RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 MTA2O94776 668 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 HOXC6P09630 235 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 HARSP12081 509 aaKnown RBP14.23□□□□□ -0.13
CPNE1-225ENST00000483495 MCM3P25205 808 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 IGBP1P78318 339 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 GPC5P78333 572 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 CUL2Q13617 745 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 BEND6Q5SZJ8 279 aaPredicted RBP14.23□□□□□ -0.13
CPNE1-225ENST00000483495 TAF3Q5VWG9 929 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 CHADLQ6NUI6 762 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 MTHFD1LQ6UB35 978 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 PEX26Q7Z412 305 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 DAAM2Q86T65 1068 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 ZNF677Q86XU0 584 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 OR6J1Q8NGC5 347 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 TAF4BQ92750 862 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 ELMO3Q96BJ8 720 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 HES6Q96HZ4 224 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 MS4A14Q96JA4 679 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 ARID3AQ99856 593 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 INO80BQ9C086 356 aaPredicted RBP14.23□□□□□ -0.13
CPNE1-225ENST00000483495 GOLPH3Q9H4A6 298 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 CPA4Q9UI42 421 aa14.23□□□□□ -0.13
CPNE1-225ENST00000483495 ZHX1Q9UKY1 873 aaPredicted RBP14.23□□□□□ -0.13
CPNE1-225ENST00000483495 B4GALT5O43286 388 aa14.22□□□□□ -0.13
CPNE1-225ENST00000483495 SEC31AO94979 1220 aaKnown RBP14.22□□□□□ -0.13
CPNE1-225ENST00000483495 TBC1D8O95759 1140 aa14.22□□□□□ -0.13
CPNE1-225ENST00000483495 CLTAP09496 248 aa14.22□□□□□ -0.13
CPNE1-225ENST00000483495 IQCF3P0C7M6 154 aa14.22□□□□□ -0.13
CPNE1-225ENST00000483495 TBXAS1P24557 533 aaPredicted RBP14.22□□□□□ -0.13
CPNE1-225ENST00000483495 TMOD1P28289 359 aa14.22□□□□□ -0.13
CPNE1-225ENST00000483495 BPIFB4P59827 614 aa14.22□□□□□ -0.13
CPNE1-225ENST00000483495 POU5F1Q01860 360 aaKnown RBP14.22□□□□□ -0.13
CPNE1-225ENST00000483495 MAP2K5Q13163 448 aa14.22□□□□□ -0.13
CPNE1-225ENST00000483495 NCOA4Q13772 614 aa14.22□□□□□ -0.13
CPNE1-225ENST00000483495 AMHR2Q16671 573 aa14.22□□□□□ -0.13
CPNE1-225ENST00000483495 DGKDQ16760 1214 aa14.22□□□□□ -0.13
CPNE1-225ENST00000483495 LONRF2Q1L5Z9 754 aa14.22□□□□□ -0.13
CPNE1-225ENST00000483495 UBE2Q2Q8WVN8 375 aa14.22□□□□□ -0.13
CPNE1-225ENST00000483495 SMARCAL1Q9NZC9 954 aa14.22□□□□□ -0.13
CPNE1-225ENST00000483495 EHD2Q9NZN4 543 aa14.22□□□□□ -0.13
CPNE1-225ENST00000483495 COG5Q9UP83 839 aa14.22□□□□□ -0.13
CPNE1-225ENST00000483495 PCDHB2Q9Y5E7 798 aa14.22□□□□□ -0.13
CPNE1-225ENST00000483495 ADCY6O43306 1168 aa14.21□□□□□ -0.13
CPNE1-225ENST00000483495 B4GALT4O60513 344 aa14.21□□□□□ -0.13
CPNE1-225ENST00000483495 ASS1P00966 412 aaKnown RBP14.21□□□□□ -0.13
CPNE1-225ENST00000483495 KRT5P13647 590 aa14.21□□□□□ -0.13
CPNE1-225ENST00000483495 ZNF157P51786 506 aaPredicted RBP14.21□□□□□ -0.13
CPNE1-225ENST00000483495 NOP14P78316 857 aaKnown RBP14.21□□□□□ -0.13
CPNE1-225ENST00000483495 DUOXA2Q1HG44 320 aa14.21□□□□□ -0.13
CPNE1-225ENST00000483495 ZNF568Q3ZCX4 644 aa14.21□□□□□ -0.13
CPNE1-225ENST00000483495 GLIPR1L2Q4G1C9 344 aa14.21□□□□□ -0.13
CPNE1-225ENST00000483495 EEF1DP3Q658K8 133 aa14.21□□□□□ -0.13
CPNE1-225ENST00000483495 SPOPLQ6IQ16 392 aa14.21□□□□□ -0.13
CPNE1-225ENST00000483495 C11orf63Q6NUN7 778 aa14.21□□□□□ -0.13
CPNE1-225ENST00000483495 ACTRT1Q8TDG2 376 aa14.21□□□□□ -0.13
CPNE1-225ENST00000483495 USP6NLQ92738 828 aa14.21□□□□□ -0.13
CPNE1-225ENST00000483495 CDT1Q9H211 546 aa14.21□□□□□ -0.13
CPNE1-225ENST00000483495 TMEM59LQ9UK28 342 aa14.21□□□□□ -0.13
CPNE1-225ENST00000483495 AMFRQ9UKV5 643 aa14.21□□□□□ -0.13
CPNE1-225ENST00000483495 ZSWIM8A7E2V4 1837 aa14.21□□□□□ -0.13
CPNE1-225ENST00000483495 A6NJR5 290 aa14.21□□□□□ -0.14
CPNE1-225ENST00000483495 KCNK3O14649 394 aa14.21□□□□□ -0.14
CPNE1-225ENST00000483495 CYP1A2P05177 515 aa14.21□□□□□ -0.14
CPNE1-225ENST00000483495 TNFAIP2Q03169 654 aa14.21□□□□□ -0.14
CPNE1-225ENST00000483495 PPFIA1Q13136 1202 aa14.21□□□□□ -0.14
CPNE1-225ENST00000483495 GRIK4Q16099 956 aa14.21□□□□□ -0.14
CPNE1-225ENST00000483495 CLEC16AQ2KHT3 1053 aa14.21□□□□□ -0.14
CPNE1-225ENST00000483495 GLE1Q53GS7 698 aaKnown RBP14.21□□□□□ -0.14
CPNE1-225ENST00000483495 MARCH8Q5T0T0 291 aa14.21□□□□□ -0.14
CPNE1-225ENST00000483495 ACAD10Q6JQN1 1059 aa14.21□□□□□ -0.14
CPNE1-225ENST00000483495 CCDC70Q6NSX1 233 aa14.21□□□□□ -0.14
CPNE1-225ENST00000483495 C17orf99Q6UX52 265 aa14.21□□□□□ -0.14
CPNE1-225ENST00000483495 RASGEF1CQ8N431 466 aa14.21□□□□□ -0.14
CPNE1-225ENST00000483495 UBR7Q8N806 425 aa14.21□□□□□ -0.14
CPNE1-225ENST00000483495 ZNF668Q96K58 619 aaPredicted RBP14.21□□□□□ -0.14
CPNE1-225ENST00000483495 FUT8Q9BYC5 575 aa14.21□□□□□ -0.14
CPNE1-225ENST00000483495 RBM12Q9NTZ6 932 aaKnown RBP14.21□□□□□ -0.14
CPNE1-225ENST00000483495 GTF3C4Q9UKN8 822 aa14.21□□□□□ -0.14
CPNE1-225ENST00000483495 GNEQ9Y223 722 aaKnown RBP14.21□□□□□ -0.14
CPNE1-225ENST00000483495 NUB1Q9Y5A7 615 aa14.21□□□□□ -0.14
CPNE1-225ENST00000483495 A0A087WZ62 844 aa14.2□□□□□ -0.14
CPNE1-225ENST00000483495 PHACTR2O75167 634 aa14.2□□□□□ -0.14
CPNE1-225ENST00000483495 UNGP13051 313 aaPredicted RBP14.2□□□□□ -0.14
CPNE1-225ENST00000483495 TAF1CQ15572 869 aaPredicted RBP14.2□□□□□ -0.14
CPNE1-225ENST00000483495 SAPCD2Q86UD0 394 aa14.2□□□□□ -0.14
CPNE1-225ENST00000483495 USP38Q8NB14 1042 aa14.2□□□□□ -0.14
CPNE1-225ENST00000483495 FDXACB1Q9BRP7 624 aaPredicted RBP14.2□□□□□ -0.14
CPNE1-225ENST00000483495 SELENOOQ9BVL4 669 aa14.2□□□□□ -0.14
CPNE1-225ENST00000483495 MTMR12Q9C0I1 747 aa14.2□□□□□ -0.14
CPNE1-225ENST00000483495 L1RE1Q9UN81 338 aa14.2□□□□□ -0.14
CPNE1-225ENST00000483495 AKT3Q9Y243 479 aa14.2□□□□□ -0.14
CPNE1-225ENST00000483495 TRPM7Q96QT4 1865 aa14.2□□□□□ -0.14
CPNE1-225ENST00000483495 MAP2K7O14733 419 aa14.19□□□□□ -0.14
CPNE1-225ENST00000483495 DDX3YO15523 660 aaKnown RBP14.19□□□□□ -0.14
CPNE1-225ENST00000483495 ZEB2O60315 1214 aa14.19□□□□□ -0.14
CPNE1-225ENST00000483495 SASH3O75995 380 aa14.19□□□□□ -0.14
CPNE1-225ENST00000483495 IL18RAPO95256 599 aa14.19□□□□□ -0.14
CPNE1-225ENST00000483495 CST3P01034 146 aaPredicted RBP14.19□□□□□ -0.14
CPNE1-225ENST00000483495 IGHA2P01877 340 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms