RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	AKAP5	P24588	427 aa		4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	SCAND1	P57086	179 aa		4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	TMEM132B	Q14DG7	1078 aa		4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	BRD3	Q15059	726 aa		4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	CLUL1	Q15846	466 aa		4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	PPP4R4	Q6NUP7	873 aa		4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	C14orf80	Q86SX3	495 aa		4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	DGKH	Q86XP1	1220 aa		4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	PHYKPL	Q8IUZ5	450 aa		4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	C7orf31	Q8N865	590 aa		4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	ZNF384	Q8TF68	577 aa		4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	RSAD2	Q8WXG1	361 aa		4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	ST8SIA2	Q92186	375 aa		4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	SLC46A2	Q9BY10	475 aa		4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	ZNF700	Q9H0M5	742 aa		4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	KCNH6	Q9H252	994 aa		4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	ZNF70	Q9UC06	446 aa	Predicted RBP	4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	NOB1	Q9ULX3	412 aa	Known RBP	4.98	□□□□□ -1.61
VPS8-223	ENST00000485024	CLASP1	Q7Z460	1538 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	IFT140	Q96RY7	1462 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	TRIM38	O00635	465 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	FOXP2	O15409	715 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	TOM1	O60784	492 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	MAF	O75444	373 aa	Predicted RBP	4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	STC2	O76061	302 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	IL33	O95760	270 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	ENPP1	P22413	925 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	SLC5A3	P53794	718 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	UBE4A	Q14139	1066 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	SEC23A	Q15436	765 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	FSCN1	Q16658	493 aa	Known RBP	4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	SLC4A10	Q6U841	1118 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	SH2D3C	Q8N5H7	860 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	TTC17	Q96AE7	1141 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	RAX2	Q96IS3	184 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	FAM193B	Q96PV7	902 aa	Predicted RBP	4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	ORAI2	Q96SN7	254 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	ZMAT4	Q9H898	229 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	ARNT2	Q9HBZ2	717 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	VTA1	Q9NP79	307 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	DKK2	Q9UBU2	259 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	MSRA	Q9UJ68	235 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	TLK1	Q9UKI8	766 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	ASB1	Q9Y576	335 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	CNTNAP2	Q9UHC6	1331 aa		4.97	□□□□□ -1.61
VPS8-223	ENST00000485024	ST20-MTHFS	A0A0A6YYL1	179 aa		4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	DVL2	O14641	736 aa		4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	KCNK3	O14649	394 aa		4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	H2AFY	O75367	372 aa	Known RBP	4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	PEX14	O75381	377 aa		4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	HKR1	P10072	659 aa		4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	GPR3	P46089	330 aa		4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	ACAP2	Q15057	778 aa		4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	GAGE13	Q4V321	117 aa		4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	MIER2	Q8N344	545 aa		4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	SAMD3	Q8N6K7	520 aa		4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	ADGRE3	Q9BY15	652 aa		4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	NMRK2	Q9NPI5	230 aa		4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	DNAJC28	Q9NX36	388 aa		4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	MAGEL2	Q9UJ55	1249 aa		4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	RIPOR2	Q9Y4F9	1068 aa		4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	COMMD10	Q9Y6G5	202 aa		4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	CHD1	O14646	1710 aa		4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	HMGXB3	Q12766	1538 aa		4.96	□□□□□ -1.62
VPS8-223	ENST00000485024	ATAD2B	Q9ULI0	1458 aa		4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	UBA6	A0AVT1	1052 aa	Predicted RBP	4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	FZD9	O00144	591 aa		4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	PTX3	P26022	381 aa	Predicted RBP	4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	SESN2	P58004	480 aa	Predicted RBP	4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	RHBDL3	P58872	404 aa		4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	MRPS9	P82933	396 aa	Known RBP	4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	UGT8	Q16880	541 aa		4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	LONRF3	Q496Y0	759 aa		4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	MAP9	Q49MG5	647 aa		4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	TTC38	Q5R3I4	469 aa		4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	C11orf96	Q7Z7L8	435 aa		4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	HIPK4	Q8NE63	616 aa		4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	CALML6	Q8TD86	181 aa		4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	FERMT2	Q96AC1	680 aa		4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	ZBTB9	Q96C00	473 aa		4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	GBP4	Q96PP9	640 aa		4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	RPS6KC1	Q96S38	1066 aa		4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	C1orf112	Q9NSG2	853 aa		4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	OBP2A	Q9NY56	170 aa		4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	DIP2B	Q9P265	1576 aa		4.95	□□□□□ -1.62
VPS8-223	ENST00000485024	LRRC3C	A6NJW4	275 aa		4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	VSTM5	A8MXK1	200 aa		4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	DTNB	O60941	627 aa		4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	OFD1	O75665	1012 aa		4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	NCR1	O76036	304 aa		4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	NBPF7	P0C2Y1	421 aa	Predicted RBP	4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	PHKG2	P15735	406 aa		4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	SLC16A1	P53985	500 aa		4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	ADK	P55263	362 aa	Known RBP	4.94	□□□□□ -1.62
VPS8-223	ENST00000485024	ROM1	Q03395	351 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms