RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 C1RP00736 705 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 CLCNKBP51801 687 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 UPP1Q16831 310 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 TMC5Q6UXY8 1006 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 SFR1Q86XK3 245 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 CEP57Q86XR8 500 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 RNF135Q8IUD6 432 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 MAP4K3Q8IVH8 894 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 PIK3R5Q8WYR1 880 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 HVCN1Q96D96 273 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 FIZ1Q96SL8 496 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 LRRC27Q9C0I9 530 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 ST6GALNAC4Q9H4F1 302 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 PLEKHA5Q9HAU0 1116 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 GOLGA2P5Q9HBQ8 144 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 MAN1C1Q9NR34 630 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 CFAP45Q9UL16 551 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 NR2E1Q9Y466 385 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.15■□□□□ 0.02
VARS-225ENST00000482996 PODXLO00592 558 aa15.14■□□□□ 0.01
VARS-225ENST00000482996 OGTO15294 1046 aa15.14■□□□□ 0.01
VARS-225ENST00000482996 IDEP14735 1019 aa15.14■□□□□ 0.01
VARS-225ENST00000482996 RPL9P32969 192 aaKnown RBP15.14■□□□□ 0.01
VARS-225ENST00000482996 PSMD5Q16401 504 aa15.14■□□□□ 0.01
VARS-225ENST00000482996 SLC10A6Q3KNW5 377 aa15.14■□□□□ 0.01
VARS-225ENST00000482996 SEZ6Q53EL9 994 aa15.14■□□□□ 0.01
VARS-225ENST00000482996 RTP2Q5QGT7 225 aa15.14■□□□□ 0.01
VARS-225ENST00000482996 PRSS55Q6UWB4 352 aaPredicted RBP15.14■□□□□ 0.01
VARS-225ENST00000482996 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.14■□□□□ 0.01
VARS-225ENST00000482996 ZNF720Q7Z2F6 126 aa15.14■□□□□ 0.01
VARS-225ENST00000482996 PALB2Q86YC2 1186 aa15.14■□□□□ 0.01
VARS-225ENST00000482996 HDAC7Q8WUI4 952 aa15.14■□□□□ 0.01
VARS-225ENST00000482996 DNAJC19Q96DA6 116 aa15.14■□□□□ 0.01
VARS-225ENST00000482996 ZMAT2Q96NC0 199 aaKnown RBP15.14■□□□□ 0.01
VARS-225ENST00000482996 MSTO1Q9BUK6 570 aa15.14■□□□□ 0.01
VARS-225ENST00000482996 HAPLN2Q9GZV7 340 aa15.14■□□□□ 0.01
VARS-225ENST00000482996 CUEDC2Q9H467 287 aa15.14■□□□□ 0.01
VARS-225ENST00000482996 PLEKHA4Q9H4M7 779 aa15.14■□□□□ 0.01
VARS-225ENST00000482996 MRPL44Q9H9J2 332 aaKnown RBP15.14■□□□□ 0.01
VARS-225ENST00000482996 RPF1Q9H9Y2 349 aaKnown RBP15.14■□□□□ 0.01
VARS-225ENST00000482996 TRIP11Q15643 1979 aa15.14■□□□□ 0.01
VARS-225ENST00000482996 CITO14578 2027 aa15.14■□□□□ 0.01
VARS-225ENST00000482996 A0A087X0B3 334 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 A0A0B4J269 797 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 WEE2P0C1S8 567 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 CXCL8P10145 99 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 RPL17P18621 184 aaKnown RBP15.13■□□□□ 0.01
VARS-225ENST00000482996 ME1P48163 572 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 PPP2R3AQ06190 1150 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 SOX4Q06945 474 aaPredicted RBP15.13■□□□□ 0.01
VARS-225ENST00000482996 PKP1Q13835 747 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 ZC2HC1CQ53FD0 456 aaPredicted RBP15.13■□□□□ 0.01
VARS-225ENST00000482996 HERC4Q5GLZ8 1057 aaPredicted RBP15.13■□□□□ 0.01
VARS-225ENST00000482996 TMEM31Q5JXX7 168 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 SLFN12LQ6IEE8 588 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 GPR149Q86SP6 731 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 GLYCTKQ8IVS8 523 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 IQUBQ8NA54 791 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 CMASQ8NFW8 434 aaPredicted RBP15.13■□□□□ 0.01
VARS-225ENST00000482996 TNMDQ9H2S6 317 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 POMKQ9H5K3 350 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 TSHZ2Q9NRE2 1034 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 CDH22Q9UJ99 828 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 EXOC7Q9UPT5 735 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 PCDHB13Q9Y5F0 798 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 MYH15Q9Y2K3 1946 aa15.13■□□□□ 0.01
VARS-225ENST00000482996 TTC26A0AVF1 554 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 TGM5O43548 720 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 XPOTO43592 962 aaKnown RBP15.12■□□□□ 0.01
VARS-225ENST00000482996 FGFR3P22607 806 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 AMPD3Q01432 767 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 ALCAMQ13740 583 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 KANK3Q6NY19 840 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 CYP26C1Q6V0L0 522 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 C15orf39Q6ZRI6 1047 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 CCDC65Q8IXS2 484 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 KREMEN2Q8NCW0 462 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 LNX1Q8TBB1 728 aaPredicted RBP15.12■□□□□ 0.01
VARS-225ENST00000482996 C18orf25Q96B23 403 aaPredicted RBP15.12■□□□□ 0.01
VARS-225ENST00000482996 KIF12Q96FN5 646 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 ACCSQ96QU6 501 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 TSPAN18Q96SJ8 248 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 OLFML3Q9NRN5 406 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 PANK4Q9NVE7 773 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 FAM13BQ9NYF5 915 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 TBC1D7Q9P0N9 293 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 MUTYHQ9UIF7 546 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 NUB1Q9Y5A7 615 aa15.12■□□□□ 0.01
VARS-225ENST00000482996 FRMD3A2A2Y4 597 aa15.11■□□□□ 0.01
VARS-225ENST00000482996 LACTBL1A8MY62 500 aa15.11■□□□□ 0.01
VARS-225ENST00000482996 MEFVO15553 781 aaPredicted RBP15.11■□□□□ 0.01
VARS-225ENST00000482996 GPR37L1O60883 481 aa15.11■□□□□ 0.01
VARS-225ENST00000482996 GCNT3O95395 438 aa15.11■□□□□ 0.01
VARS-225ENST00000482996 SPATA31D3P0C874 917 aa15.11■□□□□ 0.01
VARS-225ENST00000482996 SP100P23497 879 aaPredicted RBP15.11■□□□□ 0.01
VARS-225ENST00000482996 TNFSF9P41273 254 aa15.11■□□□□ 0.01
VARS-225ENST00000482996 BRCC3P46736 316 aa15.11■□□□□ 0.01
VARS-225ENST00000482996 DNM1Q05193 864 aaKnown RBP15.11■□□□□ 0.01
VARS-225ENST00000482996 POSTNQ15063 836 aa15.11■□□□□ 0.01
VARS-225ENST00000482996 ENOX2Q16206 610 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms