RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 SNHG28P0DPA3 235 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 HOXA7P31268 230 aaPredicted RBP13.51□□□□□ -0.25
VPS52-218ENST00000482399 ARSEP51690 589 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 SPIRE1Q08AE8 756 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 PDIA2Q13087 525 aaKnown RBP13.51□□□□□ -0.25
VPS52-218ENST00000482399 SNRNP35Q16560 246 aaKnown RBP13.51□□□□□ -0.25
VPS52-218ENST00000482399 MEX3CQ5U5Q3 659 aaKnown RBP13.51□□□□□ -0.25
VPS52-218ENST00000482399 TMEM270Q6UE05 265 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 CCDC89Q8N998 374 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 RXFP1Q9HBX9 757 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 CCPG1Q9ULG6 757 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 SLC12A4Q9UP95 1085 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 AFF2P51816 1311 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 PARP4Q9UKK3 1724 aaKnown RBP13.51□□□□□ -0.25
VPS52-218ENST00000482399 ITIH2P19823 946 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 RASSF2P50749 326 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 THEMIS2Q5TEJ8 643 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 SPOPLQ6IQ16 392 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 TMEM179Q6ZVK1 233 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 ECHDC2Q86YB7 292 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 ATL2Q8NHH9 583 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 SERPINB12Q96P63 405 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 TRAIPQ9BWF2 469 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 CNOT7Q9UIV1 285 aaKnown RBP13.51□□□□□ -0.25
VPS52-218ENST00000482399 SUGT1Q9Y2Z0 365 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 GABPAQ06546 454 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 LIN9Q5TKA1 542 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 PALM2Q8IXS6 379 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 SPDYE1Q8NFV5 336 aaPredicted RBP13.51□□□□□ -0.25
VPS52-218ENST00000482399 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.51□□□□□ -0.25
VPS52-218ENST00000482399 NAF1Q96HR8 494 aaKnown RBP13.51□□□□□ -0.25
VPS52-218ENST00000482399 WDR11Q9BZH6 1224 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 SYNCQ9H7C4 482 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 TMEM206Q9H813 350 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 GINM1Q9NU53 330 aa13.51□□□□□ -0.25
VPS52-218ENST00000482399 TROVE2P10155 538 aaKnown RBP eCLIP13.5□□□□□ -0.25
VPS52-218ENST00000482399 KITP10721 976 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 PIK3CAP42336 1068 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 PKN2Q16513 984 aaKnown RBP13.5□□□□□ -0.25
VPS52-218ENST00000482399 KRT39Q6A163 491 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 VSTM1Q6UX27 236 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 PDCD7Q8N8D1 485 aaKnown RBP13.5□□□□□ -0.25
VPS52-218ENST00000482399 TTC8Q8TAM2 541 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 MAML1Q92585 1016 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 ART4Q93070 314 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 ZNF570Q96NI8 536 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 MKNK1Q9BUB5 465 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 POLR3CQ9BUI4 534 aaPredicted RBP13.5□□□□□ -0.25
VPS52-218ENST00000482399 OSBPL8Q9BZF1 889 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 ROPN1BQ9BZX4 212 aaPredicted RBP13.5□□□□□ -0.25
VPS52-218ENST00000482399 KIAA1683Q9H0B3 1180 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 ROPN1Q9HAT0 212 aaPredicted RBP13.5□□□□□ -0.25
VPS52-218ENST00000482399 KMT5AQ9NQR1 393 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 LRRC4BQ9NT99 713 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 RAB20Q9NX57 234 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 DLGAP2Q9P1A6 1054 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 PCYOX1Q9UHG3 505 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 NEU2Q9Y3R4 380 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 NCANO14594 1321 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 TBX3O15119 743 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 EIF3DO15371 548 aaKnown RBP eCLIP13.5□□□□□ -0.25
VPS52-218ENST00000482399 TLR3O15455 904 aaKnown RBP13.5□□□□□ -0.25
VPS52-218ENST00000482399 CTCFP49711 727 aaPredicted RBP13.5□□□□□ -0.25
VPS52-218ENST00000482399 SEZ6Q53EL9 994 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 BTNL9Q6UXG8 535 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 CYFIP1Q7L576 1253 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 MTDHQ86UE4 582 aaKnown RBP13.5□□□□□ -0.25
VPS52-218ENST00000482399 CKAP2Q8WWK9 683 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 LENG9Q96B70 501 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 COA1Q9GZY4 146 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 ZWILCHQ9H900 591 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 VAV3Q9UKW4 847 aa13.5□□□□□ -0.25
VPS52-218ENST00000482399 ZMYND8Q9ULU4 1186 aaPredicted RBP13.5□□□□□ -0.25
VPS52-218ENST00000482399 CD19P15391 556 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 ACOT2P49753 483 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 BASP1P80723 227 aaKnown RBP13.49□□□□□ -0.25
VPS52-218ENST00000482399 TAF1BQ53T94 588 aaPredicted RBP13.49□□□□□ -0.25
VPS52-218ENST00000482399 AP1ARQ63HQ0 302 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 LVRNQ6Q4G3 990 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 HIPK4Q8NE63 616 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 SEMA4DQ92854 862 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 CFAP57Q96MR6 1250 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 TSC22D3Q99576 134 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 SAE1Q9UBE0 346 aaPredicted RBP13.49□□□□□ -0.25
VPS52-218ENST00000482399 IL1R1P14778 569 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 CHRNB2P17787 502 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 KRT4P19013 534 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 CDR2Q01850 454 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 DMP1Q13316 513 aaPredicted RBP13.49□□□□□ -0.25
VPS52-218ENST00000482399 BRDTQ58F21 947 aaPredicted RBP13.49□□□□□ -0.25
VPS52-218ENST00000482399 C11orf63Q6NUN7 778 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 PPFIBP2Q8ND30 876 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 FBXL13Q8NEE6 735 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 CFAP61Q8NHU2 1237 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 PPP1R14CQ8TAE6 165 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 CEP170P1Q96L14 293 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 KREMEN1Q96MU8 473 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 HSD17B14Q9BPX1 270 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 MARCOQ9UEW3 520 aaPredicted RBP13.49□□□□□ -0.25
VPS52-218ENST00000482399 GTF3C4Q9UKN8 822 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms