RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 ZBP1Q9H171 429 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 IGFLR1Q9H665 355 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 PLEKHA5Q9HAU0 1116 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 PRDM6Q9NQX0 595 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 THEGQ9P2T0 379 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 HOOK1Q9UJC3 728 aaKnown RBP9.55□□□□□ -0.88
SNX4-205ENST00000482965 CPSF3Q9UKF6 684 aaKnown RBP9.55□□□□□ -0.88
SNX4-205ENST00000482965 ADAM28Q9UKQ2 775 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 CDH23Q9H251 3354 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.54□□□□□ -0.88
SNX4-205ENST00000482965 TTC26A0AVF1 554 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 LACTBL1A8MY62 500 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 F8W810 466 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 TULP1O00294 542 aaPredicted RBP9.54□□□□□ -0.88
SNX4-205ENST00000482965 MEFVO15553 781 aaPredicted RBP9.54□□□□□ -0.88
SNX4-205ENST00000482965 XPOTO43592 962 aaKnown RBP9.54□□□□□ -0.88
SNX4-205ENST00000482965 NCK2O43639 380 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 FAM189A1O60320 539 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 KINO60870 393 aaKnown RBP9.54□□□□□ -0.88
SNX4-205ENST00000482965 KIF4AO95239 1232 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 CXCL14O95715 111 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 LDHAP00338 332 aaKnown RBP9.54□□□□□ -0.88
SNX4-205ENST00000482965 SOD2P04179 222 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 URODP06132 367 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 CTSAP10619 480 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 NRIP1P48552 1158 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 SOX4Q06945 474 aaPredicted RBP9.54□□□□□ -0.88
SNX4-205ENST00000482965 SPAG1Q07617 926 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 HYAL1Q12794 435 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 STK4Q13043 487 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 SNW1Q13573 536 aaKnown RBP9.54□□□□□ -0.88
SNX4-205ENST00000482965 FUT10Q6P4F1 479 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 HS2ST1Q7LGA3 356 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 RBM23Q86U06 439 aaKnown RBP9.54□□□□□ -0.88
SNX4-205ENST00000482965 CD302Q8IX05 232 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 HASPINQ8TF76 798 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 SCFD1Q8WVM8 642 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 AUTS2Q8WXX7 1259 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 HLA-CQ95604 372 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 C18orf25Q96B23 403 aaPredicted RBP9.54□□□□□ -0.88
SNX4-205ENST00000482965 SAAL1Q96ER3 474 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 DDX27Q96GQ7 796 aaKnown RBP9.54□□□□□ -0.88
SNX4-205ENST00000482965 TIGD1Q96MW7 591 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 CBWD1Q9BRT8 395 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 FAM213AQ9BRX8 229 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 HERC2P3Q9BVR0 1158 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 VN1R3Q9BXE9 311 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 PCIF1Q9H4Z3 704 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 TLE6Q9H808 572 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 GOLGA2P5Q9HBQ8 144 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 COG5Q9UP83 839 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 VWA8A3KMH1 1905 aa9.54□□□□□ -0.88
SNX4-205ENST00000482965 SF3B1O75533 1304 aaKnown RBP eCLIP9.54□□□□□ -0.88
SNX4-205ENST00000482965 TRANK1O15050 2925 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 GOLGA8IPA6NC78 632 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 C2orf71A6NGG8 1288 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 GOLGA8JA6NMD2 632 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 HIDE1A8MVS5 230 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 PODXLO00592 558 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 C2CD2LO14523 706 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 PER2O15055 1255 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 KIAA0391O15091 583 aaKnown RBP9.53□□□□□ -0.88
SNX4-205ENST00000482965 EXTL3O43909 919 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 B3GAT3O94766 335 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 RHOBTB3O94955 611 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 SMC2O95347 1197 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 GTF2F1P35269 517 aaKnown RBP eCLIP9.53□□□□□ -0.88
SNX4-205ENST00000482965 HOXD13P35453 343 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 GLUD2P49448 558 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 CLCNKBP51801 687 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 UBE2HP62256 183 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 POU5F1Q01860 360 aaKnown RBP9.53□□□□□ -0.88
SNX4-205ENST00000482965 PNOCQ13519 176 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 KCNB1Q14721 858 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 TMEM132DQ14C87 1099 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 DUSP6Q16828 381 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 KNOP1Q1ED39 458 aaKnown RBP9.53□□□□□ -0.88
SNX4-205ENST00000482965 BMT2Q1RMZ1 405 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 KIAA1841Q6NSI8 718 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 DCLRE1AQ6PJP8 1040 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.53□□□□□ -0.88
SNX4-205ENST00000482965 GPD1LQ8N335 351 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 MRPL43Q8N983 215 aaKnown RBP9.53□□□□□ -0.88
SNX4-205ENST00000482965 KIAA0895Q8NCT3 520 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 BEST2Q8NFU1 509 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 RNF25Q96BH1 459 aaPredicted RBP9.53□□□□□ -0.88
SNX4-205ENST00000482965 PABPC5Q96DU9 382 aaKnown RBP9.53□□□□□ -0.88
SNX4-205ENST00000482965 TSPAN18Q96SJ8 248 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 CDCA3Q99618 268 aaPredicted RBP9.53□□□□□ -0.88
SNX4-205ENST00000482965 GPR62Q9BZJ7 368 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 UBE2ZQ9H832 354 aaPredicted RBP9.53□□□□□ -0.88
SNX4-205ENST00000482965 MRPL17Q9NRX2 175 aaKnown RBP9.53□□□□□ -0.88
SNX4-205ENST00000482965 AGPAT3Q9NRZ7 376 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 CLDND1Q9NY35 253 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 HSPBP1Q9NZL4 362 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 TUBGCP4Q9UGJ1 667 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 UBQLN1Q9UMX0 589 aaKnown RBP9.53□□□□□ -0.88
SNX4-205ENST00000482965 SSX2IPQ9Y2D8 614 aa9.53□□□□□ -0.88
SNX4-205ENST00000482965 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.53□□□□□ -0.88
SNX4-205ENST00000482965 TCF20Q9UGU0 1960 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms