RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 STRN3Q13033 797 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 MTF1Q14872 753 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 PLCB4Q15147 1175 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 SNRNP35Q16560 246 aaKnown RBP5.87□□□□□ -1.47
COL17A1-206ENST00000483876 HSDL1Q3SXM5 330 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 MTERF2Q49AM1 385 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 DUSP28Q4G0W2 176 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 ARHGAP29Q52LW3 1261 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 WDR78Q5VTH9 848 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 IRF2BP2Q7Z5L9 587 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 RNF180Q86T96 592 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 DPP9Q86TI2 863 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 KSR1Q8IVT5 923 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 ZNF710Q8N1W2 664 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 LMO3Q8TAP4 145 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 DEPTORQ8TB45 409 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 BSNDQ8WZ55 320 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 GLG1Q92896 1179 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 ASIC4Q96FT7 647 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 MAML3Q96JK9 1138 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 HINFPQ9BQA5 517 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 CBWD1Q9BRT8 395 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 TINF2Q9BSI4 451 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 LSM14BQ9BX40 385 aaKnown RBP5.87□□□□□ -1.47
COL17A1-206ENST00000483876 KATNBL1Q9H079 304 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 POLR3FQ9H1D9 316 aaPredicted RBP5.87□□□□□ -1.47
COL17A1-206ENST00000483876 C2orf40Q9H1Z8 148 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 SIX2Q9NPC8 291 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 STARD7Q9NQZ5 370 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.87□□□□□ -1.47
COL17A1-206ENST00000483876 ARHGAP20Q9P2F6 1191 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 INTUQ9ULD6 942 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 Q9Y3F1 56 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 ATP8B3O60423 1300 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 COL1A2P08123 1366 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 LCTP09848 1927 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 MROH7Q68CQ1 1323 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 A0A0B4J269 797 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 ZNF233A6NK53 670 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 BTNL10A8MVZ5 291 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 ZBTB42B2RXF5 422 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 ANKRD63C9JTQ0 380 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 RIOK3O14730 519 aaKnown RBP5.86□□□□□ -1.47
COL17A1-206ENST00000483876 EXTL3O43909 919 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 AKR1B10O60218 316 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 LMNAP02545 664 aaKnown RBP5.86□□□□□ -1.47
COL17A1-206ENST00000483876 PRLRP16471 622 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 FERP16591 822 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 SDHBP21912 280 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 EIF4A3P38919 411 aaKnown RBP5.86□□□□□ -1.47
COL17A1-206ENST00000483876 MAGEA1P43355 309 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 CYP2J2P51589 502 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 VAV2P52735 878 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 AP3M2P53677 418 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 ATXN1P54253 815 aaKnown RBP5.86□□□□□ -1.47
COL17A1-206ENST00000483876 SP4Q02446 784 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 ARHGAP1Q07960 439 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 KLHL30Q0D2K2 578 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 ACVR2BQ13705 512 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 TFDP1Q14186 410 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 SURF1Q15526 300 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 SMAD2Q15796 467 aaKnown RBP5.86□□□□□ -1.47
COL17A1-206ENST00000483876 SLC18A3Q16572 532 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 FAM187BQ17R55 369 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 EPC2Q52LR7 807 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 DCAF17Q5H9S7 520 aaPredicted RBP5.86□□□□□ -1.47
COL17A1-206ENST00000483876 TCERG1LQ5VWI1 586 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 OLFML2BQ68BL8 750 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 CDCA2Q69YH5 1023 aaPredicted RBP5.86□□□□□ -1.47
COL17A1-206ENST00000483876 KRT39Q6A163 491 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 SYT10Q6XYQ8 523 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 ENOSF1Q7L5Y1 443 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 EEPD1Q7L9B9 569 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 SPRED2Q7Z698 418 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 VPS36Q86VN1 386 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 IFNLR1Q8IU57 520 aaPredicted RBP5.86□□□□□ -1.47
COL17A1-206ENST00000483876 GPD1LQ8N335 351 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 CCDC155Q8N6L0 562 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 PARD3BQ8TEW8 1205 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 PRPF31Q8WWY3 499 aaKnown RBP5.86□□□□□ -1.47
COL17A1-206ENST00000483876 PSPC1Q8WXF1 523 aaKnown RBP5.86□□□□□ -1.47
COL17A1-206ENST00000483876 POMGNT1Q8WZA1 660 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 ZNF592Q92610 1267 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 JAKMIP2Q96AA8 810 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 TMEM143Q96AN5 459 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 CALR3Q96L12 384 aaKnown RBP5.86□□□□□ -1.47
COL17A1-206ENST00000483876 SPAG5Q96R06 1193 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 SH2D3AQ9BRG2 576 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 CRACR2AQ9BSW2 395 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 DESI2Q9BSY9 194 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 FZD8Q9H461 694 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 TMEM8AQ9HCN3 771 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 XPNPEP3Q9NQH7 507 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 PDGFCQ9NRA1 345 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 APEX2Q9UBZ4 518 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 DNAI1Q9UI46 699 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 REXO2Q9Y3B8 237 aaKnown RBP5.86□□□□□ -1.47
COL17A1-206ENST00000483876 TELO2Q9Y4R8 837 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 PCDHA13Q9Y5I0 950 aa5.86□□□□□ -1.47
COL17A1-206ENST00000483876 MYH9P35579 1960 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms