RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 PROZP22891 400 aa5.63□□□□□ -1.51
SMC4-215ENST00000484799 MCAMP43121 646 aa5.63□□□□□ -1.51
SMC4-215ENST00000484799 CSRP2Q16527 193 aa5.63□□□□□ -1.51
SMC4-215ENST00000484799 KRT26Q7Z3Y9 468 aa5.63□□□□□ -1.51
SMC4-215ENST00000484799 RSPH3Q86UC2 560 aa5.63□□□□□ -1.51
SMC4-215ENST00000484799 COLGALT2Q8IYK4 626 aa5.63□□□□□ -1.51
SMC4-215ENST00000484799 AFAP1L2Q8N4X5 818 aa5.63□□□□□ -1.51
SMC4-215ENST00000484799 FITM2Q8N6M3 262 aa5.63□□□□□ -1.51
SMC4-215ENST00000484799 GALNT9Q9HCQ5 603 aa5.63□□□□□ -1.51
SMC4-215ENST00000484799 DMRT3Q9NQL9 472 aa5.63□□□□□ -1.51
SMC4-215ENST00000484799 GPR39O43194 453 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 PRKD3O94806 890 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 SPDEFO95238 335 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 ESRRBO95718 433 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 CKBP12277 381 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 ZFP36P26651 326 aaKnown RBP5.62□□□□□ -1.51
SMC4-215ENST00000484799 CD38P28907 300 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 GPR3P46089 330 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 SEC24CP53992 1094 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 ACAP2Q15057 778 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 PGM2L1Q6PCE3 622 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 PCSK4Q6UW60 755 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 UBE3BQ7Z3V4 1068 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 KCNK18Q7Z418 384 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 SLC44A3Q8N4M1 653 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 NLGN4YQ8NFZ3 816 aaPredicted RBP5.62□□□□□ -1.51
SMC4-215ENST00000484799 ORAI2Q96SN7 254 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 KIAA1586Q9HCI6 787 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 KLHL11Q9NVR0 708 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 LRIT1Q9P2V4 623 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 RUVBL1Q9Y265 456 aaKnown RBP5.62□□□□□ -1.51
SMC4-215ENST00000484799 GPR45Q9Y5Y3 372 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 ACTL7AQ9Y615 435 aa5.62□□□□□ -1.51
SMC4-215ENST00000484799 KIAA0391O15091 583 aaKnown RBP5.61□□□□□ -1.51
SMC4-215ENST00000484799 GPR32O75388 356 aa5.61□□□□□ -1.51
SMC4-215ENST00000484799 FDXRP22570 491 aa5.61□□□□□ -1.51
SMC4-215ENST00000484799 ADRA1BP35368 520 aa5.61□□□□□ -1.51
SMC4-215ENST00000484799 MRPS21P82921 87 aaKnown RBP5.61□□□□□ -1.51
SMC4-215ENST00000484799 OTUD7BQ6GQQ9 843 aa5.61□□□□□ -1.51
SMC4-215ENST00000484799 PNPLA7Q6ZV29 1317 aa5.61□□□□□ -1.51
SMC4-215ENST00000484799 ADGRG3Q86Y34 549 aa5.61□□□□□ -1.51
SMC4-215ENST00000484799 RHOT1Q8IXI2 618 aa5.61□□□□□ -1.51
SMC4-215ENST00000484799 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.61□□□□□ -1.51
SMC4-215ENST00000484799 CASKIN2Q8WXE0 1202 aa5.61□□□□□ -1.51
SMC4-215ENST00000484799 PTCD3Q96EY7 689 aaKnown RBP5.61□□□□□ -1.51
SMC4-215ENST00000484799 PNKPQ96T60 521 aa5.61□□□□□ -1.51
SMC4-215ENST00000484799 ZSWIM1Q9BR11 485 aa5.61□□□□□ -1.51
SMC4-215ENST00000484799 GSTO2Q9H4Y5 243 aa5.61□□□□□ -1.51
SMC4-215ENST00000484799 CCM2LQ9NUG4 571 aaPredicted RBP5.61□□□□□ -1.51
SMC4-215ENST00000484799 MKS1Q9NXB0 559 aa5.61□□□□□ -1.51
SMC4-215ENST00000484799 INTUQ9ULD6 942 aa5.61□□□□□ -1.51
SMC4-215ENST00000484799 EPN1Q9Y6I3 576 aaPredicted RBP5.61□□□□□ -1.51
SMC4-215ENST00000484799 SPATA31A6Q5VVP1 1343 aa5.6□□□□□ -1.51
SMC4-215ENST00000484799 MYBBP1AQ9BQG0 1328 aaKnown RBP5.6□□□□□ -1.51
SMC4-215ENST00000484799 ORC4O43929 436 aa5.6□□□□□ -1.51
SMC4-215ENST00000484799 EGR2P11161 476 aaPredicted RBP5.6□□□□□ -1.51
SMC4-215ENST00000484799 TGM1P22735 817 aa5.6□□□□□ -1.51
SMC4-215ENST00000484799 ALDH1A3P47895 512 aa5.6□□□□□ -1.51
SMC4-215ENST00000484799 HSD11B2P80365 405 aa5.6□□□□□ -1.51
SMC4-215ENST00000484799 COL10A1Q03692 680 aa5.6□□□□□ -1.51
SMC4-215ENST00000484799 MIGA2Q7L4E1 593 aa5.6□□□□□ -1.51
SMC4-215ENST00000484799 ASB10Q8WXI3 467 aa5.6□□□□□ -1.51
SMC4-215ENST00000484799 BOD1Q96IK1 185 aa5.6□□□□□ -1.51
SMC4-215ENST00000484799 Q96MF0 132 aa5.6□□□□□ -1.51
SMC4-215ENST00000484799 SLC2A13Q96QE2 648 aa5.6□□□□□ -1.51
SMC4-215ENST00000484799 SLC5A4Q9NY91 659 aa5.6□□□□□ -1.51
SMC4-215ENST00000484799 MRFAP1Q9Y605 127 aa5.6□□□□□ -1.51
SMC4-215ENST00000484799 ATRNL1Q5VV63 1379 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 AATKQ6ZMQ8 1374 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 TCRBV7S2A1N4TA0A589 114 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 MASP2O00187 686 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 EYA4O95677 639 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 RPLP2P05387 115 aaKnown RBP5.59□□□□□ -1.51
SMC4-215ENST00000484799 DDCP20711 480 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 FGFR4P22455 802 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 PLA2G5P39877 138 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 SLC16A1P53985 500 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 ELLP55199 621 aaPredicted RBP5.59□□□□□ -1.51
SMC4-215ENST00000484799 CXADRP78310 365 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 MGAT2Q10469 447 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 KLF1Q13351 362 aaPredicted RBP5.59□□□□□ -1.51
SMC4-215ENST00000484799 AOPEPQ8N6M6 819 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 TBC1D15Q8TC07 691 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 COG1Q8WTW3 980 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 LINC00476Q8WZB0 136 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 DPF2Q92785 391 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 HEPHQ9BQS7 1158 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 DUSP26Q9BV47 211 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 SCOCQ9UIL1 159 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 TLK1Q9UKI8 766 aa5.59□□□□□ -1.51
SMC4-215ENST00000484799 GCSHP23434 173 aa5.58□□□□□ -1.52
SMC4-215ENST00000484799 MRPS35P82673 323 aaKnown RBP5.58□□□□□ -1.52
SMC4-215ENST00000484799 PPP3CAQ08209 521 aa5.58□□□□□ -1.52
SMC4-215ENST00000484799 RNF187Q5TA31 235 aaPredicted RBP5.58□□□□□ -1.52
SMC4-215ENST00000484799 METRNLQ641Q3 311 aa5.58□□□□□ -1.52
SMC4-215ENST00000484799 SYCE2Q6PIF2 218 aa5.58□□□□□ -1.52
SMC4-215ENST00000484799 RD3Q7Z3Z2 195 aa5.58□□□□□ -1.52
SMC4-215ENST00000484799 NUP133Q8WUM0 1156 aa5.58□□□□□ -1.52
SMC4-215ENST00000484799 SSH1Q8WYL5 1049 aa5.58□□□□□ -1.52
SMC4-215ENST00000484799 MARS2Q96GW9 593 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms