RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 ANKFY1Q9P2R3 1169 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 CPSF3Q9UKF6 684 aaKnown RBP8.54□□□□□ -1.04
VMA21-203ENST00000477649 RAB21Q9UL25 225 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 CNTN6Q9UQ52 1028 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.54□□□□□ -1.04
VMA21-203ENST00000477649 CAPN6Q9Y6Q1 641 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 DUSP10Q9Y6W6 482 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 WDR81Q562E7 1941 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 CNTNAP2Q9UHC6 1331 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 SIP14410 1827 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 MIF4GDA9UHW6 222 aaKnown RBP8.53□□□□□ -1.04
VMA21-203ENST00000477649 INO80B-WBP1J3KQ70 363 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 LRRN2O75325 713 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 PALMO75781 387 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 F2P00734 622 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 HLA-DRAP01903 254 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 TNNC2P02585 160 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 MMP3P08254 477 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 GNAT1P11488 350 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 CYP11B1P15538 503 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 SMPD1P17405 629 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 ADCYAP1R1P41586 468 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 TM4SF4P48230 202 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 GALCP54803 685 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 GPC5P78333 572 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 MBTD1Q05BQ5 628 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 BIRC3Q13489 604 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 RPS6KA1Q15418 735 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 ENOX2Q16206 610 aaKnown RBP8.53□□□□□ -1.04
VMA21-203ENST00000477649 SGSM1Q2NKQ1 1148 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 DCAF4L1Q3SXM0 396 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 ZNF568Q3ZCX4 644 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 MAP9Q49MG5 647 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 C11orf63Q6NUN7 778 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 WDR93Q6P2C0 686 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 MTHFD1LQ6UB35 978 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 TMCO3Q6UWJ1 677 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 TRIM50Q86XT4 487 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 GLYCTKQ8IVS8 523 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 ARHGEF19Q8IW93 802 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 LRRC71Q8N4P6 559 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 MMGT1Q8N4V1 131 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 METTL13Q8N6R0 699 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 TPCN2Q8NHX9 752 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 LNX1Q8TBB1 728 aaPredicted RBP8.53□□□□□ -1.04
VMA21-203ENST00000477649 EPS8L1Q8TE68 723 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 USP6NLQ92738 828 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 SEMA4DQ92854 862 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 ANKRD36BP1Q96IX9 119 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 VCPIP1Q96JH7 1222 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 KREMEN1Q96MU8 473 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 NAP1L3Q99457 506 aaPredicted RBP8.53□□□□□ -1.04
VMA21-203ENST00000477649 ADPGKQ9BRR6 497 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 TLR10Q9BXR5 811 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 RNPEPQ9H4A4 650 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 RPF1Q9H9Y2 349 aaKnown RBP8.53□□□□□ -1.04
VMA21-203ENST00000477649 UVRAGQ9P2Y5 699 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 NOCTQ9UK39 431 aaKnown RBP8.53□□□□□ -1.04
VMA21-203ENST00000477649 AJAP1Q9UKB5 411 aaPredicted RBP8.53□□□□□ -1.04
VMA21-203ENST00000477649 ZHX1Q9UKY1 873 aaPredicted RBP8.53□□□□□ -1.04
VMA21-203ENST00000477649 TLL2Q9Y6L7 1015 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 PASKQ96RG2 1323 aa8.53□□□□□ -1.04
VMA21-203ENST00000477649 PLXNB2O15031 1838 aa8.52□□□□□ -1.04
VMA21-203ENST00000477649 SMIM35A0A1B0GVV1 85 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 IGF2BP3O00425 579 aaKnown RBP eCLIP8.52□□□□□ -1.05
VMA21-203ENST00000477649 ABLIM1O14639 778 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 ENC1O14682 589 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 CA12O43570 354 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 FAM189A1O60320 539 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 P4HA1P13674 534 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 AXLP30530 894 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 ATICP31939 592 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 ACOT2P49753 483 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 DRP2Q13474 957 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 TRPC3Q13507 836 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 CUL2Q13617 745 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 NCOA4Q13772 614 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 GRIK4Q16099 956 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 TMEM132AQ24JP5 1023 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 TDRD10Q5VZ19 366 aaKnown RBP8.52□□□□□ -1.05
VMA21-203ENST00000477649 Q6ZNB5 142 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 PEX26Q7Z412 305 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 CREG2Q8IUH2 290 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 RPUSD2Q8IZ73 545 aaKnown RBP8.52□□□□□ -1.05
VMA21-203ENST00000477649 NME8Q8N427 588 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 LRRC57Q8N9N7 239 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 NPLOC4Q8TAT6 608 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 ACTRT1Q8TDG2 376 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.52□□□□□ -1.05
VMA21-203ENST00000477649 ZNF516Q92618 1163 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 KCTD12Q96CX2 325 aaKnown RBP8.52□□□□□ -1.05
VMA21-203ENST00000477649 NLRP4Q96MN2 994 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 RPS6KC1Q96S38 1066 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 AP5M1Q9H0R1 490 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 PLEKHA5Q9HAU0 1116 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 PDE11AQ9HCR9 933 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 ARFGAP3Q9NP61 516 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 NMRK2Q9NPI5 230 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 AVENQ9NQS1 362 aaPredicted RBP8.52□□□□□ -1.05
VMA21-203ENST00000477649 SEPT11Q9NVA2 429 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms