RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CCDC73Q6ZRK6 1079 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 GPBP1Q86WP2 473 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 CEP57Q86XR8 500 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 APPL2Q8NEU8 664 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 SMG7Q92540 1137 aaKnown RBP12.51□□□□□ -0.41
CCM2-213ENST00000480658 RAD54LQ92698 747 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 PNMA5Q96PV4 448 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 TARS2Q9BW92 718 aaKnown RBP12.51□□□□□ -0.41
CCM2-213ENST00000480658 BACH2Q9BYV9 841 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 PRKD2Q9BZL6 878 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 LRRC27Q9C0I9 530 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 MTRRQ9UBK8 725 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 FBXW11Q9UKB1 542 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 TTLL13PA6NNM8 815 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 K7ENM7 598 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 TRAK2O60296 914 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 PIGRP01833 764 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 PLCG1P19174 1290 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 CYP3A5P20815 502 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 FGFR3P22607 806 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 DDIT3P35638 169 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 CLCNKBP51801 687 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 PTPN5P54829 565 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 TDGQ13569 410 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 ALCAMQ13740 583 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 RAB33AQ14088 237 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 PPM1LQ5SGD2 360 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 SLFN12LQ6IEE8 588 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 LILRA6Q6PI73 481 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 TAS1R1Q7RTX1 841 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 KCNK18Q7Z418 384 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 HAUS6Q7Z4H7 955 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 MYCT1Q8N699 235 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 C12orf76Q8N812 135 aaPredicted RBP12.5□□□□□ -0.41
CCM2-213ENST00000480658 LNX1Q8TBB1 728 aaPredicted RBP12.5□□□□□ -0.41
CCM2-213ENST00000480658 REEP2Q9BRK0 252 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 ST6GALNAC4Q9H4F1 302 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 EPS15L1Q9UBC2 864 aa12.5□□□□□ -0.41
CCM2-213ENST00000480658 SRPRBQ9Y5M8 271 aaKnown RBP12.5□□□□□ -0.41
CCM2-213ENST00000480658 PODXLO00592 558 aa12.49□□□□□ -0.41
CCM2-213ENST00000480658 HSP90AA1P07900 732 aaKnown RBP12.49□□□□□ -0.41
CCM2-213ENST00000480658 GAP43P17677 238 aa12.49□□□□□ -0.41
CCM2-213ENST00000480658 SYT1P21579 422 aa12.49□□□□□ -0.41
CCM2-213ENST00000480658 GBP2P32456 591 aaPredicted RBP12.49□□□□□ -0.41
CCM2-213ENST00000480658 RAD51AP2Q09MP3 1159 aa12.49□□□□□ -0.41
CCM2-213ENST00000480658 GLRA4Q5JXX5 417 aa12.49□□□□□ -0.41
CCM2-213ENST00000480658 ZNF280DQ6N043 979 aa12.49□□□□□ -0.41
CCM2-213ENST00000480658 STXBP4Q6ZWJ1 553 aa12.49□□□□□ -0.41
CCM2-213ENST00000480658 MTSS1LQ765P7 747 aa12.49□□□□□ -0.41
CCM2-213ENST00000480658 PALB2Q86YC2 1186 aa12.49□□□□□ -0.41
CCM2-213ENST00000480658 HSCBQ8IWL3 235 aa12.49□□□□□ -0.41
CCM2-213ENST00000480658 HASPINQ8TF76 798 aa12.49□□□□□ -0.41
CCM2-213ENST00000480658 MFSD1Q9H3U5 465 aa12.49□□□□□ -0.41
CCM2-213ENST00000480658 TBX20Q9UMR3 447 aa12.49□□□□□ -0.41
CCM2-213ENST00000480658 UBQLN1Q9UMX0 589 aaKnown RBP12.49□□□□□ -0.41
CCM2-213ENST00000480658 DUSP12Q9UNI6 340 aa12.49□□□□□ -0.41
CCM2-213ENST00000480658 EXOC7Q9UPT5 735 aa12.49□□□□□ -0.41
CCM2-213ENST00000480658 DERAQ9Y315 318 aa12.49□□□□□ -0.41
CCM2-213ENST00000480658 OGTO15294 1046 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 STX6O43752 255 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 EDN1P05305 212 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 C8AP07357 584 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 SP100P23497 879 aaPredicted RBP12.48□□□□□ -0.41
CCM2-213ENST00000480658 ELF1P32519 619 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 OSTNP61366 133 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 POSTNQ15063 836 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 RRAGBQ5VZM2 374 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 TPGS2Q68CL5 300 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 SLC8B1Q6J4K2 584 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 SV2BQ7L1I2 683 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 TAS1R3Q7RTX0 852 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 MAP4K3Q8IVH8 894 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 ELMOD1Q8N336 334 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 ZNF461Q8TAF7 563 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 SNX21Q969T3 373 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 ASIC4Q96FT7 647 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 ZNF396Q96N95 335 aaPredicted RBP12.48□□□□□ -0.41
CCM2-213ENST00000480658 CLSTN3Q9BQT9 956 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 PAAF1Q9BRP4 392 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 PYM1Q9BRP8 204 aaKnown RBP12.48□□□□□ -0.41
CCM2-213ENST00000480658 CUEDC2Q9H467 287 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 KCNH3Q9ULD8 1083 aa12.48□□□□□ -0.41
CCM2-213ENST00000480658 SFI1A8K8P3 1242 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 F8W810 466 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 ABLIM1O14639 778 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 WEE2P0C1S8 567 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 HARSP12081 509 aaKnown RBP12.47□□□□□ -0.41
CCM2-213ENST00000480658 MARCKSP29966 332 aaPredicted RBP12.47□□□□□ -0.41
CCM2-213ENST00000480658 MCM4P33991 863 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 GTF2BQ00403 316 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 KARSQ15046 597 aaKnown RBP12.47□□□□□ -0.41
CCM2-213ENST00000480658 ARSHQ5FYA8 562 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 AXDND1Q5T1B0 1012 aaPredicted RBP12.47□□□□□ -0.41
CCM2-213ENST00000480658 ATL3Q6DD88 541 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 PRSS55Q6UWB4 352 aaPredicted RBP12.47□□□□□ -0.41
CCM2-213ENST00000480658 NT5DC4Q86YG4 428 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 LEMD2Q8NC56 503 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 SUSD3Q96L08 255 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 B3GALT6Q96L58 329 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 PLIN2Q99541 437 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 333.2 ms