RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 KCTD5Q9NXV2 234 aa4.72□□□□□ -1.65
HPS3-205ENST00000478525 SLC17A6Q9P2U8 582 aa4.72□□□□□ -1.65
HPS3-205ENST00000478525 DPP7Q9UHL4 492 aa4.72□□□□□ -1.65
HPS3-205ENST00000478525 NOC2LQ9Y3T9 749 aaKnown RBP4.72□□□□□ -1.65
HPS3-205ENST00000478525 PROP1O75360 226 aa4.71□□□□□ -1.66
HPS3-205ENST00000478525 PRSS23O95084 383 aa4.71□□□□□ -1.66
HPS3-205ENST00000478525 GPANK1O95872 356 aa4.71□□□□□ -1.66
HPS3-205ENST00000478525 RAP2AP10114 183 aa4.71□□□□□ -1.66
HPS3-205ENST00000478525 SLC6A2P23975 617 aa4.71□□□□□ -1.66
HPS3-205ENST00000478525 UGT8Q16880 541 aa4.71□□□□□ -1.66
HPS3-205ENST00000478525 ZNF788Q6ZQV5 615 aa4.71□□□□□ -1.66
HPS3-205ENST00000478525 FAM43AQ8N2R8 423 aa4.71□□□□□ -1.66
HPS3-205ENST00000478525 RNPC3Q96LT9 517 aaKnown RBP4.71□□□□□ -1.66
HPS3-205ENST00000478525 C1QTNF7Q9BXJ2 289 aa4.71□□□□□ -1.66
HPS3-205ENST00000478525 UNKLQ9H9P5 680 aaKnown RBP4.71□□□□□ -1.66
HPS3-205ENST00000478525 ARPP21Q9UBL0 812 aaPredicted RBP4.71□□□□□ -1.66
HPS3-205ENST00000478525 PROB1E7EW31 1015 aa4.7□□□□□ -1.66
HPS3-205ENST00000478525 ZFPL1O95159 310 aa4.7□□□□□ -1.66
HPS3-205ENST00000478525 ATP5JP18859 108 aa4.7□□□□□ -1.66
HPS3-205ENST00000478525 ECHS1P30084 290 aa4.7□□□□□ -1.66
HPS3-205ENST00000478525 SREBF1P36956 1147 aa4.7□□□□□ -1.66
HPS3-205ENST00000478525 ZNF81P51508 661 aa4.7□□□□□ -1.66
HPS3-205ENST00000478525 VAV2P52735 878 aa4.7□□□□□ -1.66
HPS3-205ENST00000478525 CCT2P78371 535 aaKnown RBP4.7□□□□□ -1.66
HPS3-205ENST00000478525 CDK17Q00537 523 aa4.7□□□□□ -1.66
HPS3-205ENST00000478525 SRSF4Q08170 494 aaKnown RBP4.7□□□□□ -1.66
HPS3-205ENST00000478525 FSCN1Q16658 493 aaKnown RBP4.7□□□□□ -1.66
HPS3-205ENST00000478525 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.7□□□□□ -1.66
HPS3-205ENST00000478525 C16orf86Q6ZW13 317 aa4.7□□□□□ -1.66
HPS3-205ENST00000478525 HOMER1Q86YM7 354 aa4.7□□□□□ -1.66
HPS3-205ENST00000478525 AHI1Q8N157 1196 aa4.7□□□□□ -1.66
HPS3-205ENST00000478525 GPR156Q8NFN8 814 aa4.7□□□□□ -1.66
HPS3-205ENST00000478525 SSH3Q8TE77 659 aa4.7□□□□□ -1.66
HPS3-205ENST00000478525 PTCD3Q96EY7 689 aaKnown RBP4.7□□□□□ -1.66
HPS3-205ENST00000478525 ZNF778Q96MU6 729 aa4.7□□□□□ -1.66
HPS3-205ENST00000478525 TOPORSQ9NS56 1045 aaPredicted RBP4.7□□□□□ -1.66
HPS3-205ENST00000478525 WIPF3A6NGB9 483 aa4.69□□□□□ -1.66
HPS3-205ENST00000478525 POMCP01189 267 aa4.69□□□□□ -1.66
HPS3-205ENST00000478525 GUCY1A2P33402 732 aa4.69□□□□□ -1.66
HPS3-205ENST00000478525 ALDH1A3P47895 512 aa4.69□□□□□ -1.66
HPS3-205ENST00000478525 GEN1Q17RS7 908 aa4.69□□□□□ -1.66
HPS3-205ENST00000478525 ATP13A4Q4VNC1 1196 aa4.69□□□□□ -1.66
HPS3-205ENST00000478525 THNSL2Q86YJ6 484 aa4.69□□□□□ -1.66
HPS3-205ENST00000478525 LNX2Q8N448 690 aa4.69□□□□□ -1.66
HPS3-205ENST00000478525 TSPEARQ8WU66 669 aa4.69□□□□□ -1.66
HPS3-205ENST00000478525 UROC1Q96N76 676 aa4.69□□□□□ -1.66
HPS3-205ENST00000478525 UHRF1Q96T88 793 aaPredicted RBP4.69□□□□□ -1.66
HPS3-205ENST00000478525 HEPHQ9BQS7 1158 aa4.69□□□□□ -1.66
HPS3-205ENST00000478525 KMT5AQ9NQR1 393 aa4.69□□□□□ -1.66
HPS3-205ENST00000478525 FBXO34Q9NWN3 711 aa4.69□□□□□ -1.66
HPS3-205ENST00000478525 DMTF1Q9Y222 760 aa4.69□□□□□ -1.66
HPS3-205ENST00000478525 MTO1Q9Y2Z2 717 aaKnown RBP4.69□□□□□ -1.66
HPS3-205ENST00000478525 ENPP1P22413 925 aa4.68□□□□□ -1.66
HPS3-205ENST00000478525 UBXN2BQ14CS0 331 aa4.68□□□□□ -1.66
HPS3-205ENST00000478525 AKNAD1Q5T1N1 836 aa4.68□□□□□ -1.66
HPS3-205ENST00000478525 ZNF529Q6P280 563 aa4.68□□□□□ -1.66
HPS3-205ENST00000478525 FOXR2Q6PJQ5 311 aa4.68□□□□□ -1.66
HPS3-205ENST00000478525 PQLC1Q8N2U9 271 aa4.68□□□□□ -1.66
HPS3-205ENST00000478525 C9orf106Q8NAJ2 232 aa4.68□□□□□ -1.66
HPS3-205ENST00000478525 STON2Q8WXE9 905 aa4.68□□□□□ -1.66
HPS3-205ENST00000478525 HOXB13Q92826 284 aaPredicted RBP4.68□□□□□ -1.66
HPS3-205ENST00000478525 LDAHQ9H6V9 325 aa4.68□□□□□ -1.66
HPS3-205ENST00000478525 FANCLQ9NW38 375 aa4.68□□□□□ -1.66
HPS3-205ENST00000478525 MOCS1Q9NZB8 636 aa4.68□□□□□ -1.66
HPS3-205ENST00000478525 FAM30AQ9NZY2 134 aa4.68□□□□□ -1.66
HPS3-205ENST00000478525 SLC23A1Q9UHI7 598 aa4.68□□□□□ -1.66
HPS3-205ENST00000478525 SCOCQ9UIL1 159 aa4.68□□□□□ -1.66
HPS3-205ENST00000478525 IL2RBP14784 551 aa4.67□□□□□ -1.66
HPS3-205ENST00000478525 FPR1P21462 350 aa4.67□□□□□ -1.66
HPS3-205ENST00000478525 ADRM1Q16186 407 aa4.67□□□□□ -1.66
HPS3-205ENST00000478525 CCDC144BQ3MJ40 725 aa4.67□□□□□ -1.66
HPS3-205ENST00000478525 OTUD7BQ6GQQ9 843 aa4.67□□□□□ -1.66
HPS3-205ENST00000478525 CLRN3Q8NCR9 226 aa4.67□□□□□ -1.66
HPS3-205ENST00000478525 SREK1Q8WXA9 508 aaKnown RBP4.67□□□□□ -1.66
HPS3-205ENST00000478525 APPBP2Q92624 585 aa4.67□□□□□ -1.66
HPS3-205ENST00000478525 RAX2Q96IS3 184 aa4.67□□□□□ -1.66
HPS3-205ENST00000478525 ACAP3Q96P50 834 aa4.67□□□□□ -1.66
HPS3-205ENST00000478525 MYOCQ99972 504 aa4.67□□□□□ -1.66
HPS3-205ENST00000478525 PIF1Q9H611 641 aa4.67□□□□□ -1.66
HPS3-205ENST00000478525 DMRT3Q9NQL9 472 aa4.67□□□□□ -1.66
HPS3-205ENST00000478525 LANCL2Q9NS86 450 aa4.67□□□□□ -1.66
HPS3-205ENST00000478525 HSFX1Q9UBD0 423 aa4.67□□□□□ -1.66
HPS3-205ENST00000478525 ZNF70Q9UC06 446 aaPredicted RBP4.67□□□□□ -1.66
HPS3-205ENST00000478525 GSG1L2A8MUP6 293 aa4.66□□□□□ -1.66
HPS3-205ENST00000478525 PEX1O43933 1283 aa4.66□□□□□ -1.66
HPS3-205ENST00000478525 ERN1O75460 977 aaKnown RBP4.66□□□□□ -1.66
HPS3-205ENST00000478525 SEM1Q6ZVN7 128 aa4.66□□□□□ -1.66
HPS3-205ENST00000478525 UBE3BQ7Z3V4 1068 aa4.66□□□□□ -1.66
HPS3-205ENST00000478525 COLGALT2Q8IYK4 626 aa4.66□□□□□ -1.66
HPS3-205ENST00000478525 ZNF366Q8N895 744 aa4.66□□□□□ -1.66
HPS3-205ENST00000478525 Q8N9P0 234 aaPredicted RBP4.66□□□□□ -1.66
HPS3-205ENST00000478525 LEO1Q8WVC0 666 aaPredicted RBP4.66□□□□□ -1.66
HPS3-205ENST00000478525 SARAFQ96BY9 339 aa4.66□□□□□ -1.66
HPS3-205ENST00000478525 MFSD3Q96ES6 412 aa4.66□□□□□ -1.66
HPS3-205ENST00000478525 MARS2Q96GW9 593 aaKnown RBP4.66□□□□□ -1.66
HPS3-205ENST00000478525 SENP6Q9GZR1 1112 aaPredicted RBP4.66□□□□□ -1.66
HPS3-205ENST00000478525 AJAP1Q9UKB5 411 aaPredicted RBP4.66□□□□□ -1.66
HPS3-205ENST00000478525 WDR91A4D1P6 747 aa4.65□□□□□ -1.67
HPS3-205ENST00000478525 CKBP12277 381 aa4.65□□□□□ -1.67
HPS3-205ENST00000478525 BPIP17213 487 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms