RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 GPRC5CQ9NQ84 441 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 XPNPEP1Q9NQW7 623 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 ZSCAN32Q9NX65 697 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 CACNG4Q9UBN1 327 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 ADAM28Q9UKQ2 775 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 SMG5Q9UPR3 1016 aaKnown RBP7.8□□□□□ -1.16
COL17A1-205ENST00000480127 DNM3Q9UQ16 869 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 PATJQ8NI35 1801 aa7.8□□□□□ -1.16
COL17A1-205ENST00000480127 MTCL1Q9Y4B5 1905 aaKnown RBP7.8□□□□□ -1.16
COL17A1-205ENST00000480127 CACNA1BQ00975 2339 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 DCDC2BA2VCK2 349 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 PRR5-ARHGAP8B1AHC4 643 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 K7ERI5 159 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 CCL16O15467 120 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 ADAM12O43184 909 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 MED24O75448 989 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 LYPLA2O95372 231 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 KRT18P05783 430 aaKnown RBP7.79□□□□□ -1.16
COL17A1-205ENST00000480127 THP07101 528 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 C8AP07357 584 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 HNRNPA1P09651 372 aaKnown RBP eCLIP7.79□□□□□ -1.16
COL17A1-205ENST00000480127 XRCC6P12956 609 aaKnown RBP eCLIP7.79□□□□□ -1.16
COL17A1-205ENST00000480127 TARSP26639 723 aaKnown RBP7.79□□□□□ -1.16
COL17A1-205ENST00000480127 HOXA9P31269 272 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 MAGEA9P43362 315 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 EFNA5P52803 228 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 ARHGAP8P85298 464 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 PFKPQ01813 784 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 LMNB2Q03252 620 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 SPIRE1Q08AE8 756 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 ELAVL2Q12926 359 aaKnown RBP7.79□□□□□ -1.16
COL17A1-205ENST00000480127 STRN3Q13033 797 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 ORC2Q13416 577 aaPredicted RBP7.79□□□□□ -1.16
COL17A1-205ENST00000480127 HSP90AA2PQ14568 343 aaPredicted RBP7.79□□□□□ -1.16
COL17A1-205ENST00000480127 DCAF4L1Q3SXM0 396 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 ZBTB41Q5SVQ8 909 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 POTEHQ6S545 545 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 DTHD1Q6ZMT9 781 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 CATSPER3Q86XQ3 398 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 LNX1Q8TBB1 728 aaPredicted RBP7.79□□□□□ -1.16
COL17A1-205ENST00000480127 DRC1Q96MC2 740 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 KXD1Q9BQD3 176 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 RTKNQ9BST9 563 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 POLR3CQ9BUI4 534 aaPredicted RBP7.79□□□□□ -1.16
COL17A1-205ENST00000480127 CCDC94Q9BW85 323 aaPredicted RBP7.79□□□□□ -1.16
COL17A1-205ENST00000480127 BHMT2Q9H2M3 363 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 PARD6AQ9NPB6 346 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 PRMT8Q9NR22 394 aaPredicted RBP7.79□□□□□ -1.16
COL17A1-205ENST00000480127 TOPORSQ9NS56 1045 aaPredicted RBP7.79□□□□□ -1.16
COL17A1-205ENST00000480127 DDX19AQ9NUU7 478 aaKnown RBP7.79□□□□□ -1.16
COL17A1-205ENST00000480127 DNMT3BQ9UBC3 853 aaKnown RBP7.79□□□□□ -1.16
COL17A1-205ENST00000480127 CDV3Q9UKY7 258 aaKnown RBP7.79□□□□□ -1.16
COL17A1-205ENST00000480127 KIAA1024Q9UPX6 916 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 MYH15Q9Y2K3 1946 aa7.79□□□□□ -1.16
COL17A1-205ENST00000480127 TRAPPC3O43617 180 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 TBC1D4O60343 1298 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 XYLBO75191 536 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 ADRB1P08588 477 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 POU2F2P09086 479 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 RPA1P27694 616 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 ELF1P32519 619 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 ARL2P36404 184 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 NAMPTP43490 491 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 RPS9P46781 194 aaKnown RBP7.78□□□□□ -1.16
COL17A1-205ENST00000480127 TRAPPC10P48553 1259 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 SMTNP53814 917 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 OSTNP61366 133 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 POU5F1BQ06416 359 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 TUSC3Q13454 348 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 RABEP1Q15276 862 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 ZNF568Q3ZCX4 644 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 PPM1LQ5SGD2 360 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 ATF7IP2Q5U623 682 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 FAM171A1Q5VUB5 890 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 PDXDC1Q6P996 788 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 TPRG1Q6ZUI0 275 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 NPAS3Q8IXF0 933 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 FBXO18Q8NFZ0 1043 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 PIK3R5Q8WYR1 880 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 TNFRSF25Q93038 417 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 SECISBP2LQ93073 1101 aaKnown RBP7.78□□□□□ -1.16
COL17A1-205ENST00000480127 NELL2Q99435 816 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 TTPALQ9BTX7 342 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 PLA2G2FQ9BZM2 168 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 TMEM60Q9H2L4 133 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 KMT5AQ9NQR1 393 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 HCFC1R1Q9NWW0 138 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 SNTG2Q9NY99 539 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 ANKFY1Q9P2R3 1169 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 USP18Q9UMW8 372 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 SMC3Q9UQE7 1217 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 NUB1Q9Y5A7 615 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 ZMYM2Q9UBW7 1377 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 FRYLO94915 3013 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 MIA3Q5JRA6 1907 aa7.78□□□□□ -1.16
COL17A1-205ENST00000480127 A0A1B0GUA9 196 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 PTGESO14684 152 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 RECQL4O94761 1208 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 B3GAT3O94766 335 aa7.77□□□□□ -1.17
COL17A1-205ENST00000480127 KIF4AO95239 1232 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms