RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 SRGAP1Q7Z6B7 1085 aa6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 NBPF11Q86T75 865 aa6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 TMTC2Q8N394 836 aa6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 SDR42E1Q8WUS8 393 aa6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 COPS5Q92905 334 aa6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 CCDC17Q96LX7 622 aa6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 CSRNP2Q9H175 543 aa6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 ASCC2Q9H1I8 757 aaPredicted RBP6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 ZCCHC17Q9NP64 241 aaKnown RBP6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 TOPORSQ9NS56 1045 aaPredicted RBP6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 DIAPH3Q9NSV4 1193 aa6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 CLEC1BQ9P126 229 aa6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 GTF2IRD1Q9UHL9 959 aa6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 IPPQ9Y573 584 aa6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 BACE2Q9Y5Z0 518 aa6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 ZMYM6O95789 1325 aa6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 RAD50Q92878 1312 aa6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 DDX60LQ5H9U9 1706 aaKnown RBP6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 SIPA1L1O43166 1804 aa6.39□□□□□ -1.39
NHLRC3-205ENST00000485407 CACNA1GO43497 2377 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 ABHD14A-ACY1A0A1B0GW23 586 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 MEGF11A6BM72 1044 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 C1QTNF9BB2RNN3 333 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 TPP1O14773 563 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 SIGLEC6O43699 453 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 PRKAB2O43741 272 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 PQBP1O60828 265 aaKnown RBP6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 ZRANB2O95218 330 aaKnown RBP eCLIP6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 PRAMEF1O95521 474 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 CHGBP05060 677 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 SLC3A2P08195 630 aaKnown RBP6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 PCP11498 1178 aaKnown RBP6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 CETPP11597 493 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 PLS3P13797 630 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 ZKSCAN1P17029 563 aaPredicted RBP6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 LSP1P33241 339 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 BMP8BP34820 402 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 GPR3P46089 330 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 SEPHS1P49903 392 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 NMIQ13287 307 aaPredicted RBP6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 KCNAB2Q13303 367 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 SNAPC2Q13487 334 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 SLC9A5Q14940 896 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 TERF2Q15554 542 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 ZNF174Q15697 407 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 CRY1Q16526 586 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 CERKLQ49MI3 558 aaPredicted RBP6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 E4F1Q66K89 784 aaPredicted RBP6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 CWC27Q6UX04 472 aaKnown RBP6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 KRBA2Q6ZNG9 492 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 CCDC149Q6ZUS6 474 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 FASTKD5Q7L8L6 764 aaKnown RBP6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 CD163Q86VB7 1156 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 RASSF3Q86WH2 238 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 GRAMD1CQ8IYS0 662 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 MIER2Q8N344 545 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 ZBTB34Q8NCN2 500 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 POF1BQ8WVV4 589 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 ZKSCAN4Q969J2 545 aaPredicted RBP6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 OPTNQ96CV9 577 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 ERO1AQ96HE7 468 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 CLMNQ96JQ2 1002 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 SEC62Q99442 399 aaKnown RBP6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 PLVAPQ9BX97 442 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 NAPBQ9H115 298 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 IPPKQ9H8X2 491 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 GPATCH2Q9NW75 528 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 FZD1Q9UP38 647 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 CCDC171Q6TFL3 1326 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 DOCK1Q14185 1865 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 BDP1A6H8Y1 2624 aa6.38□□□□□ -1.39
NHLRC3-205ENST00000485407 ATAD5Q96QE3 1844 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 ROBO3Q96MS0 1386 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 A0A0D9SFI3 127 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 C19orf81C9J6K1 198 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 FAM47E-STBD1D6RA91 191 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 AURKAO14965 403 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 DEAF1O75398 565 aaPredicted RBP6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 SLITRK5O94991 958 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 GSNP06396 782 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 HSPD1P10809 573 aaKnown RBP6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 SLC9A1P19634 815 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 CHMLP26374 656 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 SHMT1P34896 483 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 CHRNA4P43681 627 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 NOP2P46087 812 aaKnown RBP6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 TDO2P48775 406 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 SARSP49591 514 aaKnown RBP6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 ALDH5A1P51649 535 aaPredicted RBP6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 SLC9C1Q4G0N8 1177 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 CREB3L3Q68CJ9 461 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 IQCEQ6IPM2 695 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 CASC1Q6TDU7 716 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 TMEM179Q6ZVK1 233 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 C16orf59Q7L2K0 433 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 UBE2Q1Q7Z7E8 422 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 MYLK4Q86YV6 388 aaPredicted RBP6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 KSR1Q8IVT5 923 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 CCDC103Q8IW40 242 aa6.37□□□□□ -1.39
NHLRC3-205ENST00000485407 FAM43AQ8N2R8 423 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms