RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 GJA3Q9Y6H8 435 aa15.25■□□□□ 0.03
COL9A2-207ENST00000482722 FOXN3O00409 490 aaPredicted RBP15.25■□□□□ 0.03
COL9A2-207ENST00000482722 TBX3O15119 743 aa15.25■□□□□ 0.03
COL9A2-207ENST00000482722 VIL1P09327 827 aaKnown RBP15.25■□□□□ 0.03
COL9A2-207ENST00000482722 ALAS1P13196 640 aa15.25■□□□□ 0.03
COL9A2-207ENST00000482722 PTDSS1P48651 473 aaKnown RBP15.25■□□□□ 0.03
COL9A2-207ENST00000482722 SLC5A9Q2M3M2 681 aa15.25■□□□□ 0.03
COL9A2-207ENST00000482722 MOXD1Q6UVY6 613 aa15.25■□□□□ 0.03
COL9A2-207ENST00000482722 INTS8Q75QN2 995 aaKnown RBP15.25■□□□□ 0.03
COL9A2-207ENST00000482722 TTC8Q8TAM2 541 aa15.25■□□□□ 0.03
COL9A2-207ENST00000482722 SH2D3AQ9BRG2 576 aa15.25■□□□□ 0.03
COL9A2-207ENST00000482722 STK33Q9BYT3 514 aa15.25■□□□□ 0.03
COL9A2-207ENST00000482722 SYNGAP1Q96PV0 1343 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 E7ENQ6 273 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 FOSP01100 380 aaPredicted RBP15.24■□□□□ 0.03
COL9A2-207ENST00000482722 SP100P23497 879 aaPredicted RBP15.24■□□□□ 0.03
COL9A2-207ENST00000482722 FOXN2P32314 431 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 PSMC2P35998 433 aaKnown RBP15.24■□□□□ 0.03
COL9A2-207ENST00000482722 RFC5P40937 340 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 GCLCP48506 637 aaPredicted RBP15.24■□□□□ 0.03
COL9A2-207ENST00000482722 FMO5P49326 533 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 KLC1Q07866 573 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 CCDC15Q0P6D6 951 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 LBRQ14739 615 aaKnown RBP15.24■□□□□ 0.03
COL9A2-207ENST00000482722 ZNF568Q3ZCX4 644 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 RNF220Q5VTB9 566 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 ASAP3Q8TDY4 903 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 WDR18Q9BV38 432 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 ACP6Q9NPH0 428 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 AAASQ9NRG9 546 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 IRAK4Q9NWZ3 460 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 TBK1Q9UHD2 729 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 PRR12Q9ULL5 1215 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 CNTNAP1P78357 1384 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 ABLIM1O14639 778 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 FTLP02792 175 aaPredicted RBP15.24■□□□□ 0.03
COL9A2-207ENST00000482722 PYGMP11217 842 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 R3HDM1Q15032 1099 aaKnown RBP15.24■□□□□ 0.03
COL9A2-207ENST00000482722 SGSM1Q2NKQ1 1148 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 ODR4Q5SWX8 454 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 TRMT10CQ7L0Y3 403 aaKnown RBP15.24■□□□□ 0.03
COL9A2-207ENST00000482722 FAM178BQ8IXR5 827 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 NIM1KQ8IY84 436 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 SYCP3Q8IZU3 236 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 CYP4X1Q8N118 509 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 MAGEB18Q96M61 343 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 PITPNM3Q9BZ71 974 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 ZCWPW1Q9H0M4 648 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 DLGAP2Q9P1A6 1054 aa15.24■□□□□ 0.03
COL9A2-207ENST00000482722 SLITRK3O94933 977 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 TAC1P20366 129 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 COMTP21964 271 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 CNGA1P29973 690 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 ALDH3A1P30838 453 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 MKRN3Q13064 507 aaKnown RBP15.23■□□□□ 0.03
COL9A2-207ENST00000482722 ACVR2BQ13705 512 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 TRIP13Q15645 432 aaPredicted RBP15.23■□□□□ 0.03
COL9A2-207ENST00000482722 HS2ST1Q7LGA3 356 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 LONP2Q86WA8 852 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 RTKN2Q8IZC4 609 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 AGGF1Q8N302 714 aaeCLIP15.23■□□□□ 0.03
COL9A2-207ENST00000482722 DNAJC9Q8WXX5 260 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 MRIQ9BWK5 157 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 TAOK3Q9H2K8 898 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 PARVGQ9HBI0 331 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 ZMYM2Q9UBW7 1377 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 GAS7O60861 476 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 HSPA6P17066 643 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 COILP38432 576 aaPredicted RBP15.23■□□□□ 0.03
COL9A2-207ENST00000482722 CLUL1Q15846 466 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 CMPK2Q5EBM0 449 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 PHLDB3Q6NSJ2 640 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.23■□□□□ 0.03
COL9A2-207ENST00000482722 ELMO3Q96BJ8 720 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 PWWP2AQ96N64 755 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 KIAA1683Q9H0B3 1180 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 PCIF1Q9H4Z3 704 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 WDR35Q9P2L0 1181 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 ZNRF3Q9ULT6 936 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 CHKBQ9Y259 395 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 QSER1Q2KHR3 1735 aa15.23■□□□□ 0.03
COL9A2-207ENST00000482722 ANKRD62A6NC57 917 aa15.22■□□□□ 0.03
COL9A2-207ENST00000482722 SLC16A3O15427 465 aaKnown RBP15.22■□□□□ 0.03
COL9A2-207ENST00000482722 EXOC3O60645 756 aa15.22■□□□□ 0.03
COL9A2-207ENST00000482722 ENTPD5O75356 428 aa15.22■□□□□ 0.03
COL9A2-207ENST00000482722 EPHB2P29323 1055 aa15.22■□□□□ 0.03
COL9A2-207ENST00000482722 MTHFD1LQ6UB35 978 aa15.22■□□□□ 0.03
COL9A2-207ENST00000482722 ENDOVQ8N8Q3 282 aaKnown RBP15.22■□□□□ 0.03
COL9A2-207ENST00000482722 UCMAQ8WVF2 138 aa15.22■□□□□ 0.03
COL9A2-207ENST00000482722 BORCS6Q96GS4 357 aa15.22■□□□□ 0.03
COL9A2-207ENST00000482722 SYT11Q9BT88 431 aa15.22■□□□□ 0.03
COL9A2-207ENST00000482722 TBC1D10AQ9BXI6 508 aa15.22■□□□□ 0.03
COL9A2-207ENST00000482722 INTS2Q9H0H0 1204 aaKnown RBP15.22■□□□□ 0.03
COL9A2-207ENST00000482722 FRMD4BQ9Y2L6 1034 aa15.22■□□□□ 0.03
COL9A2-207ENST00000482722 TISP43B9A030 160 aa15.22■□□□□ 0.03
COL9A2-207ENST00000482722 ACADSP16219 412 aa15.22■□□□□ 0.03
COL9A2-207ENST00000482722 ATP5DP30049 168 aa15.22■□□□□ 0.03
COL9A2-207ENST00000482722 CHKAP35790 457 aa15.22■□□□□ 0.03
COL9A2-207ENST00000482722 POLGP54098 1239 aaPredicted RBP15.22■□□□□ 0.03
COL9A2-207ENST00000482722 TSNAXIP1Q2TAA8 658 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms