RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 XYLBO75191 536 aa12.57□□□□□ -0.4
SCFD1-206ENST00000484733 KCNE1P15382 129 aa12.57□□□□□ -0.4
SCFD1-206ENST00000484733 ATP2C1P98194 919 aaPredicted RBP12.57□□□□□ -0.4
SCFD1-206ENST00000484733 ANKS3Q6ZW76 656 aa12.57□□□□□ -0.4
SCFD1-206ENST00000484733 SIX5Q8N196 739 aa12.57□□□□□ -0.4
SCFD1-206ENST00000484733 FLCNQ8NFG4 579 aa12.57□□□□□ -0.4
SCFD1-206ENST00000484733 RUSC1Q9BVN2 902 aa12.57□□□□□ -0.4
SCFD1-206ENST00000484733 CDH7Q9ULB5 785 aa12.57□□□□□ -0.4
SCFD1-206ENST00000484733 TRIP11Q15643 1979 aa12.57□□□□□ -0.4
SCFD1-206ENST00000484733 PP2D1A8MPX8 630 aa12.57□□□□□ -0.4
SCFD1-206ENST00000484733 ADAM12O43184 909 aa12.57□□□□□ -0.4
SCFD1-206ENST00000484733 GFRA3O60609 400 aa12.57□□□□□ -0.4
SCFD1-206ENST00000484733 B3GAT3O94766 335 aa12.57□□□□□ -0.4
SCFD1-206ENST00000484733 C8AP07357 584 aa12.57□□□□□ -0.4
SCFD1-206ENST00000484733 CLCNKBP51801 687 aa12.57□□□□□ -0.4
SCFD1-206ENST00000484733 PHLDB3Q6NSJ2 640 aa12.57□□□□□ -0.4
SCFD1-206ENST00000484733 MPZL3Q6UWV2 235 aa12.57□□□□□ -0.4
SCFD1-206ENST00000484733 GET4Q7L5D6 327 aaPredicted RBP12.57□□□□□ -0.4
SCFD1-206ENST00000484733 KCNK18Q7Z418 384 aa12.57□□□□□ -0.4
SCFD1-206ENST00000484733 KCND2Q9NZV8 630 aa12.57□□□□□ -0.4
SCFD1-206ENST00000484733 KRBA1A5PL33 1030 aa12.56□□□□□ -0.4
SCFD1-206ENST00000484733 PI15O43692 258 aa12.56□□□□□ -0.4
SCFD1-206ENST00000484733 RPL9P32969 192 aaKnown RBP12.56□□□□□ -0.4
SCFD1-206ENST00000484733 ZNF568Q3ZCX4 644 aa12.56□□□□□ -0.4
SCFD1-206ENST00000484733 ARL6IP4Q66PJ3 421 aaKnown RBP12.56□□□□□ -0.4
SCFD1-206ENST00000484733 GRASPQ7Z6J2 395 aaPredicted RBP12.56□□□□□ -0.4
SCFD1-206ENST00000484733 SYT2Q8N9I0 419 aaPredicted RBP12.56□□□□□ -0.4
SCFD1-206ENST00000484733 DTWD2Q8NBA8 298 aa12.56□□□□□ -0.4
SCFD1-206ENST00000484733 SNX27Q96L92 541 aa12.56□□□□□ -0.4
SCFD1-206ENST00000484733 ACAP3Q96P50 834 aa12.56□□□□□ -0.4
SCFD1-206ENST00000484733 PNMA5Q96PV4 448 aa12.56□□□□□ -0.4
SCFD1-206ENST00000484733 TARS2Q9BW92 718 aaKnown RBP12.56□□□□□ -0.4
SCFD1-206ENST00000484733 CNTN3Q9P232 1028 aa12.56□□□□□ -0.4
SCFD1-206ENST00000484733 KCNH3Q9ULD8 1083 aa12.56□□□□□ -0.4
SCFD1-206ENST00000484733 CFHP08603 1231 aa12.56□□□□□ -0.4
SCFD1-206ENST00000484733 OR1D2P34982 312 aa12.56□□□□□ -0.4
SCFD1-206ENST00000484733 SOX4Q06945 474 aaPredicted RBP12.56□□□□□ -0.4
SCFD1-206ENST00000484733 GLRA4Q5JXX5 417 aa12.56□□□□□ -0.4
SCFD1-206ENST00000484733 AXDND1Q5T1B0 1012 aaPredicted RBP12.56□□□□□ -0.4
SCFD1-206ENST00000484733 CEP120Q8N960 986 aa12.56□□□□□ -0.4
SCFD1-206ENST00000484733 AVENQ9NQS1 362 aaPredicted RBP12.56□□□□□ -0.4
SCFD1-206ENST00000484733 SYN3O14994 580 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 TBC1D4O60343 1298 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 PLS3P13797 630 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 IGFBP6P24592 240 aaPredicted RBP12.55□□□□□ -0.4
SCFD1-206ENST00000484733 TKTP29401 623 aaKnown RBP12.55□□□□□ -0.4
SCFD1-206ENST00000484733 CDC25AP30304 524 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 SLC8B1Q6J4K2 584 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 RSPO2Q6UXX9 243 aaPredicted RBP12.55□□□□□ -0.4
SCFD1-206ENST00000484733 MTSS1LQ765P7 747 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 C3orf58Q8NDZ4 430 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 TMX3Q96JJ7 454 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.55□□□□□ -0.4
SCFD1-206ENST00000484733 ARHGEF37A1IGU5 675 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 PODXLO00592 558 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 SLC16A4O15374 487 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 BRCC3P46736 316 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 SMTNP53814 917 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 SLC12A3P55017 1021 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 MRPL58Q14197 206 aaKnown RBP12.55□□□□□ -0.4
SCFD1-206ENST00000484733 TMEM119Q4V9L6 283 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 ZPBP2Q6X784 338 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 TMEM161BQ8NDZ6 487 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 SLC7A14Q8TBB6 771 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 ZMAT2Q96NC0 199 aaKnown RBP12.55□□□□□ -0.4
SCFD1-206ENST00000484733 GOLGA2P5Q9HBQ8 144 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 CDY1Q9Y6F8 540 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 NUMBLQ9Y6R0 609 aa12.55□□□□□ -0.4
SCFD1-206ENST00000484733 PDCD11Q14690 1871 aaKnown RBP12.54□□□□□ -0.4
SCFD1-206ENST00000484733 H0YCG3 227 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 H7C4K7 107 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 CCL16O15467 120 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 TOM1L1O75674 476 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 ABLIM3O94929 683 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 MAPTP10636 758 aaKnown RBP12.54□□□□□ -0.4
SCFD1-206ENST00000484733 SCP2P22307 547 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 MCM2P49736 904 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 NTHL1P78549 312 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 STRN3Q13033 797 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 MCTP1Q6DN14 999 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 GPR152Q8TDT2 470 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 MAFFQ9ULX9 164 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 CITO14578 2027 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 NOTCH4Q99466 2003 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 PRR23AA6NEV1 266 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 MEFVO15553 781 aaPredicted RBP12.54□□□□□ -0.4
SCFD1-206ENST00000484733 ZNF461Q8TAF7 563 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 FGF13Q92913 245 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 AK8Q96MA6 479 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 TCHPQ9BT92 498 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 TBC1D17Q9HA65 648 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 PLEKHA5Q9HAU0 1116 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 DNMT3BQ9UBC3 853 aaKnown RBP12.54□□□□□ -0.4
SCFD1-206ENST00000484733 CA14Q9ULX7 337 aa12.54□□□□□ -0.4
SCFD1-206ENST00000484733 MYH11P35749 1972 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 SFI1A8K8P3 1242 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 CENPBP07199 599 aaPredicted RBP12.53□□□□□ -0.4
SCFD1-206ENST00000484733 PLA2G4BP0C869 781 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 GJB2P29033 226 aa12.53□□□□□ -0.4
SCFD1-206ENST00000484733 NCKAP1LP55160 1127 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms