RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 GPC5P78333 572 aa11.67□□□□□ -0.54
HMGN1-215ENST00000485550 HMGN5P82970 282 aaKnown RBP11.67□□□□□ -0.54
HMGN1-215ENST00000485550 UBXN2BQ14CS0 331 aa11.67□□□□□ -0.54
HMGN1-215ENST00000485550 FUT10Q6P4F1 479 aa11.67□□□□□ -0.54
HMGN1-215ENST00000485550 C4orf32Q8N8J7 132 aa11.67□□□□□ -0.54
HMGN1-215ENST00000485550 HASPINQ8TF76 798 aa11.67□□□□□ -0.54
HMGN1-215ENST00000485550 ATRIPQ8WXE1 791 aa11.67□□□□□ -0.54
HMGN1-215ENST00000485550 KIFC3Q9BVG8 833 aa11.67□□□□□ -0.54
HMGN1-215ENST00000485550 CXCL16Q9H2A7 254 aa11.67□□□□□ -0.54
HMGN1-215ENST00000485550 FZD8Q9H461 694 aa11.67□□□□□ -0.54
HMGN1-215ENST00000485550 SLC2A4RGQ9NR83 387 aa11.67□□□□□ -0.54
HMGN1-215ENST00000485550 PRMT7Q9NVM4 692 aaPredicted RBP11.67□□□□□ -0.54
HMGN1-215ENST00000485550 SNTG2Q9NY99 539 aa11.67□□□□□ -0.54
HMGN1-215ENST00000485550 STK39Q9UEW8 545 aa11.67□□□□□ -0.54
HMGN1-215ENST00000485550 LRWD1Q9UFC0 647 aa11.67□□□□□ -0.54
HMGN1-215ENST00000485550 SMG5Q9UPR3 1016 aaKnown RBP11.67□□□□□ -0.54
HMGN1-215ENST00000485550 ZFHX4Q86UP3 3567 aa11.67□□□□□ -0.54
HMGN1-215ENST00000485550 SPAG17Q6Q759 2223 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 KANSL1LA0AUZ9 987 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 CASTOR2A6NHX0 329 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 PRR5-ARHGAP8B1AHC4 643 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 ANHXE9PGG2 379 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 TADA2AO75478 443 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 EFEMP2O95967 443 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 EDN1P05305 212 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 PRKCBP05771 671 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 ARHGAP8P85298 464 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 DSG1Q02413 1049 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 PRPF4BQ13523 1007 aaKnown RBP11.66□□□□□ -0.54
HMGN1-215ENST00000485550 MAPK6Q16659 721 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 ZNF528Q3MIS6 628 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 EEF1DP3Q658K8 133 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 CDCA2Q69YH5 1023 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-215ENST00000485550 ELMSAN1Q6PJG2 1045 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 TSSK4Q6SA08 328 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 CYP26C1Q6V0L0 522 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 RNF168Q8IYW5 571 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-215ENST00000485550 GPR161Q8N6U8 529 aaKnown RBP11.66□□□□□ -0.54
HMGN1-215ENST00000485550 DEPTORQ8TB45 409 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 FGF14Q92915 247 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 SECISBP2LQ93073 1101 aaKnown RBP11.66□□□□□ -0.54
HMGN1-215ENST00000485550 SHDQ96IW2 340 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 CHAMP1Q96JM3 812 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 PRIMPOLQ96LW4 560 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 RTKNQ9BST9 563 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 BCO2Q9BYV7 579 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 NT5C3AQ9H0P0 336 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 C2orf40Q9H1Z8 148 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 BHMT2Q9H2M3 363 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 PDZD7Q9H5P4 517 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 RXFP1Q9HBX9 757 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 SH2B1Q9NRF2 756 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-215ENST00000485550 RALYQ9UKM9 306 aaKnown RBP11.66□□□□□ -0.54
HMGN1-215ENST00000485550 FBXO4Q9UKT5 387 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 NOL7Q9UMY1 257 aaKnown RBP11.66□□□□□ -0.54
HMGN1-215ENST00000485550 KIAA1024Q9UPX6 916 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 SSX2IPQ9Y2D8 614 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 GDAQ9Y2T3 454 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 PCDHB6Q9Y5E3 794 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 TRIP11Q15643 1979 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 VWA8A3KMH1 1905 aa11.66□□□□□ -0.54
HMGN1-215ENST00000485550 FAM208BQ5VWN6 2430 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 PP2D1A8MPX8 630 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 N4BP3O15049 544 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 ADRB1P08588 477 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 CD72P21854 359 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 CDC25AP30304 524 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 NAMPTP43490 491 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 TOB1P50616 345 aaPredicted RBP11.65□□□□□ -0.54
HMGN1-215ENST00000485550 LMNB2Q03252 620 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 GRIK3Q13003 919 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 PTGDRQ13258 359 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 ORC2Q13416 577 aaPredicted RBP11.65□□□□□ -0.54
HMGN1-215ENST00000485550 FAM187BQ17R55 369 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 USP41Q3LFD5 358 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 C8orf34Q49A92 452 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 HAUS3Q68CZ6 603 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 PRSS55Q6UWB4 352 aaPredicted RBP11.65□□□□□ -0.54
HMGN1-215ENST00000485550 PARM1Q6UWI2 310 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 CEP57Q86XR8 500 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 SNX29Q8TEQ0 813 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 RHOBTB2Q9BYZ6 727 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 PARD6AQ9NPB6 346 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 CHST7Q9NS84 486 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 DDX19AQ9NUU7 478 aaKnown RBP11.65□□□□□ -0.54
HMGN1-215ENST00000485550 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.65□□□□□ -0.54
HMGN1-215ENST00000485550 DPP7Q9UHL4 492 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 ADAM28Q9UKQ2 775 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 PCDHGA2Q9Y5H1 932 aa11.65□□□□□ -0.54
HMGN1-215ENST00000485550 PDCD11Q14690 1871 aaKnown RBP11.65□□□□□ -0.54
HMGN1-215ENST00000485550 ARID2Q68CP9 1835 aa11.65□□□□□ -0.55
HMGN1-215ENST00000485550 TICRRQ7Z2Z1 1910 aa11.64□□□□□ -0.55
HMGN1-215ENST00000485550 ATRXP46100 2492 aa11.64□□□□□ -0.55
HMGN1-215ENST00000485550 FAM170BA6NMN3 283 aa11.64□□□□□ -0.55
HMGN1-215ENST00000485550 E9PMD0 336 aa11.64□□□□□ -0.55
HMGN1-215ENST00000485550 ACKR2O00590 384 aa11.64□□□□□ -0.55
HMGN1-215ENST00000485550 PTGESO14684 152 aa11.64□□□□□ -0.55
HMGN1-215ENST00000485550 TGM5O43548 720 aa11.64□□□□□ -0.55
HMGN1-215ENST00000485550 RECQL4O94761 1208 aa11.64□□□□□ -0.55
HMGN1-215ENST00000485550 THP07101 528 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms