RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 NCALDP61601 193 aa11.77□□□□□ -0.52
LRRFIP1-211ENST00000478958 AP3B2Q13367 1082 aa11.77□□□□□ -0.52
LRRFIP1-211ENST00000478958 ITIH4Q14624 930 aa11.77□□□□□ -0.52
LRRFIP1-211ENST00000478958 BMT2Q1RMZ1 405 aa11.77□□□□□ -0.52
LRRFIP1-211ENST00000478958 SH2D4BQ5SQS7 431 aa11.77□□□□□ -0.52
LRRFIP1-211ENST00000478958 C6orf118Q5T5N4 469 aa11.77□□□□□ -0.52
LRRFIP1-211ENST00000478958 RC3H1Q5TC82 1133 aaKnown RBP11.77□□□□□ -0.52
LRRFIP1-211ENST00000478958 FOXB2Q5VYV0 432 aa11.77□□□□□ -0.52
LRRFIP1-211ENST00000478958 NCCRP1Q6ZVX7 275 aaPredicted RBP11.77□□□□□ -0.52
LRRFIP1-211ENST00000478958 PWWP2AQ96N64 755 aa11.77□□□□□ -0.52
LRRFIP1-211ENST00000478958 FAM118BQ9BPY3 351 aa11.77□□□□□ -0.52
LRRFIP1-211ENST00000478958 LNPEPQ9UIQ6 1025 aa11.77□□□□□ -0.52
LRRFIP1-211ENST00000478958 NCANO14594 1321 aa11.77□□□□□ -0.52
LRRFIP1-211ENST00000478958 HNRNPRO43390 633 aaKnown RBP11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 CALCAP01258 141 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 SERPINB2P05120 415 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 YY1P25490 414 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 ANXA13P27216 316 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 SERPINB4P48594 390 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 RAD23BP54727 409 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 AUHQ13825 339 aaKnown RBP11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 RASIP1Q5U651 963 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 ZNF720Q7Z2F6 126 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 FAM20AQ96MK3 541 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 ZSWIM1Q9BR11 485 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 ZC3H12CQ9C0D7 883 aaKnown RBP11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 GLT8D2Q9H1C3 349 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 OLFML3Q9NRN5 406 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 WRAP73Q9P2S5 460 aaPredicted RBP11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 ZBTB21Q9ULJ3 1066 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 SYNGAP1Q96PV0 1343 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 CLDN3O15551 220 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 SGPL1O95470 568 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 GH1P01241 217 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 CHRNA3P32297 505 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 BFSP1Q12934 665 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 CALCOCO2Q13137 446 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 C16orf87Q6PH81 154 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 C1orf186Q6ZWK4 172 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 PIGWQ7Z7B1 504 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 EXOC3L1Q86VI1 746 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 PPM1KQ8N3J5 372 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 ATG4AQ8WYN0 398 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 KCNN1Q92952 543 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 ARHGEF2Q92974 986 aaKnown RBP11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 IFT43Q96FT9 208 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 WDR18Q9BV38 432 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 ASIC3Q9UHC3 531 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 TRIM33Q9UPN9 1127 aa11.77□□□□□ -0.53
LRRFIP1-211ENST00000478958 TMEM120BA0PK00 339 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 GOLGA8IPA6NC78 632 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 GOLGA8JA6NMD2 632 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 NDUFB10O96000 172 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 AGTP01019 485 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 RARAP10276 462 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 SREBF1P36956 1147 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 AFF2P51816 1311 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 P3H1Q32P28 736 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 CCDC174Q6PII3 467 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 C15orf52Q6ZUT6 534 aaKnown RBP11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 SAPCD2Q86UD0 394 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 RHOT2Q8IXI1 618 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 CRYGNQ8WXF5 182 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 CENPTQ96BT3 561 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 IFT74Q96LB3 600 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 MBOAT7Q96N66 472 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 PCDHB18PQ96TA0 734 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 SYT11Q9BT88 431 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 CHMP2BQ9UQN3 213 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 K7ENM7 598 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 IPO5O00410 1097 aaKnown RBP11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 CYP26A1O43174 497 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 GAS7O60861 476 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 BCRP11274 1271 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 GAP43P17677 238 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 GPC5P78333 572 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 MCL1Q07820 350 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 PPP3CAQ08209 521 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 CNGA2Q16280 664 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 C2CD6Q53TS8 623 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 CMPK2Q5EBM0 449 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 APOBEC3HQ6NTF7 200 aaKnown RBP11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 ZNF653Q96CK0 615 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 HSD17B14Q9BPX1 270 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 TRAIPQ9BWF2 469 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 CDC42EP4Q9H3Q1 356 aaKnown RBP11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 PNMA3Q9UL41 463 aa11.76□□□□□ -0.53
LRRFIP1-211ENST00000478958 TNRC6CQ9HCJ0 1690 aaKnown RBP11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 PFASO15067 1338 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 TBX3O15119 743 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 ASAP2O43150 1006 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 ACADSP16219 412 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 COILP38432 576 aaPredicted RBP11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 PEX5P50542 639 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 PPP2R5EQ16537 467 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 KYNUQ16719 465 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 DAB2IPQ5VWQ8 1189 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 IRGCQ6NXR0 463 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 SLC47A2Q86VL8 602 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 SIAH1Q8IUQ4 282 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms