RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 ATG2AQ2TAZ0 1938 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 H3BQ06 376 aaPredicted RBP12.7□□□□□ -0.38
PDCD11-204ENST00000478543 PES1O00541 588 aaKnown RBP12.7□□□□□ -0.38
PDCD11-204ENST00000478543 KIAA0391O15091 583 aaKnown RBP12.7□□□□□ -0.38
PDCD11-204ENST00000478543 AP5Z1O43299 807 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 DCXO43602 365 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 FAM189A1O60320 539 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 SERPINC1P01008 464 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 STAG3L1P0CL83 205 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 KRT13P13646 458 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 PRKCSHP14314 528 aaPredicted RBP12.7□□□□□ -0.38
PDCD11-204ENST00000478543 ZSCAN20P17040 1043 aaPredicted RBP12.7□□□□□ -0.38
PDCD11-204ENST00000478543 COPB1P53618 953 aaKnown RBP12.7□□□□□ -0.38
PDCD11-204ENST00000478543 DCAF17Q5H9S7 520 aaPredicted RBP12.7□□□□□ -0.38
PDCD11-204ENST00000478543 TCERG1LQ5VWI1 586 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 CRELD2Q6UXH1 353 aaPredicted RBP12.7□□□□□ -0.38
PDCD11-204ENST00000478543 FRMD5Q7Z6J6 570 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 TMEM192Q8IY95 271 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 PRSS33Q8NF86 280 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 TMEM174Q8WUU8 243 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 FAM212AQ96EL1 285 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 CCDC51Q96ER9 411 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 ADAM2Q99965 735 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 MKNK1Q9BUB5 465 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 VPS16Q9H269 839 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 KIAA1586Q9HCI6 787 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 RBAKQ9NYW8 714 aaPredicted RBP12.7□□□□□ -0.38
PDCD11-204ENST00000478543 LMCD1Q9NZU5 365 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 ARMCX3Q9UH62 379 aaPredicted RBP12.7□□□□□ -0.38
PDCD11-204ENST00000478543 LIMA1Q9UHB6 759 aaKnown RBP12.7□□□□□ -0.38
PDCD11-204ENST00000478543 HES2Q9Y543 173 aa12.7□□□□□ -0.38
PDCD11-204ENST00000478543 DNAH14Q0VDD8 3507 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 LINC01553A4QN01 128 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 ZNF233A6NK53 670 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 TRIM49P0CI25 452 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 TRIM49CP0CI26 452 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 ACTN1P12814 892 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 ALADP13716 330 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 ZP2Q05996 745 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 CYP24A1Q07973 514 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 DSC3Q14574 896 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 IER5LQ5T953 404 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 TRIM59Q8IWR1 403 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 DBF4BQ8NFT6 615 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 PLEKHO2Q8TD55 490 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 SEPT8Q92599 483 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 CCDC127Q96BQ5 260 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 TUBGCP2Q9BSJ2 902 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 CCDC94Q9BW85 323 aaPredicted RBP12.69□□□□□ -0.38
PDCD11-204ENST00000478543 NXF3Q9H4D5 531 aaKnown RBP12.69□□□□□ -0.38
PDCD11-204ENST00000478543 MMRN2Q9H8L6 949 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 METTL14Q9HCE5 456 aaKnown RBP12.69□□□□□ -0.38
PDCD11-204ENST00000478543 CHST12Q9NRB3 414 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 SNTG2Q9NY99 539 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 IFNKQ9P0W0 207 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 CPSF3Q9UKF6 684 aaKnown RBP12.69□□□□□ -0.38
PDCD11-204ENST00000478543 IPPQ9Y573 584 aa12.69□□□□□ -0.38
PDCD11-204ENST00000478543 MAPK13O15264 365 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 TPM2P07951 284 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 CLTAP09496 248 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 CXCL8P10145 99 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 RFC2P35250 354 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 GRM5P41594 1212 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 VAMP7P51809 220 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 MARSP56192 900 aaKnown RBP12.68□□□□□ -0.38
PDCD11-204ENST00000478543 WNT7BP56706 349 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 ERVK-21P61565 698 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 DLG4P78352 724 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 BFSP1Q12934 665 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 HSP90AA2PQ14568 343 aaPredicted RBP12.68□□□□□ -0.38
PDCD11-204ENST00000478543 ENOX2Q16206 610 aaKnown RBP12.68□□□□□ -0.38
PDCD11-204ENST00000478543 MAN2A1Q16706 1144 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 PLEKHG4Q58EX7 1191 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 LMBRD2Q68DH5 695 aaPredicted RBP12.68□□□□□ -0.38
PDCD11-204ENST00000478543 INTS8Q75QN2 995 aaKnown RBP12.68□□□□□ -0.38
PDCD11-204ENST00000478543 APTXQ7Z2E3 356 aaKnown RBP12.68□□□□□ -0.38
PDCD11-204ENST00000478543 BRSK2Q8IWQ3 736 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 RNF169Q8NCN4 708 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 SMG8Q8ND04 991 aaKnown RBP12.68□□□□□ -0.38
PDCD11-204ENST00000478543 LINC01599Q8WXQ3 324 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 BORCS6Q96GS4 357 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 FAM84AQ96KN4 292 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 MFSD14AQ96MC6 490 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 NAP1L5Q96NT1 182 aaPredicted RBP12.68□□□□□ -0.38
PDCD11-204ENST00000478543 C17orf80Q9BSJ5 609 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 TRIM5Q9C035 493 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 KCNH6Q9H252 994 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 RNF39Q9H2S5 420 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 RPF1Q9H9Y2 349 aaKnown RBP12.68□□□□□ -0.38
PDCD11-204ENST00000478543 PDE11AQ9HCR9 933 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 ALG13Q9NP73 1137 aaKnown RBP12.68□□□□□ -0.38
PDCD11-204ENST00000478543 TOPORSQ9NS56 1045 aaPredicted RBP12.68□□□□□ -0.38
PDCD11-204ENST00000478543 FAM105AQ9NUU6 356 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 PARP2Q9UGN5 583 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 PCDHB2Q9Y5E7 798 aa12.68□□□□□ -0.38
PDCD11-204ENST00000478543 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.68□□□□□ -0.38
PDCD11-204ENST00000478543 C19orf67A6NJJ6 358 aa12.67□□□□□ -0.38
PDCD11-204ENST00000478543 LRRIQ3A6PVS8 624 aaPredicted RBP12.67□□□□□ -0.38
PDCD11-204ENST00000478543 PARNO95453 639 aaKnown RBP12.67□□□□□ -0.38
PDCD11-204ENST00000478543 CXCL10P02778 98 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms