RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 SYCP1Q15431 976 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 AAK1Q2M2I8 961 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 PPP2R2DQ66LE6 453 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 NEK11Q8NG66 645 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 CACTINQ8WUQ7 758 aaKnown RBP15.13■□□□□ 0.01
SMAD9-204ENST00000483941 CCDC127Q96BQ5 260 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 TRPV6Q9H1D0 765 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 NUCKS1Q9H1E3 243 aaKnown RBP15.13■□□□□ 0.01
SMAD9-204ENST00000483941 ASB7Q9H672 318 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 CDHR5Q9HBB8 845 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 TMEM8AQ9HCN3 771 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 TOPORSQ9NS56 1045 aaPredicted RBP15.13■□□□□ 0.01
SMAD9-204ENST00000483941 ST3GAL5Q9UNP4 418 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 SIP14410 1827 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 A0A1W2PQJ5 194 aa15.12■□□□□ 0.01
SMAD9-204ENST00000483941 CSDE1O75534 798 aaKnown RBP15.12■□□□□ 0.01
SMAD9-204ENST00000483941 CD4P01730 458 aa15.12■□□□□ 0.01
SMAD9-204ENST00000483941 CTSHP09668 335 aa15.12■□□□□ 0.01
SMAD9-204ENST00000483941 STAG3L1P0CL83 205 aa15.12■□□□□ 0.01
SMAD9-204ENST00000483941 DLATP10515 647 aaKnown RBP15.12■□□□□ 0.01
SMAD9-204ENST00000483941 SELPP16109 830 aa15.12■□□□□ 0.01
SMAD9-204ENST00000483941 HOXA11P31270 313 aaPredicted RBP15.12■□□□□ 0.01
SMAD9-204ENST00000483941 MXI1P50539 228 aa15.12■□□□□ 0.01
SMAD9-204ENST00000483941 RAB27AP51159 221 aa15.12■□□□□ 0.01
SMAD9-204ENST00000483941 MYL7Q01449 175 aa15.12■□□□□ 0.01
SMAD9-204ENST00000483941 TRIM71Q2Q1W2 868 aaKnown RBP15.12■□□□□ 0.01
SMAD9-204ENST00000483941 FBXO47Q5MNV8 452 aa15.12■□□□□ 0.01
SMAD9-204ENST00000483941 SMYD5Q6GMV2 418 aa15.12■□□□□ 0.01
SMAD9-204ENST00000483941 FAM228AQ86W67 206 aa15.12■□□□□ 0.01
SMAD9-204ENST00000483941 WDR49Q8IV35 697 aa15.12■□□□□ 0.01
SMAD9-204ENST00000483941 THNSL1Q8IYQ7 743 aa15.12■□□□□ 0.01
SMAD9-204ENST00000483941 CPB2Q96IY4 423 aa15.12■□□□□ 0.01
SMAD9-204ENST00000483941 FTHL17Q9BXU8 183 aa15.12■□□□□ 0.01
SMAD9-204ENST00000483941 MMRN2Q9H8L6 949 aa15.12■□□□□ 0.01
SMAD9-204ENST00000483941 PLCB1Q9NQ66 1216 aa15.12■□□□□ 0.01
SMAD9-204ENST00000483941 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
SMAD9-204ENST00000483941 LUC7L2Q9Y383 392 aaKnown RBP15.12■□□□□ 0.01
SMAD9-204ENST00000483941 NOC2LQ9Y3T9 749 aaKnown RBP15.12■□□□□ 0.01
SMAD9-204ENST00000483941 ARIH1Q9Y4X5 557 aaPredicted RBP15.12■□□□□ 0.01
SMAD9-204ENST00000483941 PRRC2BQ5JSZ5 2229 aaKnown RBP15.12■□□□□ 0.01
SMAD9-204ENST00000483941 TTLL13PA6NNM8 815 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 AKR1B15C9JRZ8 316 aaPredicted RBP15.11■□□□□ 0.01
SMAD9-204ENST00000483941 ZC3H11AO75152 810 aaKnown RBP eCLIP15.11■□□□□ 0.01
SMAD9-204ENST00000483941 TNNC2P02585 160 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 FGBP02675 491 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 EDN1P05305 212 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 ADRB2P07550 413 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 KCNQ1P51787 676 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 NFX1Q12986 1120 aaKnown RBP15.11■□□□□ 0.01
SMAD9-204ENST00000483941 SKIV2LQ15477 1246 aaKnown RBP15.11■□□□□ 0.01
SMAD9-204ENST00000483941 DUOXA2Q1HG44 320 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 ZNF618Q5T7W0 954 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 EEF1DP3Q658K8 133 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 TWF2Q6IBS0 349 aaKnown RBP15.11■□□□□ 0.01
SMAD9-204ENST00000483941 CRELD2Q6UXH1 353 aaPredicted RBP15.11■□□□□ 0.01
SMAD9-204ENST00000483941 OTOP2Q7RTS6 562 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 CCDC112Q8NEF3 446 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 TMEM40Q8WWA1 233 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 CGRRF1Q99675 332 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 TRAIPQ9BWF2 469 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 HAPLN2Q9GZV7 340 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 HIPK3Q9H422 1215 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 FBXL5Q9UKA1 691 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 USP20Q9Y2K6 914 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 DERAQ9Y315 318 aa15.11■□□□□ 0.01
SMAD9-204ENST00000483941 R3HCC1Q9Y3T6 440 aaKnown RBP15.11■□□□□ 0.01
SMAD9-204ENST00000483941 PIEZO1Q92508 2521 aa15.1■□□□□ 0.01
SMAD9-204ENST00000483941 COL4A4P53420 1690 aaPredicted RBP15.1■□□□□ 0.01
SMAD9-204ENST00000483941 LRRIQ3A6PVS8 624 aaPredicted RBP15.1■□□□□ 0.01
SMAD9-204ENST00000483941 TULP1O00294 542 aaPredicted RBP15.1■□□□□ 0.01
SMAD9-204ENST00000483941 XPOTO43592 962 aaKnown RBP15.1■□□□□ 0.01
SMAD9-204ENST00000483941 FAM189A1O60320 539 aa15.1■□□□□ 0.01
SMAD9-204ENST00000483941 NPTXRO95502 500 aa15.1■□□□□ 0.01
SMAD9-204ENST00000483941 FGFR4P22455 802 aa15.1■□□□□ 0.01
SMAD9-204ENST00000483941 RABGGTBP53611 331 aa15.1■□□□□ 0.01
SMAD9-204ENST00000483941 TBX2Q13207 712 aaPredicted RBP15.1■□□□□ 0.01
SMAD9-204ENST00000483941 LRRC8DQ7L1W4 858 aa15.1■□□□□ 0.01
SMAD9-204ENST00000483941 CCDC186Q7Z3E2 898 aa15.1■□□□□ 0.01
SMAD9-204ENST00000483941 CACNA2D4Q7Z3S7 1137 aa15.1■□□□□ 0.01
SMAD9-204ENST00000483941 FBXL13Q8NEE6 735 aa15.1■□□□□ 0.01
SMAD9-204ENST00000483941 DHX38Q92620 1227 aaKnown RBP15.1■□□□□ 0.01
SMAD9-204ENST00000483941 ANKRD36BP1Q96IX9 119 aa15.1■□□□□ 0.01
SMAD9-204ENST00000483941 LRFN3Q9BTN0 628 aa15.1■□□□□ 0.01
SMAD9-204ENST00000483941 ERVK-5Q9HDB9 667 aa15.1■□□□□ 0.01
SMAD9-204ENST00000483941 UBN1Q9NPG3 1134 aa15.1■□□□□ 0.01
SMAD9-204ENST00000483941 ZNHIT6Q9NWK9 470 aaKnown RBP15.1■□□□□ 0.01
SMAD9-204ENST00000483941 GCNT4Q9P109 453 aa15.1■□□□□ 0.01
SMAD9-204ENST00000483941 PADI3Q9ULW8 664 aa15.1■□□□□ 0.01
SMAD9-204ENST00000483941 CAPN11Q9UMQ6 739 aa15.1■□□□□ 0.01
SMAD9-204ENST00000483941 SIK3Q9Y2K2 1263 aa15.1■□□□□ 0.01
SMAD9-204ENST00000483941 UMODL1Q5DID0 1318 aa15.1■□□□□ 0.01
SMAD9-204ENST00000483941 PHACTR2O75167 634 aa15.09■□□□□ 0.01
SMAD9-204ENST00000483941 TRIM49P0CI25 452 aa15.09■□□□□ 0.01
SMAD9-204ENST00000483941 TRIM49CP0CI26 452 aa15.09■□□□□ 0.01
SMAD9-204ENST00000483941 GCLMP48507 274 aa15.09■□□□□ 0.01
SMAD9-204ENST00000483941 ZBED6P86452 979 aa15.09■□□□□ 0.01
SMAD9-204ENST00000483941 WDR44Q5JSH3 913 aa15.09■□□□□ 0.01
SMAD9-204ENST00000483941 EHBP1Q8NDI1 1231 aa15.09■□□□□ 0.01
SMAD9-204ENST00000483941 APBB2Q92870 758 aa15.09■□□□□ 0.01
SMAD9-204ENST00000483941 WNT8BQ93098 351 aa15.09■□□□□ 0.01
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