RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 LGR5O75473 907 aa13.95□□□□□ -0.18
SEC13-216ENST00000479868 SRGAP2CP0DJJ0 459 aa13.95□□□□□ -0.18
SEC13-216ENST00000479868 UNGP13051 313 aaPredicted RBP13.95□□□□□ -0.18
SEC13-216ENST00000479868 ACO1P21399 889 aaKnown RBP13.95□□□□□ -0.18
SEC13-216ENST00000479868 GJA5P36382 358 aa13.95□□□□□ -0.18
SEC13-216ENST00000479868 TNFSF9P41273 254 aa13.95□□□□□ -0.18
SEC13-216ENST00000479868 LAMTOR4Q0VGL1 99 aa13.95□□□□□ -0.18
SEC13-216ENST00000479868 CUL1Q13616 776 aa13.95□□□□□ -0.18
SEC13-216ENST00000479868 ALS2CLQ60I27 953 aa13.95□□□□□ -0.18
SEC13-216ENST00000479868 MREGQ8N565 214 aa13.95□□□□□ -0.18
SEC13-216ENST00000479868 UBL4BQ8N7F7 174 aa13.95□□□□□ -0.18
SEC13-216ENST00000479868 FAM167AQ96KS9 214 aa13.95□□□□□ -0.18
SEC13-216ENST00000479868 SPATA33Q96N06 139 aa13.95□□□□□ -0.18
SEC13-216ENST00000479868 CGRRF1Q99675 332 aa13.95□□□□□ -0.18
SEC13-216ENST00000479868 SYT17Q9BSW7 474 aa13.95□□□□□ -0.18
SEC13-216ENST00000479868 CCDC113Q9H0I3 377 aa13.95□□□□□ -0.18
SEC13-216ENST00000479868 UMODL1Q5DID0 1318 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 CLDN3O15551 220 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 FAM189A1O60320 539 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 EPHX2P34913 555 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 PTENP60484 403 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 CCDC62Q6P9F0 684 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 USP50Q70EL3 339 aaPredicted RBP13.94□□□□□ -0.18
SEC13-216ENST00000479868 MAATS1Q7Z4T9 603 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 ZBTB33Q86T24 672 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 IQCKQ8N0W5 287 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 CCDC26Q8TAB7 109 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 PIK3R5Q8WYR1 880 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 FAM81BQ96LP2 452 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 MPHOSPH6Q99547 160 aaKnown RBP13.94□□□□□ -0.18
SEC13-216ENST00000479868 UVRAGQ9P2Y5 699 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 CNOT8Q9UFF9 292 aaKnown RBP13.94□□□□□ -0.18
SEC13-216ENST00000479868 PCDHB2Q9Y5E7 798 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 DAPK3O43293 454 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 OSBPP22059 807 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 CUL2Q13617 745 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 PLCB4Q15147 1175 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 IER5Q5VY09 327 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 KCNV1Q6PIU1 500 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 ZPBP2Q6X784 338 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 FASTKD5Q7L8L6 764 aaKnown RBP13.94□□□□□ -0.18
SEC13-216ENST00000479868 EIF1ADQ8N9N8 165 aaKnown RBP13.94□□□□□ -0.18
SEC13-216ENST00000479868 RNF149Q8NC42 400 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 ATP8B4Q8TF62 1192 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 TRAPPC12Q8WVT3 735 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 CPA5Q8WXQ8 436 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 NAP1L3Q99457 506 aaPredicted RBP13.94□□□□□ -0.18
SEC13-216ENST00000479868 TRIM51Q9BSJ1 452 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 PDGFCQ9NRA1 345 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 NUB1Q9Y5A7 615 aa13.94□□□□□ -0.18
SEC13-216ENST00000479868 IGKV6-21A0A0C4DH24 114 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 CFHP08603 1231 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 EFNA5P52803 228 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 C2CD6Q53TS8 623 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 CDCA2Q69YH5 1023 aaPredicted RBP13.93□□□□□ -0.18
SEC13-216ENST00000479868 ZDHHC14Q8IZN3 488 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 ZC3H15Q8WU90 426 aaKnown RBP13.93□□□□□ -0.18
SEC13-216ENST00000479868 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.93□□□□□ -0.18
SEC13-216ENST00000479868 SEC14L1Q92503 715 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 ARL8AQ96BM9 186 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 ZBTB10Q96DT7 871 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 L3MBTL3Q96JM7 780 aaPredicted RBP13.93□□□□□ -0.18
SEC13-216ENST00000479868 ZNF668Q96K58 619 aaPredicted RBP13.93□□□□□ -0.18
SEC13-216ENST00000479868 WNT8AQ9H1J5 351 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 EVPLQ92817 2033 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 GOLGA6CA6NDK9 693 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 SPOPO43791 374 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 TOM1L1O75674 476 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 KRT14P02533 472 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 GJB1P08034 283 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 GOLGA6DP0CG33 693 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 CYP2C8P10632 490 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 PYGMP11217 842 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 CTNNA1P35221 906 aaKnown RBP13.93□□□□□ -0.18
SEC13-216ENST00000479868 NOP14P78316 857 aaKnown RBP13.93□□□□□ -0.18
SEC13-216ENST00000479868 TTMPQ5BVD1 217 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 CFAP58Q5T655 872 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 DPY19L2Q6NUT2 758 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 LLGL2Q6P1M3 1020 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 TMEM270Q6UE05 265 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 PLPPR4Q7Z2D5 763 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 BRSK2Q8IWQ3 736 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 MCOLN2Q8IZK6 566 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 MORC4Q8TE76 937 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 CYFIP2Q96F07 1278 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 RUFY1Q96T51 708 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 ACO2Q99798 780 aaKnown RBP13.93□□□□□ -0.18
SEC13-216ENST00000479868 TCHPQ9BT92 498 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 MRPL4Q9BYD3 311 aaKnown RBP13.93□□□□□ -0.18
SEC13-216ENST00000479868 EFCC1Q9HA90 598 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 GOLGA6AQ9NYA3 693 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 PPME1Q9Y570 386 aa13.93□□□□□ -0.18
SEC13-216ENST00000479868 GOLGA6L10A0A0M3HER8 536 aa13.92□□□□□ -0.18
SEC13-216ENST00000479868 CLSTN1O94985 981 aa13.92□□□□□ -0.18
SEC13-216ENST00000479868 PRKCBP05771 671 aa13.92□□□□□ -0.18
SEC13-216ENST00000479868 CLTAP09496 248 aa13.92□□□□□ -0.18
SEC13-216ENST00000479868 TXNP10599 105 aaKnown RBP13.92□□□□□ -0.18
SEC13-216ENST00000479868 CAPN2P17655 700 aa13.92□□□□□ -0.18
SEC13-216ENST00000479868 SSTR3P32745 418 aaPredicted RBP13.92□□□□□ -0.18
SEC13-216ENST00000479868 FLT3P36888 993 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms