RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 TRIP11Q15643 1979 aa22.1■■□□□ 1.13
VCPKMT-203ENST00000484763 MGEA5O60502 916 aa22.1■■□□□ 1.13
VCPKMT-203ENST00000484763 TNNC2P02585 160 aa22.1■■□□□ 1.13
VCPKMT-203ENST00000484763 NFICP08651 508 aa22.1■■□□□ 1.13
VCPKMT-203ENST00000484763 APBA1Q02410 837 aa22.1■■□□□ 1.13
VCPKMT-203ENST00000484763 JADE1Q6IE81 842 aa22.1■■□□□ 1.13
VCPKMT-203ENST00000484763 CACNA2D4Q7Z3S7 1137 aa22.1■■□□□ 1.13
VCPKMT-203ENST00000484763 NT5DC4Q86YG4 428 aa22.1■■□□□ 1.13
VCPKMT-203ENST00000484763 LRRC8AQ8IWT6 810 aa22.1■■□□□ 1.13
VCPKMT-203ENST00000484763 ZNF397Q8NF99 534 aaPredicted RBP22.1■■□□□ 1.13
VCPKMT-203ENST00000484763 APEX2Q9UBZ4 518 aa22.1■■□□□ 1.13
VCPKMT-203ENST00000484763 TBX21Q9UL17 535 aa22.1■■□□□ 1.13
VCPKMT-203ENST00000484763 DAAM1Q9Y4D1 1078 aa22.1■■□□□ 1.13
VCPKMT-203ENST00000484763 UMODL1Q5DID0 1318 aa22.1■■□□□ 1.13
VCPKMT-203ENST00000484763 RNF225M0QZC1 329 aaPredicted RBP22.09■■□□□ 1.13
VCPKMT-203ENST00000484763 NBNO60934 754 aa22.09■■□□□ 1.13
VCPKMT-203ENST00000484763 PARNO95453 639 aaKnown RBP22.09■■□□□ 1.13
VCPKMT-203ENST00000484763 CLTBP09497 229 aa22.09■■□□□ 1.13
VCPKMT-203ENST00000484763 UCHL3P15374 230 aa22.09■■□□□ 1.13
VCPKMT-203ENST00000484763 AKAP5P24588 427 aa22.09■■□□□ 1.13
VCPKMT-203ENST00000484763 KRT9P35527 623 aa22.09■■□□□ 1.13
VCPKMT-203ENST00000484763 PIK3CAP42336 1068 aa22.09■■□□□ 1.13
VCPKMT-203ENST00000484763 POLR2FP61218 127 aaKnown RBP22.09■■□□□ 1.13
VCPKMT-203ENST00000484763 ZBED6P86452 979 aa22.09■■□□□ 1.13
VCPKMT-203ENST00000484763 TMEM132DQ14C87 1099 aa22.09■■□□□ 1.13
VCPKMT-203ENST00000484763 CACTINQ8WUQ7 758 aaKnown RBP22.09■■□□□ 1.13
VCPKMT-203ENST00000484763 SEMA4DQ92854 862 aa22.09■■□□□ 1.13
VCPKMT-203ENST00000484763 ADAM2Q99965 735 aa22.09■■□□□ 1.13
VCPKMT-203ENST00000484763 PARP2Q9UGN5 583 aa22.09■■□□□ 1.13
VCPKMT-203ENST00000484763 DERAQ9Y315 318 aa22.09■■□□□ 1.13
VCPKMT-203ENST00000484763 PHACTR2O75167 634 aa22.08■■□□□ 1.13
VCPKMT-203ENST00000484763 HLA-DRAP01903 254 aa22.08■■□□□ 1.13
VCPKMT-203ENST00000484763 RFX1P22670 979 aa22.08■■□□□ 1.13
VCPKMT-203ENST00000484763 PANX2Q96RD6 677 aa22.08■■□□□ 1.13
VCPKMT-203ENST00000484763 FTHL17Q9BXU8 183 aa22.08■■□□□ 1.13
VCPKMT-203ENST00000484763 PPP1R12CQ9BZL4 782 aa22.08■■□□□ 1.13
VCPKMT-203ENST00000484763 RNF39Q9H2S5 420 aa22.08■■□□□ 1.13
VCPKMT-203ENST00000484763 ABHD10Q9NUJ1 306 aa22.08■■□□□ 1.13
VCPKMT-203ENST00000484763 CNTN3Q9P232 1028 aa22.08■■□□□ 1.13
VCPKMT-203ENST00000484763 VNN1O95497 513 aa22.08■■□□□ 1.12
VCPKMT-203ENST00000484763 ALKAL1Q6UXT8 129 aa22.08■■□□□ 1.12
VCPKMT-203ENST00000484763 FAM43BQ6ZT52 329 aaPredicted RBP22.08■■□□□ 1.12
VCPKMT-203ENST00000484763 TRAPPC11Q7Z392 1133 aa22.08■■□□□ 1.12
VCPKMT-203ENST00000484763 DNAJC7Q99615 494 aa22.08■■□□□ 1.12
VCPKMT-203ENST00000484763 NLRC4Q9NPP4 1024 aa22.08■■□□□ 1.12
VCPKMT-203ENST00000484763 TMEM39AQ9NV64 488 aa22.08■■□□□ 1.12
VCPKMT-203ENST00000484763 FHOD1Q9Y613 1164 aa22.08■■□□□ 1.12
VCPKMT-203ENST00000484763 A0A0U1RQF3 1178 aa22.07■■□□□ 1.12
VCPKMT-203ENST00000484763 ZNF623O75123 536 aa22.07■■□□□ 1.12
VCPKMT-203ENST00000484763 ZC3H11AO75152 810 aaKnown RBP eCLIP22.07■■□□□ 1.12
VCPKMT-203ENST00000484763 SKIP12755 728 aa22.07■■□□□ 1.12
VCPKMT-203ENST00000484763 ITGA4P13612 1032 aa22.07■■□□□ 1.12
VCPKMT-203ENST00000484763 BAP1Q92560 729 aa22.07■■□□□ 1.12
VCPKMT-203ENST00000484763 KIF12Q96FN5 646 aa22.07■■□□□ 1.12
VCPKMT-203ENST00000484763 TSPAN18Q96SJ8 248 aa22.07■■□□□ 1.12
VCPKMT-203ENST00000484763 WNT8AQ9H1J5 351 aa22.07■■□□□ 1.12
VCPKMT-203ENST00000484763 KCNF1Q9H3M0 494 aa22.07■■□□□ 1.12
VCPKMT-203ENST00000484763 SCN5AQ14524 2016 aa22.07■■□□□ 1.12
VCPKMT-203ENST00000484763 LRRN2O75325 713 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 NCOA4Q13772 614 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 GPNMBQ14956 572 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 PLEKHG4Q58EX7 1191 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 MRPL10Q7Z7H8 261 aaKnown RBP22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 CCDC112Q8NEF3 446 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 OR8K1Q8NGG5 319 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 ZNF830Q96NB3 372 aaPredicted RBP22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 NT5C1BQ96P26 610 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 RGS18Q9NS28 235 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 NRDCO43847 1150 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 EN2P19622 333 aaPredicted RBP22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 CCL23P55773 120 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 LRMPQ12912 555 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 TSR1Q2NL82 804 aaKnown RBP22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 XKR4Q5GH76 650 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 IQCEQ6IPM2 695 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 PHLDB3Q6NSJ2 640 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 GJB7Q6PEY0 223 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 RRAGAQ7L523 313 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 UBE2Q1Q7Z7E8 422 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 SEPT8Q92599 483 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 APBB2Q92870 758 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 SCLYQ96I15 445 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 NAA15Q9BXJ9 866 aaKnown RBP22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 IMPG2Q9BZV3 1241 aa22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 NUCKS1Q9H1E3 243 aaKnown RBP22.06■■□□□ 1.12
VCPKMT-203ENST00000484763 CYP2C18P33260 490 aa22.05■■□□□ 1.12
VCPKMT-203ENST00000484763 TRPC3Q13507 836 aa22.05■■□□□ 1.12
VCPKMT-203ENST00000484763 WDR44Q5JSH3 913 aa22.05■■□□□ 1.12
VCPKMT-203ENST00000484763 PDXDC1Q6P996 788 aa22.05■■□□□ 1.12
VCPKMT-203ENST00000484763 PGBD4Q96DM1 585 aa22.05■■□□□ 1.12
VCPKMT-203ENST00000484763 ZMAT2Q96NC0 199 aaKnown RBP22.05■■□□□ 1.12
VCPKMT-203ENST00000484763 SPAG5Q96R06 1193 aa22.05■■□□□ 1.12
VCPKMT-203ENST00000484763 TSPYL2Q9H2G4 693 aaPredicted RBP22.05■■□□□ 1.12
VCPKMT-203ENST00000484763 C1orf112Q9NSG2 853 aa22.05■■□□□ 1.12
VCPKMT-203ENST00000484763 KLK14Q9P0G3 267 aa22.05■■□□□ 1.12
VCPKMT-203ENST00000484763 DNAJC12Q9UKB3 198 aa22.05■■□□□ 1.12
VCPKMT-203ENST00000484763 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.05■■□□□ 1.12
VCPKMT-203ENST00000484763 LRRC53A6NM62 1247 aa22.04■■□□□ 1.12
VCPKMT-203ENST00000484763 CXCL10P02778 98 aa22.04■■□□□ 1.12
VCPKMT-203ENST00000484763 KCNE1P15382 129 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms