RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 ACACAQ13085 2346 aa13.69□□□□□ -0.22
HDAC8-217ENST00000478743 PTPRBP23467 1997 aa13.69□□□□□ -0.22
HDAC8-217ENST00000478743 ASXL3Q9C0F0 2248 aa13.68□□□□□ -0.22
HDAC8-217ENST00000478743 CNTNAP5Q8WYK1 1306 aa13.68□□□□□ -0.22
HDAC8-217ENST00000478743 NUP210Q8TEM1 1887 aaPredicted RBP13.68□□□□□ -0.22
HDAC8-217ENST00000478743 CCDC163A0A0D9SF12 145 aa13.68□□□□□ -0.22
HDAC8-217ENST00000478743 NR1I2O75469 434 aa13.68□□□□□ -0.22
HDAC8-217ENST00000478743 NAPAP54920 295 aa13.68□□□□□ -0.22
HDAC8-217ENST00000478743 UVSSAQ2YD98 709 aa13.68□□□□□ -0.22
HDAC8-217ENST00000478743 CDR2LQ86X02 465 aaPredicted RBP13.68□□□□□ -0.22
HDAC8-217ENST00000478743 TICAM2Q86XR7 235 aa13.68□□□□□ -0.22
HDAC8-217ENST00000478743 MFSD6LQ8IWD5 586 aa13.68□□□□□ -0.22
HDAC8-217ENST00000478743 MB21D2Q8IYB1 491 aaPredicted RBP13.68□□□□□ -0.22
HDAC8-217ENST00000478743 ZNF579Q8NAF0 562 aaKnown RBP13.68□□□□□ -0.22
HDAC8-217ENST00000478743 CSGALNACT1Q8TDX6 532 aa13.68□□□□□ -0.22
HDAC8-217ENST00000478743 NIFKQ9BYG3 293 aaKnown RBP13.68□□□□□ -0.22
HDAC8-217ENST00000478743 UNC45AQ9H3U1 944 aa13.68□□□□□ -0.22
HDAC8-217ENST00000478743 UBN1Q9NPG3 1134 aa13.68□□□□□ -0.22
HDAC8-217ENST00000478743 FSCN3Q9NQT6 498 aa13.68□□□□□ -0.22
HDAC8-217ENST00000478743 MTRRQ9UBK8 725 aa13.68□□□□□ -0.22
HDAC8-217ENST00000478743 RAI2Q9Y5P3 530 aa13.68□□□□□ -0.22
HDAC8-217ENST00000478743 COL4A3BPQ9Y5P4 624 aa13.68□□□□□ -0.22
HDAC8-217ENST00000478743 PTPRDP23468 1912 aa13.67□□□□□ -0.22
HDAC8-217ENST00000478743 E7EWF7 191 aa13.67□□□□□ -0.22
HDAC8-217ENST00000478743 PYCARD-AS1I3L0S3 204 aa13.67□□□□□ -0.22
HDAC8-217ENST00000478743 KHNYNO15037 678 aaKnown RBP13.67□□□□□ -0.22
HDAC8-217ENST00000478743 TSPAN1O60635 241 aa13.67□□□□□ -0.22
HDAC8-217ENST00000478743 SRGAP2CP0DJJ0 459 aa13.67□□□□□ -0.22
HDAC8-217ENST00000478743 PTPN2P17706 415 aa13.67□□□□□ -0.22
HDAC8-217ENST00000478743 BCKDHBP21953 392 aa13.67□□□□□ -0.22
HDAC8-217ENST00000478743 MAPK8P45983 427 aa13.67□□□□□ -0.22
HDAC8-217ENST00000478743 TNK2Q07912 1038 aa13.67□□□□□ -0.22
HDAC8-217ENST00000478743 GRIK3Q13003 919 aa13.67□□□□□ -0.22
HDAC8-217ENST00000478743 TRDNQ13061 729 aa13.67□□□□□ -0.22
HDAC8-217ENST00000478743 ELF2Q15723 593 aa13.67□□□□□ -0.22
HDAC8-217ENST00000478743 PRR16Q569H4 304 aa13.67□□□□□ -0.22
HDAC8-217ENST00000478743 TMTC3Q6ZXV5 915 aa13.67□□□□□ -0.22
HDAC8-217ENST00000478743 CHFRQ96EP1 664 aa13.67□□□□□ -0.22
HDAC8-217ENST00000478743 LZTS2Q9BRK4 669 aa13.67□□□□□ -0.22
HDAC8-217ENST00000478743 CCDC86Q9H6F5 360 aaKnown RBP13.67□□□□□ -0.22
HDAC8-217ENST00000478743 DIAPH3Q9NSV4 1193 aa13.67□□□□□ -0.22
HDAC8-217ENST00000478743 CCDC194A0A1B0GVG4 234 aa13.66□□□□□ -0.22
HDAC8-217ENST00000478743 ARHGEF37A1IGU5 675 aa13.66□□□□□ -0.22
HDAC8-217ENST00000478743 EDIL3O43854 480 aa13.66□□□□□ -0.22
HDAC8-217ENST00000478743 MAFO75444 373 aaPredicted RBP13.66□□□□□ -0.22
HDAC8-217ENST00000478743 SEC24AO95486 1093 aa13.66□□□□□ -0.22
HDAC8-217ENST00000478743 FOSP01100 380 aaPredicted RBP13.66□□□□□ -0.22
HDAC8-217ENST00000478743 CYP3A4P08684 503 aa13.66□□□□□ -0.22
HDAC8-217ENST00000478743 MLLT6P55198 1093 aaPredicted RBP13.66□□□□□ -0.22
HDAC8-217ENST00000478743 AP3B2Q13367 1082 aa13.66□□□□□ -0.22
HDAC8-217ENST00000478743 TEAD2Q15562 447 aa13.66□□□□□ -0.22
HDAC8-217ENST00000478743 STXBP5Q5T5C0 1151 aa13.66□□□□□ -0.22
HDAC8-217ENST00000478743 PMS2CLQ68D20 193 aa13.66□□□□□ -0.22
HDAC8-217ENST00000478743 FSTL4Q6MZW2 842 aa13.66□□□□□ -0.22
HDAC8-217ENST00000478743 PLEKHM2Q8IWE5 1019 aa13.66□□□□□ -0.22
HDAC8-217ENST00000478743 SLC39A7Q92504 469 aa13.66□□□□□ -0.22
HDAC8-217ENST00000478743 TMEM143Q96AN5 459 aa13.66□□□□□ -0.22
HDAC8-217ENST00000478743 MSANTD3Q96H12 275 aa13.66□□□□□ -0.22
HDAC8-217ENST00000478743 C8orf33Q9H7E9 229 aaPredicted RBP13.66□□□□□ -0.22
HDAC8-217ENST00000478743 TRPV4Q9HBA0 871 aa13.66□□□□□ -0.22
HDAC8-217ENST00000478743 SCUBE2Q9NQ36 999 aa13.66□□□□□ -0.22
HDAC8-217ENST00000478743 RHOBTB1O94844 696 aa13.65□□□□□ -0.22
HDAC8-217ENST00000478743 CALM1P0DP23 149 aa13.65□□□□□ -0.22
HDAC8-217ENST00000478743 CALM2P0DP24 149 aa13.65□□□□□ -0.22
HDAC8-217ENST00000478743 CALM3P0DP25 149 aa13.65□□□□□ -0.22
HDAC8-217ENST00000478743 DNM2P50570 870 aa13.65□□□□□ -0.22
HDAC8-217ENST00000478743 CDC42EP1Q00587 391 aa13.65□□□□□ -0.22
HDAC8-217ENST00000478743 PTH1RQ03431 593 aa13.65□□□□□ -0.22
HDAC8-217ENST00000478743 NAIF1Q69YI7 327 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-217ENST00000478743 ANO5Q75V66 913 aa13.65□□□□□ -0.22
HDAC8-217ENST00000478743 PDZD4Q76G19 769 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-217ENST00000478743 RALGPS2Q86X27 583 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-217ENST00000478743 CNNM3Q8NE01 707 aa13.65□□□□□ -0.22
HDAC8-217ENST00000478743 DDX27Q96GQ7 796 aaKnown RBP13.65□□□□□ -0.22
HDAC8-217ENST00000478743 SLC8A2Q9UPR5 921 aa13.65□□□□□ -0.22
HDAC8-217ENST00000478743 GIT1Q9Y2X7 761 aa13.65□□□□□ -0.22
HDAC8-217ENST00000478743 PCDH15Q96QU1 1955 aa13.65□□□□□ -0.22
HDAC8-217ENST00000478743 MUC22E2RYF6 1773 aaPredicted RBP13.64□□□□□ -0.23
HDAC8-217ENST00000478743 SMCO2A6NFE2 343 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 CCER2I3L3R5 266 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 I3L4J1 428 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 PTGESO14684 152 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 CHADO15335 359 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 MSH4O15457 936 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 B4GALT5O43286 388 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 LRG1P02750 347 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 PRKCBP05771 671 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 FGFR3P22607 806 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 TKTP29401 623 aaKnown RBP13.64□□□□□ -0.23
HDAC8-217ENST00000478743 GBP1P32455 592 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 GNAQP50148 359 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 NPEPPSP55786 919 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 SETQ01105 290 aaPredicted RBP13.64□□□□□ -0.23
HDAC8-217ENST00000478743 ROR1Q01973 937 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 FCHO2Q0JRZ9 810 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 SEMA3BQ13214 749 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 SART3Q15020 963 aaKnown RBP13.64□□□□□ -0.23
HDAC8-217ENST00000478743 NAB2Q15742 525 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 AMHR2Q16671 573 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 XKR3Q5GH77 459 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms