RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-240ENST00000484412 C2CD2Q9Y426 696 aa15.2■□□□□ 0.02
HDLBP-240ENST00000484412 CITO14578 2027 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 PLXNA4Q9HCM2 1894 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 TRIP11Q15643 1979 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 XPOTO43592 962 aaKnown RBP15.19■□□□□ 0.02
HDLBP-240ENST00000484412 GADD45BO75293 160 aaPredicted RBP15.19■□□□□ 0.02
HDLBP-240ENST00000484412 IL18RAPO95256 599 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 PAPLNO95428 1278 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 OR1G1P47890 313 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 ENPEPQ07075 957 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 SPATA1Q5VX52 437 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 FOXR2Q6PJQ5 311 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 TMEM173Q86WV6 379 aaPredicted RBP15.19■□□□□ 0.02
HDLBP-240ENST00000484412 GRAMD1CQ8IYS0 662 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 SYCP3Q8IZU3 236 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 GPD1LQ8N335 351 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 GUF1Q8N442 669 aaKnown RBP15.19■□□□□ 0.02
HDLBP-240ENST00000484412 EFHBQ8N7U6 833 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 KIAA0895Q8NCT3 520 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 GLIS3Q8NEA6 775 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 ATXN2LQ8WWM7 1075 aaKnown RBP15.19■□□□□ 0.02
HDLBP-240ENST00000484412 POMGNT1Q8WZA1 660 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 PABPC5Q96DU9 382 aaKnown RBP15.19■□□□□ 0.02
HDLBP-240ENST00000484412 KCTD10Q9H3F6 313 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 SLC39A2Q9NP94 309 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 ANKFY1Q9P2R3 1169 aa15.19■□□□□ 0.02
HDLBP-240ENST00000484412 C2orf71A6NGG8 1288 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 LACTBL1A8MY62 500 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 MAPK13O15264 365 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 TADA2AO75478 443 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 IBSPP21815 317 aaPredicted RBP15.18■□□□□ 0.02
HDLBP-240ENST00000484412 IRS1P35568 1242 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 TNFSF9P41273 254 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 OSTNP61366 133 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 DSG1Q02413 1049 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 SMC1AQ14683 1233 aaKnown RBP15.18■□□□□ 0.02
HDLBP-240ENST00000484412 USP41Q3LFD5 358 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 TMC7Q7Z402 723 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 VPS52Q8N1B4 723 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 MICALL1Q8N3F8 863 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 BCL7CQ8WUZ0 217 aaPredicted RBP15.18■□□□□ 0.02
HDLBP-240ENST00000484412 HPS3Q969F9 1004 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 HERC2P3Q9BVR0 1158 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 VN1R3Q9BXE9 311 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 EXOC1Q9NV70 894 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 FNIP2Q9P278 1114 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 PCDHA5Q9Y5H7 936 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 CHD7Q9P2D1 2997 aa15.18■□□□□ 0.02
HDLBP-240ENST00000484412 TRANK1O15050 2925 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 ANO9A1A5B4 782 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 ZNF233A6NK53 670 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 PIRO00625 290 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 TRAPPC3O43617 180 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 SMC2O95347 1197 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 CXCL14O95715 111 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 PBX3P40426 434 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 PPP1R2P41236 205 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 MATR3P43243 847 aaKnown RBP eCLIP15.17■□□□□ 0.02
HDLBP-240ENST00000484412 ACOT2P49753 483 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 PPP2R3AQ06190 1150 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 SOX4Q06945 474 aaPredicted RBP15.17■□□□□ 0.02
HDLBP-240ENST00000484412 DUSP6Q16828 381 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 TCEAL5Q5H9L2 206 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 ZNF658Q5TYW1 1059 aaPredicted RBP15.17■□□□□ 0.02
HDLBP-240ENST00000484412 FUT10Q6P4F1 479 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 PDXDC1Q6P996 788 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 HS2ST1Q7LGA3 356 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 BRSK2Q8IWQ3 736 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 HDAC7Q8WUI4 952 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 MFSD14AQ96MC6 490 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 TCF25Q9BQ70 676 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 PAAF1Q9BRP4 392 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 CBWD1Q9BRT8 395 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 GPR62Q9BZJ7 368 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.17■□□□□ 0.02
HDLBP-240ENST00000484412 AGPAT3Q9NRZ7 376 aa15.17■□□□□ 0.02
HDLBP-240ENST00000484412 TISP43B9A030 160 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 PRPF40AO75400 957 aaKnown RBP15.16■□□□□ 0.02
HDLBP-240ENST00000484412 PRR29P0C7W0 189 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 CXCL8P10145 99 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 FGFR3P22607 806 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 AARSP49588 968 aaKnown RBP eCLIP15.16■□□□□ 0.02
HDLBP-240ENST00000484412 CLCNKBP51801 687 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 CLDN10P78369 228 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 HYAL1Q12794 435 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 MRPL58Q14197 206 aaKnown RBP15.16■□□□□ 0.02
HDLBP-240ENST00000484412 SEZ6Q53EL9 994 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 ZBTB41Q5SVQ8 909 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 CENPPQ6IPU0 288 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 ARMCX5Q6P1M9 558 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 RTL10Q7L3V2 364 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 PPFIBP1Q86W92 1011 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 XXYLT1Q8NBI6 393 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 MICAL1Q8TDZ2 1067 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 HLA-CQ95604 372 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 RHOBTB2Q9BYZ6 727 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 IKZF4Q9H2S9 585 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 HSPBP1Q9NZL4 362 aa15.16■□□□□ 0.02
HDLBP-240ENST00000484412 COL4A4P53420 1690 aaPredicted RBP15.16■□□□□ 0.02
HDLBP-240ENST00000484412 SYN3O14994 580 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms