RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 APBA1Q02410 837 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 TCTN1Q2MV58 587 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 TDRD10Q5VZ19 366 aaKnown RBP16.26■□□□□ 0.19
PHGDH-205ENST00000482968 ALKAL1Q6UXT8 129 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 SLC24A5Q71RS6 500 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 CD302Q8IX05 232 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 ABHD8Q96I13 439 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 SNX27Q96L92 541 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 LSM14BQ9BX40 385 aaKnown RBP16.26■□□□□ 0.19
PHGDH-205ENST00000482968 MTMR12Q9C0I1 747 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.26■□□□□ 0.192e-6■■■■□ 22.3
PHGDH-205ENST00000482968 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.26■□□□□ 0.19
PHGDH-205ENST00000482968 ITIH6Q6UXX5 1313 aa16.25■□□□□ 0.19
PHGDH-205ENST00000482968 ENPP3O14638 875 aa16.25■□□□□ 0.19
PHGDH-205ENST00000482968 PHACTR2O75167 634 aa16.25■□□□□ 0.19
PHGDH-205ENST00000482968 SKIP12755 728 aa16.25■□□□□ 0.19
PHGDH-205ENST00000482968 TRIM21P19474 475 aaKnown RBP16.25■□□□□ 0.19
PHGDH-205ENST00000482968 AP3M2P53677 418 aa16.25■□□□□ 0.19
PHGDH-205ENST00000482968 ZACNQ401N2 412 aa16.25■□□□□ 0.19
PHGDH-205ENST00000482968 GLRA4Q5JXX5 417 aa16.25■□□□□ 0.19
PHGDH-205ENST00000482968 C15orf39Q6ZRI6 1047 aa16.25■□□□□ 0.19
PHGDH-205ENST00000482968 MRPL10Q7Z7H8 261 aaKnown RBP16.25■□□□□ 0.19
PHGDH-205ENST00000482968 ECHDC2Q86YB7 292 aa16.25■□□□□ 0.19
PHGDH-205ENST00000482968 EHBP1Q8NDI1 1231 aa16.25■□□□□ 0.19
PHGDH-205ENST00000482968 FBXL13Q8NEE6 735 aa16.25■□□□□ 0.19
PHGDH-205ENST00000482968 TAS1R2Q8TE23 839 aa16.25■□□□□ 0.19
PHGDH-205ENST00000482968 CACTINQ8WUQ7 758 aaKnown RBP16.25■□□□□ 0.19
PHGDH-205ENST00000482968 LINC01599Q8WXQ3 324 aa16.25■□□□□ 0.19
PHGDH-205ENST00000482968 APBB2Q92870 758 aa16.25■□□□□ 0.19
PHGDH-205ENST00000482968 KIF12Q96FN5 646 aa16.25■□□□□ 0.19
PHGDH-205ENST00000482968 ANKRD36BP1Q96IX9 119 aa16.25■□□□□ 0.19
PHGDH-205ENST00000482968 ZMAT2Q96NC0 199 aaKnown RBP16.25■□□□□ 0.19
PHGDH-205ENST00000482968 TSPYL2Q9H2G4 693 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-205ENST00000482968 C9IYK1 514 aa16.24■□□□□ 0.19
PHGDH-205ENST00000482968 PMM2O15305 246 aa16.24■□□□□ 0.19
PHGDH-205ENST00000482968 TNNC2P02585 160 aa16.24■□□□□ 0.19
PHGDH-205ENST00000482968 TMEM132DQ14C87 1099 aa16.24■□□□□ 0.19
PHGDH-205ENST00000482968 EPC2Q52LR7 807 aa16.24■□□□□ 0.19
PHGDH-205ENST00000482968 SCARA3Q6AZY7 606 aa16.24■□□□□ 0.19
PHGDH-205ENST00000482968 AGMOQ6ZNB7 445 aa16.24■□□□□ 0.19
PHGDH-205ENST00000482968 TRAPPC11Q7Z392 1133 aa16.24■□□□□ 0.19
PHGDH-205ENST00000482968 PPFIBP1Q86W92 1011 aa16.24■□□□□ 0.19
PHGDH-205ENST00000482968 TMEM130Q8N3G9 435 aa16.24■□□□□ 0.19
PHGDH-205ENST00000482968 NEK11Q8NG66 645 aa16.24■□□□□ 0.19
PHGDH-205ENST00000482968 LMO3Q8TAP4 145 aa16.24■□□□□ 0.19
PHGDH-205ENST00000482968 SEMA4DQ92854 862 aa16.24■□□□□ 0.19
PHGDH-205ENST00000482968 RAB20Q9NX57 234 aa16.24■□□□□ 0.19
PHGDH-205ENST00000482968 IMPACTQ9P2X3 320 aa16.24■□□□□ 0.19
PHGDH-205ENST00000482968 COQ4Q9Y3A0 265 aa16.24■□□□□ 0.19
PHGDH-205ENST00000482968 SMIM28A0A1B0GU29 152 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 CCDC85CA6NKD9 419 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 EPHB6O15197 1021 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 OFD1O75665 1012 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 CST3P01034 146 aaPredicted RBP16.23■□□□□ 0.19
PHGDH-205ENST00000482968 PTMAP06454 111 aaKnown RBP16.23■□□□□ 0.19
PHGDH-205ENST00000482968 CSF2RAP15509 400 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 ATF7P17544 494 aaPredicted RBP16.23■□□□□ 0.19
PHGDH-205ENST00000482968 LRMPQ12912 555 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 TBX2Q13207 712 aaPredicted RBP16.23■□□□□ 0.19
PHGDH-205ENST00000482968 TRIM65Q6PJ69 517 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 CCDC186Q7Z3E2 898 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 ELMO3Q96BJ8 720 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 PGBD4Q96DM1 585 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 ZFP42Q96MM3 310 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 GAD1Q99259 594 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 NUP58Q9BVL2 599 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 INTS2Q9H0H0 1204 aaKnown RBP16.23■□□□□ 0.19
PHGDH-205ENST00000482968 C1orf112Q9NSG2 853 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 CNTN3Q9P232 1028 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 PRKAG2Q9UGJ0 569 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 C2CD2Q9Y426 696 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 ALPK3Q96L96 1907 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 GOLGA6L6A8MZA4 724 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 RNF225M0QZC1 329 aaPredicted RBP16.23■□□□□ 0.19
PHGDH-205ENST00000482968 NOL4O94818 638 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 VNN1O95497 513 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 HLA-DRAP01903 254 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 GYPCP04921 128 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 CASP14P31944 242 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 RFC2P35250 354 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 MLH1P40692 756 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 PIK3CAP42336 1068 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 AFF1P51825 1210 aaKnown RBP16.23■□□□□ 0.19
PHGDH-205ENST00000482968 FAM189BP81408 668 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 GOLGA8FQ08AF8 430 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 GOLGA8DPQ0D2H9 430 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 XKR4Q5GH76 650 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 MFSD5Q6N075 450 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 DPY19L2P1Q6NXN4 242 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 TMEM199Q8N511 208 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 PI4K2AQ9BTU6 479 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 GIT1Q9Y2X7 761 aa16.23■□□□□ 0.19
PHGDH-205ENST00000482968 ARL5CA6NH57 179 aa16.22■□□□□ 0.19
PHGDH-205ENST00000482968 EOMESO95936 686 aa16.22■□□□□ 0.19
PHGDH-205ENST00000482968 KRT19P08727 400 aa16.22■□□□□ 0.19
PHGDH-205ENST00000482968 FXR1P51114 621 aaKnown RBP eCLIP16.22■□□□□ 0.19
PHGDH-205ENST00000482968 GUCY2FP51841 1108 aa16.22■□□□□ 0.19
PHGDH-205ENST00000482968 ADKP55263 362 aaKnown RBP16.22■□□□□ 0.19
PHGDH-205ENST00000482968 NCOA4Q13772 614 aa16.22■□□□□ 0.19
PHGDH-205ENST00000482968 ZBTB6Q15916 424 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms