RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 FSD2A1L4K1 749 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 IL18RAPO95256 599 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 NFICP08651 508 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 DLATP10515 647 aaKnown RBP21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 ANK1P16157 1881 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 DNAJB2P25686 324 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 CYP24A1Q07973 514 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 GRIK3Q13003 919 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 ZNF280BQ86YH2 543 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 FAM186BQ8IYM0 893 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 SAMSN1Q9NSI8 373 aaKnown RBP21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 CACNG4Q9UBN1 327 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 INPPL1O15357 1258 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 ARHGEF15O94989 841 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 EPB41P11171 864 aaKnown RBP21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 PSMC2P35998 433 aaKnown RBP21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 PBX3P40426 434 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 SMAD3P84022 425 aaKnown RBP21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 LRIT3Q3SXY7 679 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 LMBRD2Q68DH5 695 aaPredicted RBP21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 SP7Q8TDD2 431 aaPredicted RBP21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 TMEM174Q8WUU8 243 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 C18orf25Q96B23 403 aaPredicted RBP21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 FNBP1Q96RU3 617 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 SRRTQ9BXP5 876 aaKnown RBP21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 GOLGA2P5Q9HBQ8 144 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 DNAJB4Q9UDY4 337 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 MTUS1Q9ULD2 1270 aa21.6■■□□□ 1.05
TRAPPC12-220ENST00000482645 LINC01553A4QN01 128 aa21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 CASTOR2A6NHX0 329 aa21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 DDHD2O94830 711 aa21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 KCNE1P15382 129 aa21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 TFAMQ00059 246 aaKnown RBP21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 TMEM132DQ14C87 1099 aa21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 XKR4Q5GH76 650 aa21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 PPP2R2DQ66LE6 453 aa21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 FOXR2Q6PJQ5 311 aa21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 CREBRFQ8IUR6 639 aa21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 CD302Q8IX05 232 aa21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 TMEM130Q8N3G9 435 aa21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 RSPH1Q8WYR4 309 aa21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 RABGGTAQ92696 567 aa21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 FAM84AQ96KN4 292 aa21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 PPP1R10Q96QC0 940 aaKnown RBP21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 HSD3B7Q9H2F3 369 aa21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 ASB7Q9H672 318 aa21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 NRDE2Q9H7Z3 1164 aa21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 GRPEL1Q9HAV7 217 aa21.59■■□□□ 1.05
TRAPPC12-220ENST00000482645 PDCD11Q14690 1871 aaKnown RBP21.58■■□□□ 1.05
TRAPPC12-220ENST00000482645 B4GALT3O60512 393 aa21.58■■□□□ 1.04
TRAPPC12-220ENST00000482645 SPRED2Q7Z698 418 aa21.58■■□□□ 1.04
TRAPPC12-220ENST00000482645 ZC3H3Q8IXZ2 948 aaKnown RBP21.58■■□□□ 1.04
TRAPPC12-220ENST00000482645 EFCAB13Q8IY85 973 aa21.58■■□□□ 1.04
TRAPPC12-220ENST00000482645 TIFAQ96CG3 184 aa21.58■■□□□ 1.04
TRAPPC12-220ENST00000482645 CEP63Q96MT8 703 aa21.58■■□□□ 1.04
TRAPPC12-220ENST00000482645 POP1Q99575 1024 aaKnown RBP21.58■■□□□ 1.04
TRAPPC12-220ENST00000482645 THAP9Q9H5L6 903 aa21.58■■□□□ 1.04
TRAPPC12-220ENST00000482645 CWH43Q9H720 699 aa21.58■■□□□ 1.04
TRAPPC12-220ENST00000482645 SLC28A3Q9HAS3 691 aa21.58■■□□□ 1.04
TRAPPC12-220ENST00000482645 SLC38A7Q9NVC3 462 aa21.58■■□□□ 1.04
TRAPPC12-220ENST00000482645 TUBGCP4Q9UGJ1 667 aa21.58■■□□□ 1.04
TRAPPC12-220ENST00000482645 CDH23Q9H251 3354 aa21.58■■□□□ 1.04
TRAPPC12-220ENST00000482645 FGFR1OPO95684 399 aaKnown RBP21.57■■□□□ 1.04
TRAPPC12-220ENST00000482645 ATP1A3P13637 1013 aa21.57■■□□□ 1.04
TRAPPC12-220ENST00000482645 KRT13P13646 458 aa21.57■■□□□ 1.04
TRAPPC12-220ENST00000482645 TNNI1P19237 187 aa21.57■■□□□ 1.04
TRAPPC12-220ENST00000482645 OR1G1P47890 313 aa21.57■■□□□ 1.04
TRAPPC12-220ENST00000482645 GUCY2FP51841 1108 aa21.57■■□□□ 1.04
TRAPPC12-220ENST00000482645 POU5F1Q01860 360 aaKnown RBP21.57■■□□□ 1.04
TRAPPC12-220ENST00000482645 SOX4Q06945 474 aaPredicted RBP21.57■■□□□ 1.04
TRAPPC12-220ENST00000482645 PSMD6Q15008 389 aa21.57■■□□□ 1.04
TRAPPC12-220ENST00000482645 CCDC40Q4G0X9 1142 aa21.57■■□□□ 1.04
TRAPPC12-220ENST00000482645 CDKAL1Q5VV42 579 aa21.57■■□□□ 1.04
TRAPPC12-220ENST00000482645 CNOT6LQ96LI5 555 aaKnown RBP21.57■■□□□ 1.04
TRAPPC12-220ENST00000482645 MFSD14AQ96MC6 490 aa21.57■■□□□ 1.04
TRAPPC12-220ENST00000482645 CERS4Q9HA82 394 aa21.57■■□□□ 1.04
TRAPPC12-220ENST00000482645 KIAA1671Q9BY89 1806 aa21.57■■□□□ 1.04
TRAPPC12-220ENST00000482645 NT5C1B-RDH14C9J2C7 533 aa21.56■■□□□ 1.04
TRAPPC12-220ENST00000482645 SLC16A3O15427 465 aaKnown RBP21.56■■□□□ 1.04
TRAPPC12-220ENST00000482645 BCAR1P56945 870 aa21.56■■□□□ 1.04
TRAPPC12-220ENST00000482645 TUSC3Q13454 348 aa21.56■■□□□ 1.04
TRAPPC12-220ENST00000482645 SURF1Q15526 300 aa21.56■■□□□ 1.04
TRAPPC12-220ENST00000482645 FAM114A1Q8IWE2 563 aa21.56■■□□□ 1.04
TRAPPC12-220ENST00000482645 COLGALT2Q8IYK4 626 aa21.56■■□□□ 1.04
TRAPPC12-220ENST00000482645 PLEKHO2Q8TD55 490 aa21.56■■□□□ 1.04
TRAPPC12-220ENST00000482645 C17orf80Q9BSJ5 609 aa21.56■■□□□ 1.04
TRAPPC12-220ENST00000482645 MKNK1Q9BUB5 465 aa21.56■■□□□ 1.04
TRAPPC12-220ENST00000482645 MAGEC2Q9UBF1 373 aaPredicted RBP21.56■■□□□ 1.04
TRAPPC12-220ENST00000482645 UBQLN1Q9UMX0 589 aaKnown RBP21.56■■□□□ 1.04
TRAPPC12-220ENST00000482645 PRG3Q9Y2Y8 225 aaPredicted RBP21.56■■□□□ 1.04
TRAPPC12-220ENST00000482645 KCNJ18B7U540 433 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 XPOTO43592 962 aaKnown RBP21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 TMEM191BP0C7N4 346 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 ZNF18P17022 549 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 LAG3P18627 525 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 CTNNB1P35222 781 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 ALDH7A1P49419 539 aaKnown RBP21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 VAMP7P51809 220 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 DLG4P78352 724 aa21.55■■□□□ 1.04
TRAPPC12-220ENST00000482645 PLCB2Q00722 1185 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms