RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 PRG3Q9Y2Y8 225 aaPredicted RBP27.18■■□□□ 1.94
PERM1-203ENST00000479361 DERAQ9Y315 318 aa27.18■■□□□ 1.94
PERM1-203ENST00000479361 GOLGA8IPA6NC78 632 aa27.17■■□□□ 1.94
PERM1-203ENST00000479361 CASTOR2A6NHX0 329 aa27.17■■□□□ 1.94
PERM1-203ENST00000479361 ZNF233A6NK53 670 aa27.17■■□□□ 1.94
PERM1-203ENST00000479361 GOLGA8JA6NMD2 632 aa27.17■■□□□ 1.94
PERM1-203ENST00000479361 GRM6O15303 877 aa27.17■■□□□ 1.94
PERM1-203ENST00000479361 POU3F3P20264 500 aaPredicted RBP27.17■■□□□ 1.94
PERM1-203ENST00000479361 MCM4P33991 863 aa27.17■■□□□ 1.94
PERM1-203ENST00000479361 PRCPP42785 496 aa27.17■■□□□ 1.94
PERM1-203ENST00000479361 CYP2J2P51589 502 aa27.17■■□□□ 1.94
PERM1-203ENST00000479361 BRSK2Q8IWQ3 736 aa27.17■■□□□ 1.94
PERM1-203ENST00000479361 TRIML1Q8N9V2 468 aa27.17■■□□□ 1.94
PERM1-203ENST00000479361 TRAF3IP3Q9Y228 551 aa27.17■■□□□ 1.94
PERM1-203ENST00000479361 ADGRE1Q14246 886 aa27.16■■□□□ 1.94
PERM1-203ENST00000479361 MYBPC2Q14324 1141 aa27.16■■□□□ 1.94
PERM1-203ENST00000479361 ISM2Q6H9L7 571 aa27.16■■□□□ 1.94
PERM1-203ENST00000479361 SLC9A9Q8IVB4 645 aa27.16■■□□□ 1.94
PERM1-203ENST00000479361 POF1BQ8WVV4 589 aa27.16■■□□□ 1.94
PERM1-203ENST00000479361 MRPL38Q96DV4 380 aaKnown RBP27.16■■□□□ 1.94
PERM1-203ENST00000479361 DDX27Q96GQ7 796 aaKnown RBP27.16■■□□□ 1.94
PERM1-203ENST00000479361 FBXL18Q96ME1 805 aa27.16■■□□□ 1.94
PERM1-203ENST00000479361 UBQLN1Q9UMX0 589 aaKnown RBP27.16■■□□□ 1.94
PERM1-203ENST00000479361 MYO9BQ13459 2157 aa27.16■■□□□ 1.94
PERM1-203ENST00000479361 TRANK1O15050 2925 aa27.16■■□□□ 1.94
PERM1-203ENST00000479361 COL4A4P53420 1690 aaPredicted RBP27.15■■□□□ 1.94
PERM1-203ENST00000479361 BIN1O00499 593 aa27.15■■□□□ 1.94
PERM1-203ENST00000479361 EXOC3O60645 756 aa27.15■■□□□ 1.94
PERM1-203ENST00000479361 MORC3Q14149 939 aa27.15■■□□□ 1.94
PERM1-203ENST00000479361 TMEM132DQ14C87 1099 aa27.15■■□□□ 1.94
PERM1-203ENST00000479361 TMEM173Q86WV6 379 aaPredicted RBP27.15■■□□□ 1.94
PERM1-203ENST00000479361 ZSWIM2Q8NEG5 633 aa27.15■■□□□ 1.94
PERM1-203ENST00000479361 C2CD2Q9Y426 696 aa27.15■■□□□ 1.94
PERM1-203ENST00000479361 PSMA7O14818 248 aa27.14■■□□□ 1.94
PERM1-203ENST00000479361 NR3C1P04150 777 aa27.14■■□□□ 1.94
PERM1-203ENST00000479361 CYP3A5P20815 502 aa27.14■■□□□ 1.94
PERM1-203ENST00000479361 RPL13P26373 211 aaKnown RBP27.14■■□□□ 1.94
PERM1-203ENST00000479361 RPL9P32969 192 aaKnown RBP27.14■■□□□ 1.94
PERM1-203ENST00000479361 SPAG1Q07617 926 aa27.14■■□□□ 1.94
PERM1-203ENST00000479361 ZBTB6Q15916 424 aa27.14■■□□□ 1.94
PERM1-203ENST00000479361 SNRNP35Q16560 246 aaKnown RBP27.14■■□□□ 1.94
PERM1-203ENST00000479361 NFIL3Q16649 462 aa27.14■■□□□ 1.94
PERM1-203ENST00000479361 JADE1Q6IE81 842 aa27.14■■□□□ 1.94
PERM1-203ENST00000479361 DDX53Q86TM3 631 aaKnown RBP27.14■■□□□ 1.94
PERM1-203ENST00000479361 NT5DC4Q86YG4 428 aa27.14■■□□□ 1.94
PERM1-203ENST00000479361 CBWD2Q8IUF1 395 aa27.14■■□□□ 1.94
PERM1-203ENST00000479361 ADSSL1Q8N142 457 aa27.14■■□□□ 1.94
PERM1-203ENST00000479361 C18orf25Q96B23 403 aaPredicted RBP27.14■■□□□ 1.94
PERM1-203ENST00000479361 TLR9Q9NR96 1032 aa27.14■■□□□ 1.94
PERM1-203ENST00000479361 MARCH5Q9NX47 278 aa27.14■■□□□ 1.94
PERM1-203ENST00000479361 MTCH2Q9Y6C9 303 aa27.14■■□□□ 1.94
PERM1-203ENST00000479361 TULP1O00294 542 aaPredicted RBP27.13■■□□□ 1.93
PERM1-203ENST00000479361 TADA2AO75478 443 aa27.13■■□□□ 1.93
PERM1-203ENST00000479361 SOX4Q06945 474 aaPredicted RBP27.13■■□□□ 1.93
PERM1-203ENST00000479361 BMS1Q14692 1282 aaKnown RBP27.13■■□□□ 1.93
PERM1-203ENST00000479361 SURF1Q15526 300 aa27.13■■□□□ 1.93
PERM1-203ENST00000479361 UPP1Q16831 310 aa27.13■■□□□ 1.93
PERM1-203ENST00000479361 PDE12Q6L8Q7 609 aaKnown RBP27.13■■□□□ 1.93
PERM1-203ENST00000479361 BEST2Q8NFU1 509 aa27.13■■□□□ 1.93
PERM1-203ENST00000479361 BCL7CQ8WUZ0 217 aaPredicted RBP27.13■■□□□ 1.93
PERM1-203ENST00000479361 TSG101Q99816 390 aa27.13■■□□□ 1.93
PERM1-203ENST00000479361 PAAF1Q9BRP4 392 aa27.13■■□□□ 1.93
PERM1-203ENST00000479361 DMAC2Q9NW81 257 aa27.13■■□□□ 1.93
PERM1-203ENST00000479361 ADAM28Q9UKQ2 775 aa27.13■■□□□ 1.93
PERM1-203ENST00000479361 NFICP08651 508 aa27.12■■□□□ 1.93
PERM1-203ENST00000479361 DNAJB1P25685 340 aa27.12■■□□□ 1.93
PERM1-203ENST00000479361 CLCNKBP51801 687 aa27.12■■□□□ 1.93
PERM1-203ENST00000479361 EDRF1Q3B7T1 1238 aa27.12■■□□□ 1.93
PERM1-203ENST00000479361 DCLRE1AQ6PJP8 1040 aa27.12■■□□□ 1.93
PERM1-203ENST00000479361 RDH13Q8NBN7 331 aa27.12■■□□□ 1.93
PERM1-203ENST00000479361 RABGGTAQ92696 567 aa27.12■■□□□ 1.93
PERM1-203ENST00000479361 DHTKD1Q96HY7 919 aaPredicted RBP27.12■■□□□ 1.93
PERM1-203ENST00000479361 GOLGA2P5Q9HBQ8 144 aa27.12■■□□□ 1.93
PERM1-203ENST00000479361 CACNG4Q9UBN1 327 aa27.12■■□□□ 1.93
PERM1-203ENST00000479361 TUBGCP4Q9UGJ1 667 aa27.12■■□□□ 1.93
PERM1-203ENST00000479361 FRMD4BQ9Y2L6 1034 aa27.12■■□□□ 1.93
PERM1-203ENST00000479361 TRIP11Q15643 1979 aa27.11■■□□□ 1.93
PERM1-203ENST00000479361 TMEM189-UBE2V1I3L0A0 370 aa27.11■■□□□ 1.93
PERM1-203ENST00000479361 B3GAT3O94766 335 aa27.11■■□□□ 1.93
PERM1-203ENST00000479361 PTMSP20962 102 aa27.11■■□□□ 1.93
PERM1-203ENST00000479361 BMP6P22004 513 aa27.11■■□□□ 1.93
PERM1-203ENST00000479361 NR2F2P24468 414 aa27.11■■□□□ 1.93
PERM1-203ENST00000479361 ZCWPW2Q504Y3 356 aa27.11■■□□□ 1.93
PERM1-203ENST00000479361 TIGD5Q53EQ6 642 aa27.11■■□□□ 1.93
PERM1-203ENST00000479361 SPATA1Q5VX52 437 aa27.11■■□□□ 1.93
PERM1-203ENST00000479361 CENPPQ6IPU0 288 aa27.11■■□□□ 1.93
PERM1-203ENST00000479361 STXBP5LQ9Y2K9 1186 aa27.11■■□□□ 1.93
PERM1-203ENST00000479361 SF3B1O75533 1304 aaKnown RBP eCLIP27.11■■□□□ 1.93
PERM1-203ENST00000479361 PODXLO00592 558 aa27.1■■□□□ 1.93
PERM1-203ENST00000479361 KIF4AO95239 1232 aa27.1■■□□□ 1.93
PERM1-203ENST00000479361 LRRC63Q05C16 580 aa27.1■■□□□ 1.93
PERM1-203ENST00000479361 CAMK1Q14012 370 aa27.1■■□□□ 1.93
PERM1-203ENST00000479361 VPS52Q8N1B4 723 aa27.1■■□□□ 1.93
PERM1-203ENST00000479361 MICAL1Q8TDZ2 1067 aa27.1■■□□□ 1.93
PERM1-203ENST00000479361 CACTINQ8WUQ7 758 aaKnown RBP27.1■■□□□ 1.93
PERM1-203ENST00000479361 TCF25Q9BQ70 676 aa27.1■■□□□ 1.93
PERM1-203ENST00000479361 PDE11AQ9HCR9 933 aa27.1■■□□□ 1.93
PERM1-203ENST00000479361 NGRNQ9NPE2 291 aaKnown RBP27.1■■□□□ 1.93
PERM1-203ENST00000479361 ENTPD7Q9NQZ7 604 aa27.1■■□□□ 1.93
PERM1-203ENST00000479361 PLXNA4Q9HCM2 1894 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms