RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 RABGGTAQ92696 567 aa16.53■□□□□ 0.24
COL16A1-211ENST00000479100 HLA-CQ95604 372 aa16.53■□□□□ 0.24
COL16A1-211ENST00000479100 KIF12Q96FN5 646 aa16.53■□□□□ 0.24
COL16A1-211ENST00000479100 ZMAT2Q96NC0 199 aaKnown RBP16.53■□□□□ 0.24
COL16A1-211ENST00000479100 C11orf84Q9BUA3 381 aaPredicted RBP16.53■□□□□ 0.24
COL16A1-211ENST00000479100 PLVAPQ9BX97 442 aa16.53■□□□□ 0.24
COL16A1-211ENST00000479100 PLEKHA5Q9HAU0 1116 aa16.53■□□□□ 0.24
COL16A1-211ENST00000479100 RBAKQ9NYW8 714 aaPredicted RBP16.53■□□□□ 0.24
COL16A1-211ENST00000479100 SPG21Q9NZD8 308 aa16.53■□□□□ 0.24
COL16A1-211ENST00000479100 CNTN3Q9P232 1028 aa16.53■□□□□ 0.24
COL16A1-211ENST00000479100 FAN1Q9Y2M0 1017 aa16.53■□□□□ 0.24
COL16A1-211ENST00000479100 PRG3Q9Y2Y8 225 aaPredicted RBP16.53■□□□□ 0.24
COL16A1-211ENST00000479100 ZNF233A6NK53 670 aa16.52■□□□□ 0.24
COL16A1-211ENST00000479100 EXOC3O60645 756 aa16.52■□□□□ 0.24
COL16A1-211ENST00000479100 NR3C1P04150 777 aa16.52■□□□□ 0.24
COL16A1-211ENST00000479100 KCNE1P15382 129 aa16.52■□□□□ 0.24
COL16A1-211ENST00000479100 XKR4Q5GH76 650 aa16.52■□□□□ 0.24
COL16A1-211ENST00000479100 CBWD2Q8IUF1 395 aa16.52■□□□□ 0.24
COL16A1-211ENST00000479100 ADSSL1Q8N142 457 aa16.52■□□□□ 0.24
COL16A1-211ENST00000479100 C18orf25Q96B23 403 aaPredicted RBP16.52■□□□□ 0.24
COL16A1-211ENST00000479100 PPP1R10Q96QC0 940 aaKnown RBP16.52■□□□□ 0.24
COL16A1-211ENST00000479100 TSG101Q99816 390 aa16.52■□□□□ 0.24
COL16A1-211ENST00000479100 TMEM175Q9BSA9 504 aa16.52■□□□□ 0.24
COL16A1-211ENST00000479100 KIAA1586Q9HCI6 787 aa16.52■□□□□ 0.24
COL16A1-211ENST00000479100 ALG13Q9NP73 1137 aaKnown RBP16.52■□□□□ 0.24
COL16A1-211ENST00000479100 SLC38A7Q9NVC3 462 aa16.52■□□□□ 0.24
COL16A1-211ENST00000479100 CACNG4Q9UBN1 327 aa16.52■□□□□ 0.24
COL16A1-211ENST00000479100 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.51■□□□□ 0.23
COL16A1-211ENST00000479100 C5orf67F2Z3F1 127 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 NRP1O14786 923 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 PSMA7O14818 248 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 FGF18O76093 207 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 IL18RAPO95256 599 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 CD44P16070 742 aaKnown RBP16.51■□□□□ 0.23
COL16A1-211ENST00000479100 PTMSP20962 102 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 BMP6P22004 513 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 PPM1AP35813 382 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 DSC1Q08554 894 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 TUSC3Q13454 348 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 CCDC183Q5T5S1 534 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 JADE1Q6IE81 842 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 BRSK2Q8IWQ3 736 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 CD302Q8IX05 232 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 C12orf56Q8IXR9 622 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 SLC39A11Q8N1S5 342 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 TRIML1Q8N9V2 468 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 TMEM169Q96HH4 297 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 COLEC11Q9BWP8 271 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 GOLGA2P5Q9HBQ8 144 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 TRAF3IP3Q9Y228 551 aa16.51■□□□□ 0.23
COL16A1-211ENST00000479100 BDP1A6H8Y1 2624 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 PPP1R3GB7ZBB8 358 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 H3BNC9 293 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 GRM6O15303 877 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 ITGB1P05556 798 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 NFICP08651 508 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 NR2F2P24468 414 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 RPL13P26373 211 aaKnown RBP16.5■□□□□ 0.23
COL16A1-211ENST00000479100 PPP1R2P41236 205 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 KRT17Q04695 432 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 HSP90AA2PQ14568 343 aaPredicted RBP16.5■□□□□ 0.23
COL16A1-211ENST00000479100 TMEM132DQ14C87 1099 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 NAB2Q15742 525 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 SNRNP35Q16560 246 aaKnown RBP16.5■□□□□ 0.23
COL16A1-211ENST00000479100 COBLL1Q53SF7 1204 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 CEP135Q66GS9 1140 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 P2RX5Q93086 422 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 DHTKD1Q96HY7 919 aaPredicted RBP16.5■□□□□ 0.23
COL16A1-211ENST00000479100 PAAF1Q9BRP4 392 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 ASB7Q9H672 318 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 PDE11AQ9HCR9 933 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 TUBGCP4Q9UGJ1 667 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 CTNND2Q9UQB3 1225 aa16.5■□□□□ 0.23
COL16A1-211ENST00000479100 KIAA1671Q9BY89 1806 aa16.49■□□□□ 0.23
COL16A1-211ENST00000479100 CARNS1A5YM72 827 aa16.49■□□□□ 0.23
COL16A1-211ENST00000479100 CITO14578 2027 aa16.49■□□□□ 0.23
COL16A1-211ENST00000479100 XPOTO43592 962 aaKnown RBP16.49■□□□□ 0.23
COL16A1-211ENST00000479100 TADA2AO75478 443 aa16.49■□□□□ 0.23
COL16A1-211ENST00000479100 ADRB2P07550 413 aa16.49■□□□□ 0.23
COL16A1-211ENST00000479100 CCNE1P24864 410 aa16.49■□□□□ 0.23
COL16A1-211ENST00000479100 GUCY2FP51841 1108 aa16.49■□□□□ 0.23
COL16A1-211ENST00000479100 WNT7BP56706 349 aa16.49■□□□□ 0.23
COL16A1-211ENST00000479100 TFAMQ00059 246 aaKnown RBP16.49■□□□□ 0.23
COL16A1-211ENST00000479100 POU5F1Q01860 360 aaKnown RBP16.49■□□□□ 0.23
COL16A1-211ENST00000479100 SOX4Q06945 474 aaPredicted RBP16.49■□□□□ 0.23
COL16A1-211ENST00000479100 ADAM9Q13443 819 aa16.49■□□□□ 0.23
COL16A1-211ENST00000479100 ANKRD40Q6AI12 368 aa16.49■□□□□ 0.23
COL16A1-211ENST00000479100 CAVIN1Q6NZI2 390 aaKnown RBP16.49■□□□□ 0.23
COL16A1-211ENST00000479100 NLRC5Q86WI3 1866 aa16.49■□□□□ 0.23
COL16A1-211ENST00000479100 TMEM173Q86WV6 379 aaPredicted RBP16.49■□□□□ 0.23
COL16A1-211ENST00000479100 SLC9A9Q8IVB4 645 aa16.49■□□□□ 0.23
COL16A1-211ENST00000479100 TMEM130Q8N3G9 435 aa16.49■□□□□ 0.23
COL16A1-211ENST00000479100 BEST2Q8NFU1 509 aa16.49■□□□□ 0.23
COL16A1-211ENST00000479100 SPPL3Q8TCT6 385 aa16.49■□□□□ 0.23
COL16A1-211ENST00000479100 HASPINQ8TF76 798 aa16.49■□□□□ 0.23
COL16A1-211ENST00000479100 BCL7CQ8WUZ0 217 aaPredicted RBP16.49■□□□□ 0.23
COL16A1-211ENST00000479100 POF1BQ8WVV4 589 aa16.49■□□□□ 0.23
COL16A1-211ENST00000479100 NELFBQ8WX92 580 aa16.49■□□□□ 0.23
COL16A1-211ENST00000479100 MRPL38Q96DV4 380 aaKnown RBP16.49■□□□□ 0.23
COL16A1-211ENST00000479100 IGSF21Q96ID5 467 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms