RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 OR1G1P47890 313 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 CYP2J2P51589 502 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 LRRC63Q05C16 580 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 SNRNP35Q16560 246 aaKnown RBP15.17■□□□□ 0.02
PCIF1-202ENST00000479348 GLRA4Q5JXX5 417 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 CCDC183Q5T5S1 534 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 RBM43Q6ZSC3 357 aaKnown RBP15.17■□□□□ 0.02
PCIF1-202ENST00000479348 MLKLQ8NB16 471 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 SYAP1Q96A49 352 aaPredicted RBP15.17■□□□□ 0.02
PCIF1-202ENST00000479348 FAM212AQ96EL1 285 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 KIF12Q96FN5 646 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 TMEM169Q96HH4 297 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 GAS2L1Q99501 681 aaPredicted RBP15.17■□□□□ 0.02
PCIF1-202ENST00000479348 CXCL16Q9H2A7 254 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 PRDM12Q9H4Q4 367 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 MTMR10Q9NXD2 777 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 LMCD1Q9NZU5 365 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 UBQLN1Q9UMX0 589 aaKnown RBP15.17■□□□□ 0.02
PCIF1-202ENST00000479348 FRMD4BQ9Y2L6 1034 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 TDRD15B5MCY1 1934 aaKnown RBP15.17■□□□□ 0.02
PCIF1-202ENST00000479348 NLRC5Q86WI3 1866 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 BICDL2A1A5D9 508 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 PPP1R3GB7ZBB8 358 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 MAPK13O15264 365 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 B4GALT3O60512 393 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 ITGB1P05556 798 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 NR2F2P24468 414 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 CCNE1P24864 410 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 TMEM132DQ14C87 1099 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 KLHL40Q2TBA0 621 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 CBWD2Q8IUF1 395 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 ZSWIM2Q8NEG5 633 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 BEST2Q8NFU1 509 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 SPPL3Q8TCT6 385 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 NOC3LQ8WTT2 800 aaKnown RBP15.17■□□□□ 0.02
PCIF1-202ENST00000479348 IGSF21Q96ID5 467 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 FAM161BQ96MY7 647 aa15.17■□□□□ 0.02
PCIF1-202ENST00000479348 EPOPA6NHQ4 379 aa15.16■□□□□ 0.02
PCIF1-202ENST00000479348 TMEM189-UBE2V1I3L0A0 370 aa15.16■□□□□ 0.02
PCIF1-202ENST00000479348 CD44P16070 742 aaKnown RBP15.16■□□□□ 0.02
PCIF1-202ENST00000479348 PAX3P23760 479 aa15.16■□□□□ 0.02
PCIF1-202ENST00000479348 PBX3P40426 434 aa15.16■□□□□ 0.02
PCIF1-202ENST00000479348 FKBP3Q00688 224 aaKnown RBP15.16■□□□□ 0.02
PCIF1-202ENST00000479348 ADAM9Q13443 819 aa15.16■□□□□ 0.02
PCIF1-202ENST00000479348 PSMD6Q15008 389 aa15.16■□□□□ 0.02
PCIF1-202ENST00000479348 PTPROQ16827 1216 aa15.16■□□□□ 0.02
PCIF1-202ENST00000479348 SKOR2Q2VWA4 1001 aaPredicted RBP15.16■□□□□ 0.02
PCIF1-202ENST00000479348 CT47A1Q5JQC4 288 aaPredicted RBP15.16■□□□□ 0.02
PCIF1-202ENST00000479348 SPATA1Q5VX52 437 aa15.16■□□□□ 0.02
PCIF1-202ENST00000479348 JADE1Q6IE81 842 aa15.16■□□□□ 0.02
PCIF1-202ENST00000479348 PDE12Q6L8Q7 609 aaKnown RBP15.16■□□□□ 0.02
PCIF1-202ENST00000479348 DCLRE1AQ6PJP8 1040 aa15.16■□□□□ 0.02
PCIF1-202ENST00000479348 Q7L0L9 218 aa15.16■□□□□ 0.02
PCIF1-202ENST00000479348 DDX53Q86TM3 631 aaKnown RBP15.16■□□□□ 0.02
PCIF1-202ENST00000479348 RDH13Q8NBN7 331 aa15.16■□□□□ 0.02
PCIF1-202ENST00000479348 CACTINQ8WUQ7 758 aaKnown RBP15.16■□□□□ 0.02
PCIF1-202ENST00000479348 MFSD14AQ96MC6 490 aa15.16■□□□□ 0.02
PCIF1-202ENST00000479348 CDX2Q99626 313 aaPredicted RBP15.16■□□□□ 0.02
PCIF1-202ENST00000479348 DACH1Q9UI36 760 aa15.16■□□□□ 0.02
PCIF1-202ENST00000479348 KIAA1671Q9BY89 1806 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 CASTOR2A6NHX0 329 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 NT5C1B-RDH14C9J2C7 533 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 CETN3O15182 167 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 LPXNO60711 386 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 LRPAP1P30533 357 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 PSMC2P35998 433 aaKnown RBP15.15■□□□□ 0.02
PCIF1-202ENST00000479348 NLRP12P59046 1061 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 SOX4Q06945 474 aaPredicted RBP15.15■□□□□ 0.02
PCIF1-202ENST00000479348 ENPEPQ07075 957 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 CYP24A1Q07973 514 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 PAK1Q13153 545 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 BMS1Q14692 1282 aaKnown RBP15.15■□□□□ 0.02
PCIF1-202ENST00000479348 UPP1Q16831 310 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 ANKRD40Q6AI12 368 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 USP37Q86T82 979 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 GDPD5Q8WTR4 605 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 C18orf25Q96B23 403 aaPredicted RBP15.15■□□□□ 0.02
PCIF1-202ENST00000479348 MRPL38Q96DV4 380 aaKnown RBP15.15■□□□□ 0.02
PCIF1-202ENST00000479348 FNBP1Q96RU3 617 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 MKNK1Q9BUB5 465 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 PDE11AQ9HCR9 933 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 ALG13Q9NP73 1137 aaKnown RBP15.15■□□□□ 0.02
PCIF1-202ENST00000479348 ADAM28Q9UKQ2 775 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 PRG3Q9Y2Y8 225 aaPredicted RBP15.15■□□□□ 0.02
PCIF1-202ENST00000479348 TRIP11Q15643 1979 aa15.15■□□□□ 0.02
PCIF1-202ENST00000479348 GRM6O15303 877 aa15.14■□□□□ 0.01
PCIF1-202ENST00000479348 TRAPPC3O43617 180 aa15.14■□□□□ 0.01
PCIF1-202ENST00000479348 TADA2AO75478 443 aa15.14■□□□□ 0.01
PCIF1-202ENST00000479348 B3GAT3O94766 335 aa15.14■□□□□ 0.01
PCIF1-202ENST00000479348 NFICP08651 508 aa15.14■□□□□ 0.01
PCIF1-202ENST00000479348 SPAG1Q07617 926 aa15.14■□□□□ 0.01
PCIF1-202ENST00000479348 ELAVL2Q12926 359 aaKnown RBP15.14■□□□□ 0.01
PCIF1-202ENST00000479348 CEP135Q66GS9 1140 aa15.14■□□□□ 0.01
PCIF1-202ENST00000479348 KLHL10Q6JEL2 608 aa15.14■□□□□ 0.01
PCIF1-202ENST00000479348 WDR49Q8IV35 697 aa15.14■□□□□ 0.01
PCIF1-202ENST00000479348 ZC3H3Q8IXZ2 948 aaKnown RBP15.14■□□□□ 0.01
PCIF1-202ENST00000479348 TMC2Q8TDI7 906 aa15.14■□□□□ 0.01
PCIF1-202ENST00000479348 POF1BQ8WVV4 589 aa15.14■□□□□ 0.01
PCIF1-202ENST00000479348 NELFBQ8WX92 580 aa15.14■□□□□ 0.01
PCIF1-202ENST00000479348 GUCD1Q96NT3 240 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms