RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 NME2P22392 152 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 CASQ1P31415 396 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 PRCPP42785 496 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 ASIC1P78348 528 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 GSTM4Q03013 218 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 LMNB2Q03252 620 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 LRRC63Q05C16 580 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 LONRF2Q1L5Z9 754 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 FIGNQ5HY92 759 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 HYIQ5T013 277 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 JAKMIP3Q5VZ66 844 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 SLFN13Q68D06 897 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 RASGRP2Q7LDG7 609 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 CCDC84Q86UT8 332 aaPredicted RBP8.47□□□□□ -1.05
SNX13-208ENST00000482558 ZBTB46Q86UZ6 589 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 REXO1L1PQ8IX06 675 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 GUF1Q8N442 669 aaKnown RBP8.47□□□□□ -1.05
SNX13-208ENST00000482558 C12orf50Q8NA57 414 aaPredicted RBP8.47□□□□□ -1.05
SNX13-208ENST00000482558 ZNF397Q8NF99 534 aaPredicted RBP8.47□□□□□ -1.05
SNX13-208ENST00000482558 ERMNQ8TAM6 284 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 LARP4BQ92615 738 aaKnown RBP8.47□□□□□ -1.05
SNX13-208ENST00000482558 P2RX5Q93086 422 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 MED15Q96RN5 788 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 TSG101Q99816 390 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 CCDC94Q9BW85 323 aaPredicted RBP8.47□□□□□ -1.05
SNX13-208ENST00000482558 AMNQ9BXJ7 453 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 KRTAP4-2Q9BYR5 136 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 BLZF1Q9H2G9 400 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 SH2D4AQ9H788 454 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 ARGLU1Q9NWB6 273 aaPredicted RBP8.47□□□□□ -1.05
SNX13-208ENST00000482558 DDX25Q9UHL0 483 aaKnown RBP8.47□□□□□ -1.05
SNX13-208ENST00000482558 ZNF180Q9UJW8 692 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 A0A1W2PQJ5 194 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 SOX1O00570 391 aaPredicted RBP8.46□□□□□ -1.06
SNX13-208ENST00000482558 EIF4EBP3O60516 100 aaPredicted RBP8.46□□□□□ -1.06
SNX13-208ENST00000482558 GNA14O95837 355 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 TUBBP07437 444 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 TECP42680 631 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 HTR3AP46098 478 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 PPM1FP49593 454 aaPredicted RBP8.46□□□□□ -1.06
SNX13-208ENST00000482558 RBM5P52756 815 aaKnown RBP eCLIP8.46□□□□□ -1.06
SNX13-208ENST00000482558 STX17P56962 302 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 RPS26P62854 115 aaKnown RBP8.46□□□□□ -1.06
SNX13-208ENST00000482558 KRT83P78385 493 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 UBXN1Q04323 297 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 ICA1Q05084 483 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 ITKQ08881 620 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 CAMK2GQ13555 558 aaPredicted RBP8.46□□□□□ -1.06
SNX13-208ENST00000482558 ABCB5Q2M3G0 1257 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 TMEM119Q4V9L6 283 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 SEZ6Q53EL9 994 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 CCDC93Q567U6 631 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 FKBP15Q5T1M5 1219 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 HAUS3Q68CZ6 603 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 BTNL9Q6UXG8 535 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 SYT10Q6XYQ8 523 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 LRRC47Q8N1G4 583 aaKnown RBP8.46□□□□□ -1.06
SNX13-208ENST00000482558 SDR16C5Q8N3Y7 309 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 CSGALNACT2Q8N6G5 542 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 ANKRD42Q8N9B4 389 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 OR8K1Q8NGG5 319 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 RAD54LQ92698 747 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 FAM20AQ96MK3 541 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 MBOAT7Q96N66 472 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 NUP88Q99567 741 aaPredicted RBP8.46□□□□□ -1.06
SNX13-208ENST00000482558 EDEM3Q9BZQ6 932 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 EHMT1Q9H9B1 1298 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 PCDHA12Q9UN75 941 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 GTF2A1LQ9UNN4 478 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 TLR6Q9Y2C9 796 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 LUC7L2Q9Y383 392 aaKnown RBP8.46□□□□□ -1.06
SNX13-208ENST00000482558 RABGAP1Q9Y3P9 1069 aa8.46□□□□□ -1.06
SNX13-208ENST00000482558 FRMPD2Q68DX3 1309 aaPredicted RBP8.46□□□□□ -1.06
SNX13-208ENST00000482558 COL11A2P13942 1736 aaPredicted RBP8.46□□□□□ -1.06
SNX13-208ENST00000482558 EFCAB8A8MWE9 144 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 PLA2G6O60733 806 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 RFPL1O75677 317 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 IPO7O95373 1038 aaKnown RBP8.45□□□□□ -1.06
SNX13-208ENST00000482558 EEF2P13639 858 aaKnown RBP8.45□□□□□ -1.06
SNX13-208ENST00000482558 MUTP22033 750 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 ADKP55263 362 aaKnown RBP8.45□□□□□ -1.06
SNX13-208ENST00000482558 RBM10P98175 930 aaKnown RBP8.45□□□□□ -1.06
SNX13-208ENST00000482558 CDK17Q00537 523 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 NCBP1Q09161 790 aaKnown RBP8.45□□□□□ -1.06
SNX13-208ENST00000482558 MTMR1Q13613 665 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 SLC15A2Q16348 729 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 PPP2R5EQ16537 467 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 Q4G0T1 1027 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 CENPPQ6IPU0 288 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 TTI2Q6NXR4 508 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 TRIM65Q6PJ69 517 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 AGMOQ6ZNB7 445 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 CCDC170Q8IYT3 715 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 MB21D1Q8N884 522 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 MNS1Q8NEH6 495 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 COA7Q96BR5 231 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 EMILIN2Q9BXX0 1053 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 TNKS2Q9H2K2 1166 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 DBNDD1Q9H9R9 158 aa8.45□□□□□ -1.06
SNX13-208ENST00000482558 ABHD10Q9NUJ1 306 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms