RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 ZRSR2Q15696 482 aaKnown RBP12.57□□□□□ -0.4
VTI1A-205ENST00000483122 SLC1A5Q15758 541 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 PDK4Q16654 411 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 RC3H1Q5TC82 1133 aaKnown RBP12.57□□□□□ -0.4
VTI1A-205ENST00000483122 ZNF746Q6NUN9 644 aaPredicted RBP12.57□□□□□ -0.4
VTI1A-205ENST00000483122 POTEGQ6S5H5 508 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 RFX8Q6ZV50 586 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 DEFB132Q7Z7B7 95 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 KIAA0825Q8IV33 1275 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 ARHGAP18Q8N392 663 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 CFAP61Q8NHU2 1237 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 ATG4AQ8WYN0 398 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 SNF8Q96H20 258 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 BTBD10Q9BSF8 475 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 MMADHCQ9H3L0 296 aaPredicted RBP12.57□□□□□ -0.4
VTI1A-205ENST00000483122 SAR1AQ9NR31 198 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 CHST7Q9NS84 486 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 STX18Q9P2W9 335 aaKnown RBP12.57□□□□□ -0.4
VTI1A-205ENST00000483122 SLC4A7Q9Y6M7 1214 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 ROBO3Q96MS0 1386 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 TAF1P21675 1872 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 C2CD2LO14523 706 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 PENKP01210 267 aaPredicted RBP12.56□□□□□ -0.4
VTI1A-205ENST00000483122 CCNFP41002 786 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 CRKLP46109 303 aaKnown RBP12.56□□□□□ -0.4
VTI1A-205ENST00000483122 KCNQ4P56696 695 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 PSMC6P62333 389 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 LSAMPQ13449 338 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 RINLQ6ZS11 566 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 RGS9BPQ6ZS82 235 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 TRABD2AQ86V40 505 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 LCA5Q86VQ0 697 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 C4orf33Q8N1A6 199 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 PRR11Q96HE9 360 aaPredicted RBP12.56□□□□□ -0.4
VTI1A-205ENST00000483122 AGPAT1Q99943 283 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 ASCC2Q9H1I8 757 aaPredicted RBP12.56□□□□□ -0.4
VTI1A-205ENST00000483122 SYNCQ9H7C4 482 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 DCTN4Q9UJW0 460 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 FRMPD4Q14CM0 1322 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 FRMPD2Q68DX3 1309 aaPredicted RBP12.56□□□□□ -0.4
VTI1A-205ENST00000483122 CFAP69A5D8W1 941 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 USP17L5A8MUK1 530 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 RSPH10B2B2RC85 870 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 FOXN3O00409 490 aaPredicted RBP12.56□□□□□ -0.4
VTI1A-205ENST00000483122 RSPH10BP0C881 870 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 GCAP28676 217 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 TPP2P29144 1249 aaPredicted RBP12.56□□□□□ -0.4
VTI1A-205ENST00000483122 RPA3P35244 121 aaPredicted RBP12.56□□□□□ -0.4
VTI1A-205ENST00000483122 MAGEA8P43361 318 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 USP46P62068 366 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 GSTA3Q16772 222 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 CBWD6Q4V339 395 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 LIN52Q52LA3 116 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 SGO2Q562F6 1265 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 CBWD3Q5JTY5 395 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 CBWD5Q5RIA9 395 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 ZNF513Q8N8E2 541 aaPredicted RBP12.56□□□□□ -0.4
VTI1A-205ENST00000483122 RFWD2Q8NHY2 731 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 PTCD3Q96EY7 689 aaKnown RBP12.56□□□□□ -0.4
VTI1A-205ENST00000483122 DYDC2Q96IM9 177 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 NR1H4Q96RI1 486 aaPredicted RBP12.56□□□□□ -0.4
VTI1A-205ENST00000483122 HAPLN3Q96S86 360 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 REEP2Q9BRK0 252 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 WNT8AQ9H1J5 351 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 TYW1Q9NV66 732 aaKnown RBP12.56□□□□□ -0.4
VTI1A-205ENST00000483122 ETNK2Q9NVF9 386 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 DDX43Q9NXZ2 648 aaKnown RBP12.56□□□□□ -0.4
VTI1A-205ENST00000483122 ANAPC5Q9UJX4 755 aa12.56□□□□□ -0.4
VTI1A-205ENST00000483122 UBR3Q6ZT12 1888 aa12.55□□□□□ -0.4
VTI1A-205ENST00000483122 MEIS1O00470 390 aa12.55□□□□□ -0.4
VTI1A-205ENST00000483122 SLC16A3O15427 465 aaKnown RBP12.55□□□□□ -0.4
VTI1A-205ENST00000483122 CCDC22O60826 627 aa12.55□□□□□ -0.4
VTI1A-205ENST00000483122 AMPD1P23109 780 aa12.55□□□□□ -0.4
VTI1A-205ENST00000483122 FMO5P49326 533 aa12.55□□□□□ -0.4
VTI1A-205ENST00000483122 ERFP50548 548 aa12.55□□□□□ -0.4
VTI1A-205ENST00000483122 THOC5Q13769 683 aaKnown RBP12.55□□□□□ -0.4
VTI1A-205ENST00000483122 UBE4AQ14139 1066 aa12.55□□□□□ -0.4
VTI1A-205ENST00000483122 PKN2Q16513 984 aaKnown RBP12.55□□□□□ -0.4
VTI1A-205ENST00000483122 SPDYAQ5MJ70 313 aa12.55□□□□□ -0.4
VTI1A-205ENST00000483122 DPY19L2Q6NUT2 758 aa12.55□□□□□ -0.4
VTI1A-205ENST00000483122 STMN2Q93045 179 aa12.55□□□□□ -0.4
VTI1A-205ENST00000483122 ADAM33Q9BZ11 813 aa12.55□□□□□ -0.4
VTI1A-205ENST00000483122 TRABDQ9H4I3 376 aa12.55□□□□□ -0.4
VTI1A-205ENST00000483122 ZNF212Q9UDV6 495 aa12.55□□□□□ -0.4
VTI1A-205ENST00000483122 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.55□□□□□ -0.4
VTI1A-205ENST00000483122 GYG2O15488 501 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 SPOPO43791 374 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 GPC5P78333 572 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 OVGP1Q12889 678 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 PABPC4Q13310 644 aaKnown RBP eCLIP12.54□□□□□ -0.44e-7■■■□□ 17.1
VTI1A-205ENST00000483122 PPP2R5CQ13362 524 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 STAT4Q14765 748 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 CYP4F22Q6NT55 531 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 INTS5Q6P9B9 1019 aaKnown RBP12.54□□□□□ -0.4
VTI1A-205ENST00000483122 SCYL3Q8IZE3 742 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 CNKSR2Q8WXI2 1034 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 FAM163AQ96GL9 167 aaPredicted RBP12.54□□□□□ -0.4
VTI1A-205ENST00000483122 RUSC1Q9BVN2 902 aa12.54□□□□□ -0.4
VTI1A-205ENST00000483122 SAP30BPQ9UHR5 308 aaKnown RBP12.54□□□□□ -0.4
VTI1A-205ENST00000483122 TMCO1Q9UM00 188 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms