RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 PRSS55Q6UWB4 352 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 OTUD6AQ7L8S5 288 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 LONP2Q86WA8 852 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 CNNM3Q8NE01 707 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 TCP11Q8WWU5 503 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 RABGGTAQ92696 567 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 TCEAL3Q969E4 200 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 CCDC51Q96ER9 411 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 CPB2Q96IY4 423 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 ZFP42Q96MM3 310 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 GPR62Q9BZJ7 368 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 UBN1Q9NPG3 1134 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 PDRG1Q9NUG6 133 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 C2orf42Q9NWW7 574 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 FBXW11Q9UKB1 542 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 STK36Q9NRP7 1315 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 INO80B-WBP1J3KQ70 363 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 K7ESF4 209 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 NRG2O14511 850 aaPredicted RBP10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 ECI2O75521 394 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 ZNF806P0C7X5 589 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 SCNN1GP51170 649 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 MBTD1Q05BQ5 628 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 MXD4Q14582 209 aaPredicted RBP10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 PCBP1Q15365 356 aaKnown RBP eCLIP10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 AMHR2Q16671 573 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 PPM1LQ5SGD2 360 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 LIN9Q5TKA1 542 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 TANGO2Q6ICL3 276 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 MAMSTRQ6ZN01 415 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 Q6ZS52 159 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 TPH2Q8IWU9 490 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 ASAP3Q8TDY4 903 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 MCRS1Q96EZ8 462 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 MTRQ99707 1265 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 SCNM1Q9BWG6 230 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 APOL6Q9BWW8 343 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 CSRNP2Q9H175 543 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 NXF3Q9H4D5 531 aaKnown RBP10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 RBM12Q9NTZ6 932 aaKnown RBP10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 MIOSQ9NXC5 875 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 FNIP2Q9P278 1114 aa10.46□□□□□ -0.73
SMARCE1-210ENST00000481231 DOCK6Q96HP0 2047 aa10.46□□□□□ -0.74
SMARCE1-210ENST00000481231 MAST4O15021 2626 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 MAN2B1O00754 1011 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 PFKFB2O60825 505 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 SLITRK3O94933 977 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 LYPLA2O95372 231 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 CTDNEP1O95476 244 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 HNRNPA1P09651 372 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 XBP1P17861 261 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 ARF4P18085 180 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 AXLP30530 894 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 CNR2P34972 360 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 NR5A1Q13285 461 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 CAPSQ13938 189 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 SLC5A9Q2M3M2 681 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 USP41Q3LFD5 358 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 PABPC1LQ4VXU2 614 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 RTP2Q5QGT7 225 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 RNF43Q68DV7 783 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 KIAA1211LQ6NV74 962 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 FUT10Q6P4F1 479 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 IFNLR1Q8IU57 520 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 SLFN12Q8IYM2 578 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 SLC7A14Q8TBB6 771 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 FAM3CQ92520 227 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 DNASE1L2Q92874 299 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 NAP1L4Q99733 375 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 HSD17B14Q9BPX1 270 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 EIF2AK1Q9BQI3 630 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 IER2Q9BTL4 223 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 BRD9Q9H8M2 597 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 DNMT3BQ9UBC3 853 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 CACNG4Q9UBN1 327 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 TPCN1Q9ULQ1 816 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 GIT1Q9Y2X7 761 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 PIAS3Q9Y6X2 628 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 LAMA5O15230 3695 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 LAMA1P25391 3075 aa10.45□□□□□ -0.74
SMARCE1-210ENST00000481231 FREM2Q5SZK8 3169 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 ADAM12O43184 909 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 B4GALT5O43286 388 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 XYLBO75191 536 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 NR1I2O75469 434 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 DGAT1O75907 488 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 EPN2O95208 641 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 BAG4O95429 457 aaKnown RBP10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 C1RP00736 705 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 CHRNB1P11230 501 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 CEBPBP17676 345 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 GLRA2P23416 452 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 FCARP24071 287 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 AKAP5P24588 427 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 ARL2P36404 184 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 POU5F1BQ06416 359 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 NCBP1Q09161 790 aaKnown RBP10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 TFDP1Q14186 410 aa10.44□□□□□ -0.74
SMARCE1-210ENST00000481231 SH3PXD2AQ5TCZ1 1133 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms