RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 COLGALT1Q8NBJ5 622 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 RDH13Q8NBN7 331 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 LRCH3Q96II8 777 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 MFSD14AQ96MC6 490 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 C17orf80Q9BSJ5 609 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 ANO10Q9NW15 660 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 DNAJB4Q9UDY4 337 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 FRMD4BQ9Y2L6 1034 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 C2CD2Q9Y426 696 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 LAMA3Q16787 3333 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 CETN3O15182 167 aa21.61■■□□□ 1.05
COL6A2-208ENST00000485591 AKAP3O75969 853 aa21.61■■□□□ 1.05
COL6A2-208ENST00000485591 NFICP08651 508 aa21.61■■□□□ 1.05
COL6A2-208ENST00000485591 BMPR1AP36894 532 aa21.61■■□□□ 1.05
COL6A2-208ENST00000485591 BCAR1P56945 870 aa21.61■■□□□ 1.05
COL6A2-208ENST00000485591 SPAG1Q07617 926 aa21.61■■□□□ 1.05
COL6A2-208ENST00000485591 PSMD6Q15008 389 aa21.61■■□□□ 1.05
COL6A2-208ENST00000485591 ZBTB6Q15916 424 aa21.61■■□□□ 1.05
COL6A2-208ENST00000485591 JADE1Q6IE81 842 aa21.61■■□□□ 1.05
COL6A2-208ENST00000485591 KIF12Q96FN5 646 aa21.61■■□□□ 1.05
COL6A2-208ENST00000485591 ZNF558Q96NG5 402 aa21.61■■□□□ 1.05
COL6A2-208ENST00000485591 DUSP9Q99956 384 aaKnown RBP21.61■■□□□ 1.05
COL6A2-208ENST00000485591 MKNK1Q9BUB5 465 aa21.61■■□□□ 1.05
COL6A2-208ENST00000485591 UBQLN1Q9UMX0 589 aaKnown RBP21.61■■□□□ 1.05
COL6A2-208ENST00000485591 C5orf67F2Z3F1 127 aa21.6■■□□□ 1.05
COL6A2-208ENST00000485591 XPOTO43592 962 aaKnown RBP21.6■■□□□ 1.05
COL6A2-208ENST00000485591 ERCC5P28715 1186 aaPredicted RBP21.6■■□□□ 1.05
COL6A2-208ENST00000485591 CTNNB1P35222 781 aa21.6■■□□□ 1.05
COL6A2-208ENST00000485591 STX17P56962 302 aa21.6■■□□□ 1.05
COL6A2-208ENST00000485591 TMEM132DQ14C87 1099 aa21.6■■□□□ 1.05
COL6A2-208ENST00000485591 EPC2Q52LR7 807 aa21.6■■□□□ 1.05
COL6A2-208ENST00000485591 GPR153Q6NV75 609 aa21.6■■□□□ 1.05
COL6A2-208ENST00000485591 KCNT2Q6UVM3 1135 aa21.6■■□□□ 1.05
COL6A2-208ENST00000485591 EFCAB13Q8IY85 973 aa21.6■■□□□ 1.05
COL6A2-208ENST00000485591 PLVAPQ9BX97 442 aa21.6■■□□□ 1.05
COL6A2-208ENST00000485591 ZNF576Q9H609 170 aa21.6■■□□□ 1.05
COL6A2-208ENST00000485591 PDE11AQ9HCR9 933 aa21.6■■□□□ 1.05
COL6A2-208ENST00000485591 PCDHB12Q9Y5F1 795 aa21.6■■□□□ 1.05
COL6A2-208ENST00000485591 SLC16A3O15427 465 aaKnown RBP21.59■■□□□ 1.05
COL6A2-208ENST00000485591 RB1P06400 928 aa21.59■■□□□ 1.05
COL6A2-208ENST00000485591 GALTP07902 379 aa21.59■■□□□ 1.05
COL6A2-208ENST00000485591 CYP3A5P20815 502 aa21.59■■□□□ 1.05
COL6A2-208ENST00000485591 PSMC2P35998 433 aaKnown RBP21.59■■□□□ 1.05
COL6A2-208ENST00000485591 SLC11A1P49279 550 aa21.59■■□□□ 1.05
COL6A2-208ENST00000485591 ALDH7A1P49419 539 aaKnown RBP21.59■■□□□ 1.05
COL6A2-208ENST00000485591 TYRO3Q06418 890 aa21.59■■□□□ 1.05
COL6A2-208ENST00000485591 SOX4Q06945 474 aaPredicted RBP21.59■■□□□ 1.05
COL6A2-208ENST00000485591 FAM186BQ8IYM0 893 aa21.59■■□□□ 1.05
COL6A2-208ENST00000485591 CSGALNACT2Q8N6G5 542 aa21.59■■□□□ 1.05
COL6A2-208ENST00000485591 C18orf25Q96B23 403 aaPredicted RBP21.59■■□□□ 1.05
COL6A2-208ENST00000485591 CEP63Q96MT8 703 aa21.59■■□□□ 1.05
COL6A2-208ENST00000485591 UROC1Q96N76 676 aa21.59■■□□□ 1.05
COL6A2-208ENST00000485591 MED15Q96RN5 788 aa21.59■■□□□ 1.05
COL6A2-208ENST00000485591 TUBGCP4Q9UGJ1 667 aa21.59■■□□□ 1.05
COL6A2-208ENST00000485591 MTUS1Q9ULD2 1270 aa21.59■■□□□ 1.05
COL6A2-208ENST00000485591 SYCE3A1L190 88 aa21.58■■□□□ 1.05
COL6A2-208ENST00000485591 CASTOR2A6NHX0 329 aa21.58■■□□□ 1.05
COL6A2-208ENST00000485591 ALDH2P05091 517 aa21.58■■□□□ 1.05
COL6A2-208ENST00000485591 PPM1AP35813 382 aa21.58■■□□□ 1.05
COL6A2-208ENST00000485591 PBX3P40426 434 aa21.58■■□□□ 1.05
COL6A2-208ENST00000485591 ZNF697Q5TEC3 545 aa21.58■■□□□ 1.05
COL6A2-208ENST00000485591 SPATA1Q5VX52 437 aa21.58■■□□□ 1.05
COL6A2-208ENST00000485591 INTS8Q75QN2 995 aaKnown RBP21.58■■□□□ 1.05
COL6A2-208ENST00000485591 WDR49Q8IV35 697 aa21.58■■□□□ 1.05
COL6A2-208ENST00000485591 SLC39A11Q8N1S5 342 aa21.58■■□□□ 1.05
COL6A2-208ENST00000485591 BEST2Q8NFU1 509 aa21.58■■□□□ 1.05
COL6A2-208ENST00000485591 EEF2KMTQ96G04 330 aa21.58■■□□□ 1.05
COL6A2-208ENST00000485591 CGRRF1Q99675 332 aa21.58■■□□□ 1.05
COL6A2-208ENST00000485591 GZF1Q9H116 711 aaPredicted RBP21.58■■□□□ 1.05
COL6A2-208ENST00000485591 TTYH1Q9H313 450 aaPredicted RBP21.58■■□□□ 1.05
COL6A2-208ENST00000485591 GOLGA2P5Q9HBQ8 144 aa21.58■■□□□ 1.05
COL6A2-208ENST00000485591 FAN1Q9Y2M0 1017 aa21.58■■□□□ 1.05
COL6A2-208ENST00000485591 NRP1O14786 923 aa21.57■■□□□ 1.04
COL6A2-208ENST00000485591 EPB41P11171 864 aaKnown RBP21.57■■□□□ 1.04
COL6A2-208ENST00000485591 LRPAP1P30533 357 aa21.57■■□□□ 1.04
COL6A2-208ENST00000485591 OR1G1P47890 313 aa21.57■■□□□ 1.04
COL6A2-208ENST00000485591 ENPEPQ07075 957 aa21.57■■□□□ 1.04
COL6A2-208ENST00000485591 ZSCAN23Q3MJ62 389 aa21.57■■□□□ 1.04
COL6A2-208ENST00000485591 FBXO22Q8NEZ5 403 aa21.57■■□□□ 1.04
COL6A2-208ENST00000485591 PLEKHO2Q8TD55 490 aa21.57■■□□□ 1.04
COL6A2-208ENST00000485591 TMC2Q8TDI7 906 aa21.57■■□□□ 1.04
COL6A2-208ENST00000485591 PARD3BQ8TEW8 1205 aa21.57■■□□□ 1.04
COL6A2-208ENST00000485591 CCDC127Q96BQ5 260 aa21.57■■□□□ 1.04
COL6A2-208ENST00000485591 DDX27Q96GQ7 796 aaKnown RBP21.57■■□□□ 1.04
COL6A2-208ENST00000485591 FNBP1Q96RU3 617 aa21.57■■□□□ 1.04
COL6A2-208ENST00000485591 PAAF1Q9BRP4 392 aa21.57■■□□□ 1.04
COL6A2-208ENST00000485591 FUCA2Q9BTY2 467 aa21.57■■□□□ 1.04
COL6A2-208ENST00000485591 C11orf84Q9BUA3 381 aaPredicted RBP21.57■■□□□ 1.04
COL6A2-208ENST00000485591 INTS13Q9NVM9 706 aa21.57■■□□□ 1.04
COL6A2-208ENST00000485591 SPG21Q9NZD8 308 aa21.57■■□□□ 1.04
COL6A2-208ENST00000485591 CACNG4Q9UBN1 327 aa21.57■■□□□ 1.04
COL6A2-208ENST00000485591 ATG2AQ2TAZ0 1938 aa21.57■■□□□ 1.04
COL6A2-208ENST00000485591 PTPRJQ12913 1337 aa21.56■■□□□ 1.04
COL6A2-208ENST00000485591 LAMA2P24043 3122 aaKnown RBP21.56■■□□□ 1.04
COL6A2-208ENST00000485591 CCDC192P0DO97 292 aa21.56■■□□□ 1.04
COL6A2-208ENST00000485591 DLATP10515 647 aaKnown RBP21.56■■□□□ 1.04
COL6A2-208ENST00000485591 RPL9P32969 192 aaKnown RBP21.56■■□□□ 1.04
COL6A2-208ENST00000485591 FXR1P51114 621 aaKnown RBP eCLIP21.56■■□□□ 1.04
COL6A2-208ENST00000485591 MCCD1P59942 119 aaPredicted RBP21.56■■□□□ 1.04
COL6A2-208ENST00000485591 CLDN10P78369 228 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms