RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 ATP6V0A1Q93050 837 aa7.42□□□□□ -1.22
LRCH3-216ENST00000481048 CCDC120Q96HB5 630 aa7.42□□□□□ -1.22
LRCH3-216ENST00000481048 SAMD11Q96NU1 681 aa7.42□□□□□ -1.22
LRCH3-216ENST00000481048 INPP4AQ96PE3 977 aaPredicted RBP7.42□□□□□ -1.22
LRCH3-216ENST00000481048 PIGSQ96S52 555 aa7.42□□□□□ -1.22
LRCH3-216ENST00000481048 SPZ1Q9BXG8 430 aa7.42□□□□□ -1.22
LRCH3-216ENST00000481048 C1QTNF1Q9BXJ1 281 aa7.42□□□□□ -1.22
LRCH3-216ENST00000481048 KRTAP4-2Q9BYR5 136 aa7.42□□□□□ -1.22
LRCH3-216ENST00000481048 IL25Q9H293 177 aa7.42□□□□□ -1.22
LRCH3-216ENST00000481048 NSUN3Q9H649 340 aaKnown RBP7.42□□□□□ -1.22
LRCH3-216ENST00000481048 FRMPD4Q14CM0 1322 aa7.42□□□□□ -1.22
LRCH3-216ENST00000481048 RALGAPA2Q2PPJ7 1873 aa7.42□□□□□ -1.22
LRCH3-216ENST00000481048 C17orf102A2RUQ5 167 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 EPOPA6NHQ4 379 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 E7EWF7 191 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 RFXAPO00287 272 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 NOP56O00567 594 aaKnown RBP7.41□□□□□ -1.22
LRCH3-216ENST00000481048 MAFGO15525 162 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 SGSM2O43147 1006 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 FIBPO43427 364 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 LPXNO60711 386 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 DDAH1O94760 285 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 AMHP03971 560 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 KRT1P04264 644 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 RPLP2P05387 115 aaKnown RBP7.41□□□□□ -1.22
LRCH3-216ENST00000481048 ZNF286BP0CG31 522 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 ZSCAN22P10073 491 aaPredicted RBP7.41□□□□□ -1.22
LRCH3-216ENST00000481048 GSPT1P15170 499 aaKnown RBP7.41□□□□□ -1.22
LRCH3-216ENST00000481048 UBA1P22314 1058 aaKnown RBP7.41□□□□□ -1.22
LRCH3-216ENST00000481048 HOXA13P31271 388 aaPredicted RBP7.41□□□□□ -1.22
LRCH3-216ENST00000481048 DEFB103AP81534 67 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 PTH1RQ03431 593 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 PLEKHG4Q58EX7 1191 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 WIPI1Q5MNZ9 446 aaPredicted RBP7.41□□□□□ -1.22
LRCH3-216ENST00000481048 ZNF746Q6NUN9 644 aaPredicted RBP7.41□□□□□ -1.22
LRCH3-216ENST00000481048 FAM43BQ6ZT52 329 aaPredicted RBP7.41□□□□□ -1.22
LRCH3-216ENST00000481048 RPAINQ86UA6 219 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 NLRX1Q86UT6 975 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 HID1Q8IV36 788 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 FBXO15Q8NCQ5 510 aaPredicted RBP7.41□□□□□ -1.22
LRCH3-216ENST00000481048 CTCFLQ8NI51 663 aaPredicted RBP7.41□□□□□ -1.22
LRCH3-216ENST00000481048 PPP1R13LQ8WUF5 828 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 APBB2Q92870 758 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 CUL5Q93034 780 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 RRP36Q96EU6 259 aaKnown RBP7.41□□□□□ -1.22
LRCH3-216ENST00000481048 CDHR1Q96JP9 859 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 TMEM87BQ96K49 555 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 ALPK1Q96QP1 1244 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 RNPEPQ9H4A4 650 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 CERS4Q9HA82 394 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 SLAMF8Q9P0V8 285 aa7.41□□□□□ -1.22
LRCH3-216ENST00000481048 ZNF215Q9UL58 517 aaPredicted RBP7.41□□□□□ -1.22
LRCH3-216ENST00000481048 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.4□□□□□ -1.22
LRCH3-216ENST00000481048 LINC01553A4QN01 128 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 KRTAP9-7A8MTY7 169 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 LGALS2P05162 132 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 USP17L7P0C7H9 530 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 SMIM10L2AP0DMW4 78 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 SMIM10L2BP0DMW5 78 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 CALM1P0DP23 149 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 CALM2P0DP24 149 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 CALM3P0DP25 149 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 THPOP40225 353 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 LIFRP42702 1097 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 ADAM17P78536 824 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 MRPS9P82933 396 aaKnown RBP7.4□□□□□ -1.22
LRCH3-216ENST00000481048 HTRA4P83105 476 aaPredicted RBP7.4□□□□□ -1.22
LRCH3-216ENST00000481048 ZNF200P98182 395 aaPredicted RBP7.4□□□□□ -1.22
LRCH3-216ENST00000481048 TFF2Q03403 129 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 SLC35G1Q2M3R5 365 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 PRAMEF13Q5VWM6 474 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 CASC1Q6TDU7 716 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 THAP5Q7Z6K1 395 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 DBF4BQ8NFT6 615 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 IL31RAQ8NI17 732 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 SMARCC2Q8TAQ2 1214 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 SEPT8Q92599 483 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 TNPO1Q92973 898 aaKnown RBP7.4□□□□□ -1.22
LRCH3-216ENST00000481048 TOP1MTQ969P6 601 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 GAL3ST3Q96A11 431 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 GPR20Q99678 358 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 C12orf49Q9H741 205 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 FAM8A1Q9UBU6 413 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 SEC63Q9UGP8 760 aaKnown RBP7.4□□□□□ -1.22
LRCH3-216ENST00000481048 NRCAMQ92823 1304 aa7.4□□□□□ -1.22
LRCH3-216ENST00000481048 WDR81Q562E7 1941 aa7.4□□□□□ -1.23
LRCH3-216ENST00000481048 COL4A4P53420 1690 aaPredicted RBP7.39□□□□□ -1.23
LRCH3-216ENST00000481048 LCHNA4D1U4 455 aa7.39□□□□□ -1.23
LRCH3-216ENST00000481048 RBAK-RBAKDNI3L0D1 243 aa7.39□□□□□ -1.23
LRCH3-216ENST00000481048 MEIS2O14770 477 aa7.39□□□□□ -1.23
LRCH3-216ENST00000481048 MCM5P33992 734 aa7.39□□□□□ -1.23
LRCH3-216ENST00000481048 PTPROQ16827 1216 aa7.39□□□□□ -1.23
LRCH3-216ENST00000481048 TAF2Q6P1X5 1199 aa7.39□□□□□ -1.23
LRCH3-216ENST00000481048 SV2BQ7L1I2 683 aa7.39□□□□□ -1.23
LRCH3-216ENST00000481048 RSPH3Q86UC2 560 aa7.39□□□□□ -1.23
LRCH3-216ENST00000481048 MB21D2Q8IYB1 491 aaPredicted RBP7.39□□□□□ -1.23
LRCH3-216ENST00000481048 ZNF654Q8IZM8 581 aa7.39□□□□□ -1.23
LRCH3-216ENST00000481048 SEPT1Q8WYJ6 367 aa7.39□□□□□ -1.23
LRCH3-216ENST00000481048 GPRASP2Q96D09 838 aa7.39□□□□□ -1.23
LRCH3-216ENST00000481048 PSTPIP2Q9H939 334 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms