RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 ELOA3Q8NG57 546 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 SPPL3Q8TCT6 385 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 MICAL1Q8TDZ2 1067 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 TNFRSF25Q93038 417 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 ZNF558Q96NG5 402 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 NACC1Q96RE7 527 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 UIMC1Q96RL1 719 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 HSD17B14Q9BPX1 270 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 TUFT1Q9NNX1 390 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 TLR9Q9NR96 1032 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 SPG21Q9NZD8 308 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 ZFATQ9P243 1243 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 KCNG1Q9UIX4 513 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 SPTBN5Q9NRC6 3674 aaKnown RBP6.85□□□□□ -1.31
PTCD3-215ENST00000484203 MYH6P13533 1939 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 PHLPP2Q6ZVD8 1323 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 CNTNAP2Q9UHC6 1331 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 TANC1Q9C0D5 1861 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 A0A087WZ62 844 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 ADARB2-AS1A8MUL3 147 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 GRM6O15303 877 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 MGEA5O60502 916 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 JAK2O60674 1132 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 FGF18O76093 207 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 ERLIN2O94905 339 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 SLITRK3O94933 977 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 STBD1O95210 358 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 ITGB1P05556 798 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 MZF1P28698 734 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-215ENST00000484203 ADH7P40394 386 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 KCNQ1P51787 676 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 SPIRE1Q08AE8 756 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 KCNA1Q09470 495 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 LAMTOR4Q0VGL1 99 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 EMC2Q15006 297 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 C8orf34Q49A92 452 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 PAN2Q504Q3 1202 aaKnown RBP6.84□□□□□ -1.31
PTCD3-215ENST00000484203 EP400NLQ6ZTU2 488 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 APBB1IPQ7Z5R6 666 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-215ENST00000484203 SPRED2Q7Z698 418 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 NOSTRINQ8IVI9 506 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 GJD3Q8N144 294 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 COLGALT1Q8NBJ5 622 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 TMEM87AQ8NBN3 555 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 URGCPQ8TCY9 931 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 POF1BQ8WVV4 589 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 PRPF31Q8WWY3 499 aaKnown RBP6.84□□□□□ -1.31
PTCD3-215ENST00000484203 MRPS27Q92552 414 aaKnown RBP6.84□□□□□ -1.31
PTCD3-215ENST00000484203 GJA10Q969M2 543 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 BTBD6Q96KE9 485 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 NLRP4Q96MN2 994 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 MTMR9Q96QG7 549 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 CEP89Q96ST8 783 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 EIF2AK1Q9BQI3 630 aaKnown RBP6.84□□□□□ -1.31
PTCD3-215ENST00000484203 FDXACB1Q9BRP7 624 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-215ENST00000484203 POLR3CQ9BUI4 534 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-215ENST00000484203 NFKBIZQ9BYH8 718 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 TLE6Q9H808 572 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 ALG13Q9NP73 1137 aaKnown RBP6.84□□□□□ -1.31
PTCD3-215ENST00000484203 TYW1Q9NV66 732 aaKnown RBP6.84□□□□□ -1.31
PTCD3-215ENST00000484203 CLDND1Q9NY35 253 aa6.84□□□□□ -1.31
PTCD3-215ENST00000484203 PIN4Q9Y237 131 aaKnown RBP6.84□□□□□ -1.31
PTCD3-215ENST00000484203 TET1Q8NFU7 2136 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 MUC3AQ02505 3323 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 XIRP2A4UGR9 3374 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 PDGFAP04085 211 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 RPLP1P05386 114 aaKnown RBP6.83□□□□□ -1.32
PTCD3-215ENST00000484203 OR52Z1P0C646 297 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 SRGAP2CP0DJJ0 459 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 FGFR1P11362 822 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 HOXB8P17481 243 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-215ENST00000484203 MCM7P33993 719 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 IRS1P35568 1242 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 TXKP42681 527 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 NDUFV1P49821 464 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 CYP4A11Q02928 519 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 RNASELQ05823 741 aaKnown RBP6.83□□□□□ -1.32
PTCD3-215ENST00000484203 HYAL1Q12794 435 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 ADAM15Q13444 863 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 SMAD4Q13485 552 aaKnown RBP6.83□□□□□ -1.32
PTCD3-215ENST00000484203 PDIA5Q14554 519 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 PPP2R5AQ15172 486 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 RILPL1Q5EBL4 403 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 NOMO2Q5JPE7 1267 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 FAM102BQ5T8I3 360 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 PLA2G4FQ68DD2 849 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 NOTUMQ6P988 496 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 ELMSAN1Q6PJG2 1045 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 KCNT2Q6UVM3 1135 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 CHSY3Q70JA7 882 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 FERMT3Q86UX7 667 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 CCDC83Q8IWF9 413 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 ADHFE1Q8IWW8 467 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 FAM178BQ8IXR5 827 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 RNF149Q8NC42 400 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 RNF169Q8NCN4 708 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 TMEM169Q96HH4 297 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 DYDC2Q96IM9 177 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 CASD1Q96PB1 797 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 PPP1R16BQ96T49 567 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms