RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 ZHX3Q9H4I2 956 aa21.04■□□□□ 0.96
NDUFA3-213ENST00000484103 PODXLO00592 558 aa21.03■□□□□ 0.96
NDUFA3-213ENST00000484103 ELAVL2Q12926 359 aaKnown RBP21.03■□□□□ 0.96
NDUFA3-213ENST00000484103 UPP1Q16831 310 aa21.03■□□□□ 0.96
NDUFA3-213ENST00000484103 DCLRE1AQ6PJP8 1040 aa21.03■□□□□ 0.96
NDUFA3-213ENST00000484103 RSPO2Q6UXX9 243 aaPredicted RBP21.03■□□□□ 0.96
NDUFA3-213ENST00000484103 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.03■□□□□ 0.96
NDUFA3-213ENST00000484103 SNX27Q96L92 541 aa21.03■□□□□ 0.96
NDUFA3-213ENST00000484103 PTPRHQ9HD43 1115 aa21.03■□□□□ 0.96
NDUFA3-213ENST00000484103 FOXD4L1Q9NU39 408 aa21.03■□□□□ 0.96
NDUFA3-213ENST00000484103 ZDHHC7Q9NXF8 308 aa21.03■□□□□ 0.96
NDUFA3-213ENST00000484103 FBXW11Q9UKB1 542 aa21.03■□□□□ 0.96
NDUFA3-213ENST00000484103 RBM19Q9Y4C8 960 aaKnown RBP21.03■□□□□ 0.96
NDUFA3-213ENST00000484103 CDY1Q9Y6F8 540 aa21.03■□□□□ 0.96
NDUFA3-213ENST00000484103 TRIP11Q15643 1979 aa21.03■□□□□ 0.96
NDUFA3-213ENST00000484103 VWA8A3KMH1 1905 aa21.02■□□□□ 0.96
NDUFA3-213ENST00000484103 STK25O00506 426 aa21.02■□□□□ 0.96
NDUFA3-213ENST00000484103 MCF2P10911 925 aa21.02■□□□□ 0.96
NDUFA3-213ENST00000484103 UBA7P41226 1012 aa21.02■□□□□ 0.96
NDUFA3-213ENST00000484103 SMTNP53814 917 aa21.02■□□□□ 0.96
NDUFA3-213ENST00000484103 KARSQ15046 597 aaKnown RBP21.02■□□□□ 0.96
NDUFA3-213ENST00000484103 TMEM119Q4V9L6 283 aa21.02■□□□□ 0.96
NDUFA3-213ENST00000484103 HYIQ5T013 277 aa21.02■□□□□ 0.96
NDUFA3-213ENST00000484103 CD300LGQ6UXG3 332 aa21.02■□□□□ 0.96
NDUFA3-213ENST00000484103 GPBP1Q86WP2 473 aa21.02■□□□□ 0.96
NDUFA3-213ENST00000484103 SIX5Q8N196 739 aa21.02■□□□□ 0.96
NDUFA3-213ENST00000484103 TMEM161BQ8NDZ6 487 aa21.02■□□□□ 0.96
NDUFA3-213ENST00000484103 LRRC15Q8TF66 581 aa21.02■□□□□ 0.96
NDUFA3-213ENST00000484103 HDAC7Q8WUI4 952 aa21.02■□□□□ 0.96
NDUFA3-213ENST00000484103 CA14Q9ULX7 337 aa21.02■□□□□ 0.96
NDUFA3-213ENST00000484103 KRT18P05783 430 aaKnown RBP21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 MAPTP10636 758 aaKnown RBP21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 RFX1P22670 979 aa21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 FSHRP23945 695 aa21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 MCM6Q14566 821 aa21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 NOLC1Q14978 699 aaKnown RBP eCLIP21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 SF3A1Q15459 793 aaKnown RBP21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 ARSHQ5FYA8 562 aa21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 SPECC1Q5M775 1068 aa21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 AXDND1Q5T1B0 1012 aaPredicted RBP21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 ATOH1Q92858 354 aaPredicted RBP21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 CALML4Q96GE6 196 aa21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 DDX27Q96GQ7 796 aaKnown RBP21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 UROC1Q96N76 676 aa21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 REEP2Q9BRK0 252 aa21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 TIPINQ9BVW5 301 aa21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 HCFC1R1Q9NWW0 138 aa21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 DUSP12Q9UNI6 340 aa21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 NUB1Q9Y5A7 615 aa21.01■□□□□ 0.95
NDUFA3-213ENST00000484103 MYH11P35749 1972 aa21■□□□□ 0.95
NDUFA3-213ENST00000484103 TULP1O00294 542 aaPredicted RBP21■□□□□ 0.95
NDUFA3-213ENST00000484103 ABLIM1O14639 778 aa21■□□□□ 0.95
NDUFA3-213ENST00000484103 MEFVO15553 781 aaPredicted RBP21■□□□□ 0.95
NDUFA3-213ENST00000484103 PLCG1P19174 1290 aa21■□□□□ 0.95
NDUFA3-213ENST00000484103 FGFR3P22607 806 aa21■□□□□ 0.95
NDUFA3-213ENST00000484103 PROZP22891 400 aa21■□□□□ 0.95
NDUFA3-213ENST00000484103 ARL6IP4Q66PJ3 421 aaKnown RBP21■□□□□ 0.95
NDUFA3-213ENST00000484103 C17orf75Q9HAS0 396 aa21■□□□□ 0.95
NDUFA3-213ENST00000484103 SLC38A7Q9NVC3 462 aa21■□□□□ 0.95
NDUFA3-213ENST00000484103 MTRRQ9UBK8 725 aa21■□□□□ 0.95
NDUFA3-213ENST00000484103 TUBGCP4Q9UGJ1 667 aa21■□□□□ 0.95
NDUFA3-213ENST00000484103 MTCL1Q9Y4B5 1905 aaKnown RBP21■□□□□ 0.95
NDUFA3-213ENST00000484103 ZDBF2Q9HCK1 2354 aa21■□□□□ 0.95
NDUFA3-213ENST00000484103 TMEM189-UBE2V1I3L0A0 370 aa20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 K7ENM7 598 aa20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 TRAPPC3O43617 180 aa20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 TOM1L1O75674 476 aa20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 FAM13AO94988 1023 aa20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 CXCL8P10145 99 aa20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 CEBPZQ03701 1054 aaKnown RBP20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 ASTLQ6HA08 431 aaPredicted RBP20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 PDXDC1Q6P996 788 aa20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 ALKAL1Q6UXT8 129 aa20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 CYP26C1Q6V0L0 522 aa20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 GPR65Q8IYL9 337 aa20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 MYCT1Q8N699 235 aa20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 SPIRE2Q8WWL2 714 aa20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 ING5Q8WYH8 240 aa20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 PRRX2Q99811 253 aa20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 HAPLN2Q9GZV7 340 aa20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 IGSF9Q9P2J2 1179 aa20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 EPS15L1Q9UBC2 864 aa20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 NUMBLQ9Y6R0 609 aa20.99■□□□□ 0.95
NDUFA3-213ENST00000484103 CLDN3O15551 220 aa20.98■□□□□ 0.95
NDUFA3-213ENST00000484103 PI15O43692 258 aa20.98■□□□□ 0.95
NDUFA3-213ENST00000484103 LAMP2P13473 410 aa20.98■□□□□ 0.95
NDUFA3-213ENST00000484103 MCM4P33991 863 aa20.98■□□□□ 0.95
NDUFA3-213ENST00000484103 TNFSF9P41273 254 aa20.98■□□□□ 0.95
NDUFA3-213ENST00000484103 LIG4P49917 911 aa20.98■□□□□ 0.95
NDUFA3-213ENST00000484103 VARS2Q5ST30 1063 aaKnown RBP20.98■□□□□ 0.95
NDUFA3-213ENST00000484103 CWF19L1Q69YN2 538 aaKnown RBP20.98■□□□□ 0.95
NDUFA3-213ENST00000484103 FAM173BQ6P4H8 233 aa20.98■□□□□ 0.95
NDUFA3-213ENST00000484103 HAUS6Q7Z4H7 955 aa20.98■□□□□ 0.95
NDUFA3-213ENST00000484103 SLC44A3Q8N4M1 653 aa20.98■□□□□ 0.95
NDUFA3-213ENST00000484103 ITFG1Q8TB96 612 aa20.98■□□□□ 0.95
NDUFA3-213ENST00000484103 FAM212AQ96EL1 285 aa20.98■□□□□ 0.95
NDUFA3-213ENST00000484103 CNTN3Q9P232 1028 aa20.98■□□□□ 0.95
NDUFA3-213ENST00000484103 LARSQ9P2J5 1176 aaKnown RBP20.98■□□□□ 0.95
NDUFA3-213ENST00000484103 CLIC4Q9Y696 253 aa20.98■□□□□ 0.95
NDUFA3-213ENST00000484103 XYLBO75191 536 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms