RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 PRDX5P30044 214 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 ALDH5A1P51649 535 aaPredicted RBP6.5□□□□□ -1.37
UPF3A-207ENST00000481131 GJA9P57773 515 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 APBA1Q02410 837 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 KIAA2012Q0VF49 1180 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 DUSP8Q13202 625 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 FGL2Q14314 439 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 ZNF568Q3ZCX4 644 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 FLYWCH1Q4VC44 716 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 NT5DC1Q5TFE4 455 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 FAM90A1Q86YD7 464 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 KRT78Q8N1N4 520 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 SYT8Q8NBV8 401 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 IL31RAQ8NI17 732 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 SLC35B2Q8TB61 432 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 ZSCAN18Q8TBC5 510 aaPredicted RBP6.5□□□□□ -1.37
UPF3A-207ENST00000481131 IL17RAQ96F46 866 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 KRTAP4-11Q9BYQ6 195 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 KLHL11Q9NVR0 708 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 PCDHA1Q9Y5I3 950 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 NESP48681 1621 aa6.5□□□□□ -1.37
UPF3A-207ENST00000481131 MYF5P13349 255 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 NPR1P16066 1061 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 SMARCA1P28370 1054 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 KCNC1P48547 511 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 FLT3LGP49771 235 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 NPEPPSP55786 919 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 RAC3P60763 192 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 FAM47AQ5JRC9 791 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 CIAPIN1Q6FI81 312 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 OTUD7BQ6GQQ9 843 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 PDZD4Q76G19 769 aaPredicted RBP6.49□□□□□ -1.37
UPF3A-207ENST00000481131 C11orf96Q7Z7L8 435 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 FAM124AQ86V42 546 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 SHCBP1Q8NEM2 672 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 ANKS1AQ92625 1134 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 MTFMTQ96DP5 389 aaKnown RBP6.49□□□□□ -1.37
UPF3A-207ENST00000481131 MRGPRX1Q96LB2 322 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 ELAC2Q9BQ52 826 aaKnown RBP6.49□□□□□ -1.37
UPF3A-207ENST00000481131 C1orf43Q9BWL3 253 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 MEGF9Q9H1U4 602 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 RTEL1Q9NZ71 1219 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 MOCS1Q9NZB8 636 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 FNIP2Q9P278 1114 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 OAZ3Q9UMX2 235 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 RIPOR2Q9Y4F9 1068 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 COMMD10Q9Y6G5 202 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 USP19O94966 1318 aa6.49□□□□□ -1.37
UPF3A-207ENST00000481131 CXorf49A8MYA2 514 aaPredicted RBP6.48□□□□□ -1.37
UPF3A-207ENST00000481131 FRS3O43559 492 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 TRIM13O60858 407 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 LDHAP00338 332 aaKnown RBP6.48□□□□□ -1.37
UPF3A-207ENST00000481131 AHSGP02765 367 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 RAP2AP10114 183 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 PIK3CBP42338 1070 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 HTR3AP46098 478 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 TM4SF4P48230 202 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 POLD3Q15054 466 aaPredicted RBP6.48□□□□□ -1.37
UPF3A-207ENST00000481131 LONRF1Q17RB8 773 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 ANKS6Q68DC2 871 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 BORAQ6PGQ7 559 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 FRMD5Q7Z6J6 570 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 MORC1Q86VD1 984 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 SPICE1Q8N0Z3 855 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 GJA10Q969M2 543 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 TBCBQ99426 244 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 C11orf54Q9H0W9 315 aaPredicted RBP6.48□□□□□ -1.37
UPF3A-207ENST00000481131 MRPL46Q9H2W6 279 aaKnown RBP6.48□□□□□ -1.37
UPF3A-207ENST00000481131 WDCPQ9H6R7 721 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 RSAD1Q9HA92 442 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 FEZ2Q9UHY8 353 aaPredicted RBP6.48□□□□□ -1.37
UPF3A-207ENST00000481131 TAGLN3Q9UI15 199 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 CPA4Q9UI42 421 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 PCDHA6Q9UN73 950 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 KIF21AQ7Z4S6 1674 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 PNPLA7Q6ZV29 1317 aa6.48□□□□□ -1.37
UPF3A-207ENST00000481131 A0A1W2PRX2 142 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 PRSS29PA6NIE9 313 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 MYO1FO00160 1098 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 GRM6O15303 877 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 PHGDHO43175 533 aaKnown RBP6.47□□□□□ -1.37
UPF3A-207ENST00000481131 HOXA3O43365 443 aaPredicted RBP6.47□□□□□ -1.37
UPF3A-207ENST00000481131 MGEA5O60502 916 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 FTH1P19P0C7X4 201 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 KITP10721 976 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 SLC6A4P31645 630 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 PPP2CBP62714 309 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 PPP2CAP67775 309 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 CSRP2Q16527 193 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 DACT2Q5SW24 774 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 SEM1Q6ZVN7 128 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 APIPQ96GX9 242 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 LRRC37BQ96QE4 947 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 TCF25Q9BQ70 676 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 MRI1Q9BV20 369 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 C12orf65Q9H3J6 166 aaKnown RBP6.47□□□□□ -1.37
UPF3A-207ENST00000481131 DUSP10Q9Y6W6 482 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 PRDM2Q13029 1718 aa6.47□□□□□ -1.37
UPF3A-207ENST00000481131 TCRBV7S2A1N4TA0A589 114 aa6.46□□□□□ -1.38
UPF3A-207ENST00000481131 TEX33O43247 280 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms