RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 PSMA7O14818 248 aa21.44■■□□□ 1.02
LIME1-205ENST00000480139 LPXNO60711 386 aa21.44■■□□□ 1.02
LIME1-205ENST00000480139 FGF18O76093 207 aa21.44■■□□□ 1.02
LIME1-205ENST00000480139 NR3C1P04150 777 aa21.44■■□□□ 1.02
LIME1-205ENST00000480139 CYP3A5P20815 502 aa21.44■■□□□ 1.02
LIME1-205ENST00000480139 CYP2J2P51589 502 aa21.44■■□□□ 1.02
LIME1-205ENST00000480139 GPM6BQ13491 265 aa21.44■■□□□ 1.02
LIME1-205ENST00000480139 SNRNP35Q16560 246 aaKnown RBP21.44■■□□□ 1.02
LIME1-205ENST00000480139 DHTKD1Q96HY7 919 aaPredicted RBP21.44■■□□□ 1.02
LIME1-205ENST00000480139 IGSF21Q96ID5 467 aa21.44■■□□□ 1.02
LIME1-205ENST00000480139 FAM161BQ96MY7 647 aa21.44■■□□□ 1.02
LIME1-205ENST00000480139 STK39Q9UEW8 545 aa21.44■■□□□ 1.02
LIME1-205ENST00000480139 FAN1Q9Y2M0 1017 aa21.44■■□□□ 1.02
LIME1-205ENST00000480139 GOLGA8IPA6NC78 632 aa21.43■■□□□ 1.02
LIME1-205ENST00000480139 GOLGA8JA6NMD2 632 aa21.43■■□□□ 1.02
LIME1-205ENST00000480139 XPOTO43592 962 aaKnown RBP21.43■■□□□ 1.02
LIME1-205ENST00000480139 ITGB1P05556 798 aa21.43■■□□□ 1.02
LIME1-205ENST00000480139 POU3F3P20264 500 aaPredicted RBP21.43■■□□□ 1.02
LIME1-205ENST00000480139 PBX3P40426 434 aa21.43■■□□□ 1.02
LIME1-205ENST00000480139 ISM2Q6H9L7 571 aa21.43■■□□□ 1.02
LIME1-205ENST00000480139 FOXR2Q6PJQ5 311 aa21.43■■□□□ 1.02
LIME1-205ENST00000480139 CBWD2Q8IUF1 395 aa21.43■■□□□ 1.02
LIME1-205ENST00000480139 GDPD5Q8WTR4 605 aa21.43■■□□□ 1.02
LIME1-205ENST00000480139 GUCD1Q96NT3 240 aa21.43■■□□□ 1.02
LIME1-205ENST00000480139 LMCD1Q9NZU5 365 aa21.43■■□□□ 1.02
LIME1-205ENST00000480139 UBQLN1Q9UMX0 589 aaKnown RBP21.43■■□□□ 1.02
LIME1-205ENST00000480139 PPP1R3GB7ZBB8 358 aa21.42■■□□□ 1.02
LIME1-205ENST00000480139 TMEM189-UBE2V1I3L0A0 370 aa21.42■■□□□ 1.02
LIME1-205ENST00000480139 MAPK13O15264 365 aa21.42■■□□□ 1.02
LIME1-205ENST00000480139 EXOC3O60645 756 aa21.42■■□□□ 1.02
LIME1-205ENST00000480139 CD44P16070 742 aaKnown RBP21.42■■□□□ 1.02
LIME1-205ENST00000480139 RPL13P26373 211 aaKnown RBP21.42■■□□□ 1.02
LIME1-205ENST00000480139 OR1G1P47890 313 aa21.42■■□□□ 1.02
LIME1-205ENST00000480139 KRT17Q04695 432 aa21.42■■□□□ 1.02
LIME1-205ENST00000480139 LRRC63Q05C16 580 aa21.42■■□□□ 1.02
LIME1-205ENST00000480139 SOX4Q06945 474 aaPredicted RBP21.42■■□□□ 1.02
LIME1-205ENST00000480139 TMEM132DQ14C87 1099 aa21.42■■□□□ 1.02
LIME1-205ENST00000480139 SURF1Q15526 300 aa21.42■■□□□ 1.02
LIME1-205ENST00000480139 SPPL3Q8TCT6 385 aa21.42■■□□□ 1.02
LIME1-205ENST00000480139 KIF12Q96FN5 646 aa21.42■■□□□ 1.02
LIME1-205ENST00000480139 DDX27Q96GQ7 796 aaKnown RBP21.42■■□□□ 1.02
LIME1-205ENST00000480139 TMEM169Q96HH4 297 aa21.42■■□□□ 1.02
LIME1-205ENST00000480139 CDX2Q99626 313 aaPredicted RBP21.42■■□□□ 1.02
LIME1-205ENST00000480139 COLEC11Q9BWP8 271 aa21.42■■□□□ 1.02
LIME1-205ENST00000480139 MARCH5Q9NX47 278 aa21.42■■□□□ 1.02
LIME1-205ENST00000480139 CASTOR2A6NHX0 329 aa21.41■■□□□ 1.02
LIME1-205ENST00000480139 NT5C1B-RDH14C9J2C7 533 aa21.41■■□□□ 1.02
LIME1-205ENST00000480139 NR2F2P24468 414 aa21.41■■□□□ 1.02
LIME1-205ENST00000480139 CCNE1P24864 410 aa21.41■■□□□ 1.02
LIME1-205ENST00000480139 RPL9P32969 192 aaKnown RBP21.41■■□□□ 1.02
LIME1-205ENST00000480139 UPP1Q16831 310 aa21.41■■□□□ 1.02
LIME1-205ENST00000480139 CCDC183Q5T5S1 534 aa21.41■■□□□ 1.02
LIME1-205ENST00000480139 SPATA1Q5VX52 437 aa21.41■■□□□ 1.02
LIME1-205ENST00000480139 JADE1Q6IE81 842 aa21.41■■□□□ 1.02
LIME1-205ENST00000480139 TMEM173Q86WV6 379 aaPredicted RBP21.41■■□□□ 1.02
LIME1-205ENST00000480139 C18orf25Q96B23 403 aaPredicted RBP21.41■■□□□ 1.02
LIME1-205ENST00000480139 FAM212AQ96EL1 285 aa21.41■■□□□ 1.02
LIME1-205ENST00000480139 GAS2L1Q99501 681 aaPredicted RBP21.41■■□□□ 1.02
LIME1-205ENST00000480139 TSG101Q99816 390 aa21.41■■□□□ 1.02
LIME1-205ENST00000480139 ATG2AQ2TAZ0 1938 aa21.41■■□□□ 1.02
LIME1-205ENST00000480139 MYO9BQ13459 2157 aa21.4■■□□□ 1.02
LIME1-205ENST00000480139 RFXAPO00287 272 aa21.4■■□□□ 1.02
LIME1-205ENST00000480139 GRM6O15303 877 aa21.4■■□□□ 1.02
LIME1-205ENST00000480139 EFEMP2O95967 443 aa21.4■■□□□ 1.02
LIME1-205ENST00000480139 NFICP08651 508 aa21.4■■□□□ 1.02
LIME1-205ENST00000480139 LRPAP1P30533 357 aa21.4■■□□□ 1.02
LIME1-205ENST00000480139 SPAG1Q07617 926 aa21.4■■□□□ 1.02
LIME1-205ENST00000480139 CYP24A1Q07973 514 aa21.4■■□□□ 1.02
LIME1-205ENST00000480139 PSMD6Q15008 389 aa21.4■■□□□ 1.02
LIME1-205ENST00000480139 PTPROQ16827 1216 aa21.4■■□□□ 1.02
LIME1-205ENST00000480139 KLHL40Q2TBA0 621 aa21.4■■□□□ 1.02
LIME1-205ENST00000480139 DDX53Q86TM3 631 aaKnown RBP21.4■■□□□ 1.02
LIME1-205ENST00000480139 ZC3H3Q8IXZ2 948 aaKnown RBP21.4■■□□□ 1.02
LIME1-205ENST00000480139 MLKLQ8NB16 471 aa21.4■■□□□ 1.02
LIME1-205ENST00000480139 BEST2Q8NFU1 509 aa21.4■■□□□ 1.02
LIME1-205ENST00000480139 NOC3LQ8WTT2 800 aaKnown RBP21.4■■□□□ 1.02
LIME1-205ENST00000480139 BCL7CQ8WUZ0 217 aaPredicted RBP21.4■■□□□ 1.02
LIME1-205ENST00000480139 MFSD14AQ96MC6 490 aa21.4■■□□□ 1.02
LIME1-205ENST00000480139 PAAF1Q9BRP4 392 aa21.4■■□□□ 1.02
LIME1-205ENST00000480139 ALG13Q9NP73 1137 aaKnown RBP21.4■■□□□ 1.02
LIME1-205ENST00000480139 TUBGCP4Q9UGJ1 667 aa21.4■■□□□ 1.02
LIME1-205ENST00000480139 PUF60Q9UHX1 559 aaKnown RBP21.4■■□□□ 1.02
LIME1-205ENST00000480139 ADAM28Q9UKQ2 775 aa21.4■■□□□ 1.02
LIME1-205ENST00000480139 FRMD4BQ9Y2L6 1034 aa21.4■■□□□ 1.02
LIME1-205ENST00000480139 PRG3Q9Y2Y8 225 aaPredicted RBP21.4■■□□□ 1.02
LIME1-205ENST00000480139 CLCNKBP51801 687 aa21.39■■□□□ 1.01
LIME1-205ENST00000480139 WNT7BP56706 349 aa21.39■■□□□ 1.01
LIME1-205ENST00000480139 ADGRE1Q14246 886 aa21.39■■□□□ 1.01
LIME1-205ENST00000480139 ANKRD40Q6AI12 368 aa21.39■■□□□ 1.01
LIME1-205ENST00000480139 DCLRE1AQ6PJP8 1040 aa21.39■■□□□ 1.01
LIME1-205ENST00000480139 EFCAB13Q8IY85 973 aa21.39■■□□□ 1.01
LIME1-205ENST00000480139 POF1BQ8WVV4 589 aa21.39■■□□□ 1.01
LIME1-205ENST00000480139 MRPL38Q96DV4 380 aaKnown RBP21.39■■□□□ 1.01
LIME1-205ENST00000480139 MKNK1Q9BUB5 465 aa21.39■■□□□ 1.01
LIME1-205ENST00000480139 GOLGA2P5Q9HBQ8 144 aa21.39■■□□□ 1.01
LIME1-205ENST00000480139 PDE11AQ9HCR9 933 aa21.39■■□□□ 1.01
LIME1-205ENST00000480139 BICDL2A1A5D9 508 aa21.38■■□□□ 1.01
LIME1-205ENST00000480139 KIF4AO95239 1232 aa21.38■■□□□ 1.01
LIME1-205ENST00000480139 DNAJB1P25685 340 aa21.38■■□□□ 1.01
LIME1-205ENST00000480139 PMS1P54277 932 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms