.51□□□□□ -0.25
SSR4-210ENST00000485612 P4HBP07237 508 aaKnown RBP13.51□□□□□ -0.25
SSR4-210ENST00000485612 RHOP08100 348 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 CCNE1P24864 410 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 GDI1P31150 447 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 CYP4A11Q02928 519 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 SPIRE1Q08AE8 756 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 ZNF252P-AS1Q0IIN9 211 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 PTGDRQ13258 359 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 CTTNQ14247 550 aaKnown RBP13.51□□□□□ -0.25
SSR4-210ENST00000485612 LRRC32Q14392 662 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 EMC2Q15006 297 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 SLC5A9Q2M3M2 681 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 FAM171A1Q5VUB5 890 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 PPP4R3AQ6IN85 833 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 CPLX2Q6PUV4 134 aaKnown RBP13.51□□□□□ -0.25
SSR4-210ENST00000485612 CACNA2D4Q7Z3S7 1137 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 WDR5BQ86VZ2 330 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 MAP4K3Q8IVH8 894 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 PSPC1Q8WXF1 523 aaKnown RBP13.51□□□□□ -0.25
SSR4-210ENST00000485612 SLC7A3Q8WY07 619 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 PIK3R5Q8WYR1 880 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 KIF12Q96FN5 646 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 FAM20AQ96MK3 541 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 JPH2Q9BR39 696 aaPredicted RBP13.51□□□□□ -0.25
SSR4-210ENST00000485612 EIF2AQ9BY44 585 aaKnown RBP13.51□□□□□ -0.25
SSR4-210ENST00000485612 SMOC1Q9H4F8 434 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 XPNPEP1Q9NQW7 623 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 TPCN1Q9ULQ1 816 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 ZFYVE26Q68DK2 2539 aa13.51□□□□□ -0.25
SSR4-210ENST00000485612 WNT7AO00755 349 aa13.5□□□□□ -0.25
SSR4-210ENST00000485612 EPB41L2O43491 1005 aaKnown RBP13.5□□□□□ -0.25
SSR4-210ENST00000485612 ZIC2O95409 532 aaPredicted RBP13.5□□□□□ -0.25
SSR4-210ENST00000485612 CEBPBP17676 345 aa13.5□□□□□ -0.25
SSR4-210ENST00000485612 FCARP24071 287 aa13.5□□□□□ -0.25
SSR4-210ENST00000485612 YWHABP31946 246 aaKnown RBP13.5□□□□□ -0.25
SSR4-210ENST00000485612 RAP1GAPP47736 663 aa13.5□□□□□ -0.25
SSR4-210ENST00000485612 NR5A1Q13285 461 aa13.5□□□□□ -0.25
SSR4-210ENST00000485612 RAB33AQ14088 237 aa13.5□□□□□ -0.25
SSR4-210ENST00000485612 HSP90AA2PQ14568 343 aaPredicted RBP13.5□□□□□ -0.25
SSR4-210ENST00000485612 EPHA7Q15375 998 aa13.5□□□□□ -0.25
SSR4-210ENST00000485612 XKR9Q5GH70 373 aa13.5□□□□□ -0.25
SSR4-210ENST00000485612 FAM78AQ5JUQ0 283 aa13.5□□□□□ -0.25
SSR4-210ENST00000485612 PLA2G2CQ5R387 149 aa13.5□□□□□ -0.25
SSR4-210ENST00000485612 RTL10Q7L3V2 364 aa13.5□□□□□ -0.25
SSR4-210ENST00000485612 FERMT3Q86UX7 667 aa13.5□□□□□ -0.25
SSR4-210ENST00000485612 C4orf19Q8IY42 314 aa13.5□□□□□ -0.25
SSR4-210ENST00000485612 FAM177A1Q8N128 213 aaPredicted RBP13.5□□□□□ -0.25
SSR4-210ENST00000485612 RNF149Q8NC42 400 aa13.5□□□□□ -0.25
SSR4-210ENST00000485612 GSTCDQ8NEC7 633 aa13.5□□□□□ -0.25
SSR4-210ENST00000485612 CPB2Q96IY4 423 aa13.5□□□□□ -0.25
SSR4-210ENST00000485612 SCNM1Q9BWG6 230 aa13.5□□□□□ -0.25
SSR4-210ENST00000485612 AVENQ9NQS1 362 aaPredicted RBP13.5□□□□□ -0.25
SSR4-210ENST00000485612 RBM12Q9NTZ6 932 aaKnown RBP13.5□□□□□ -0.25
SSR4-210ENST00000485612 GIT1Q9Y2X7 761 aa13.5□□□□□ -0.25
SSR4-210ENST00000485612 PFKFB2O60825 505 aa13.49□□□□□ -0.25
SSR4-210ENST00000485612 ERLIN2O94905 339 aa13.49□□□□□ -0.25
SSR4-210ENST00000485612 LARGE1O95461 756 aa13.49□□□□□ -0.25
SSR4-210ENST00000485612 GCFC2P16383 781 aaKnown RBP13.49□□□□□ -0.25
SSR4-210ENST00000485612 PTPN2P17706 415 aa13.49□□□□□ -0.25
SSR4-210ENST00000485612 PSMC3P17980 439 aa13.49□□□□□ -0.25
SSR4-210ENST00000485612 HOXA6P31267 233 aa13.49□□□□□ -0.25
SSR4-210ENST00000485612 HOXC13P31276 330 aa13.49□□□□□ -0.25
SSR4-210ENST00000485612 RFC5P40937 340 aa13.49□□□□□ -0.25
SSR4-210ENST00000485612 RBM25P49756 843 aaKnown RBP13.49□□□□□ -0.25
SSR4-210ENST00000485612 PDXDC1Q6P996 788 aa13.49□□□□□ -0.25
SSR4-210ENST00000485612 KBTBD6Q86V97 674 aa13.49□□□□□ -0.25
SSR4-210ENST00000485612 HACE1Q8IYU2 909 aa13.49□□□□□ -0.25
SSR4-210ENST00000485612 HASPINQ8TF76 798 aa13.49□□□□□ -0.25
SSR4-210ENST00000485612 GAB3Q8WWW8 586 aa13.49□□□□□ -0.25
SSR4-210ENST00000485612 VPS45Q9NRW7 570 aa13.49□□□□□ -0.25
SSR4-210ENST00000485612 C2orf42Q9NWW7 574 aa13.49□□□□□ -0.25
SSR4-210ENST00000485612 CACNG4Q9UBN1 327 aa13.49□□□□□ -0.25
SSR4-210ENST00000485612 CEP295Q9C0D2 2601 aa13.49□□□□□ -0.25
SSR4-210ENST00000485612 GREB1Q4ZG55 1949 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms